BLASTX nr result

ID: Bupleurum21_contig00020218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020218
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   284   1e-74
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   276   3e-72
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              276   3e-72
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   276   3e-72
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   257   1e-66

>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  284 bits (726), Expect = 1e-74
 Identities = 143/200 (71%), Positives = 162/200 (81%), Gaps = 1/200 (0%)
 Frame = +1

Query: 4   FVKGEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSC 183
           F+ G D    +SDH ARIT MRL+ L+ETS+FRSETQ  E VLVTSS DH+IRLWWKGSC
Sbjct: 134 FLNGRDGVTALSDHNARITCMRLFPLSETSLFRSETQRKENVLVTSSCDHSIRLWWKGSC 193

Query: 184 QRCFRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHG 363
           QRCFRGH G V TLSDKLLG+G+ KV+ASGG DGTVRLWSLSSSGKRGQHALKATLYGH 
Sbjct: 194 QRCFRGHNGPVLTLSDKLLGDGSAKVLASGGEDGTVRLWSLSSSGKRGQHALKATLYGHE 253

Query: 364 NPLVLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETL 540
            P+ LMSVAGH+TSLL ++S DSKVR+WDTTT         VGM S+PG PV +KC E+L
Sbjct: 254 KPIKLMSVAGHRTSLLATISKDSKVRVWDTTTSSAVRSSCCVGMTSVPGAPVDVKCCESL 313

Query: 541 LFVAAGSSAAAIDLRTMKKV 600
           L+VAAGSS  AIDLRTM+KV
Sbjct: 314 LYVAAGSSVVAIDLRTMQKV 333


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  276 bits (705), Expect = 3e-72
 Identities = 139/197 (70%), Positives = 161/197 (81%), Gaps = 1/197 (0%)
 Frame = +1

Query: 13  GEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRC 192
           G D  + ++DH ARIT MRL+ L+ETS+FRSETQ  E VLVTSS DH+IRLWWKGSCQRC
Sbjct: 133 GRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQRC 192

Query: 193 FRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPL 372
           FRGH G V+TLSDKLLG+G+ KV ASGG DGTVRLWSLSSSGKRGQ ALKATLYGH  P+
Sbjct: 193 FRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAKPV 252

Query: 373 VLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETLLFV 549
            LM+VAGHKTSLLV++S DSKVR+WDTTT         VGM S+ G PV +KC+E+LLFV
Sbjct: 253 KLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFV 312

Query: 550 AAGSSAAAIDLRTMKKV 600
           AAGSS + IDLRTM++V
Sbjct: 313 AAGSSVSTIDLRTMQRV 329


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  276 bits (705), Expect = 3e-72
 Identities = 139/197 (70%), Positives = 161/197 (81%), Gaps = 1/197 (0%)
 Frame = +1

Query: 13  GEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRC 192
           G D  + ++DH ARIT MRL+ L+ETS+FRSETQ  E VLVTSS DH+IRLWWKGSCQRC
Sbjct: 130 GRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQRC 189

Query: 193 FRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPL 372
           FRGH G V+TLSDKLLG+G+ KV ASGG DGTVRLWSLSSSGKRGQ ALKATLYGH  P+
Sbjct: 190 FRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAKPV 249

Query: 373 VLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETLLFV 549
            LM+VAGHKTSLLV++S DSKVR+WDTTT         VGM S+ G PV +KC+E+LLFV
Sbjct: 250 KLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFV 309

Query: 550 AAGSSAAAIDLRTMKKV 600
           AAGSS + IDLRTM++V
Sbjct: 310 AAGSSVSTIDLRTMQRV 326


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  276 bits (705), Expect = 3e-72
 Identities = 139/197 (70%), Positives = 161/197 (81%), Gaps = 1/197 (0%)
 Frame = +1

Query: 13  GEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRC 192
           G D  + ++DH ARIT MRL+ L+ETS+FRSETQ  E VLVTSS DH+IRLWWKGSCQRC
Sbjct: 130 GRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQRC 189

Query: 193 FRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPL 372
           FRGH G V+TLSDKLLG+G+ KV ASGG DGTVRLWSLSSSGKRGQ ALKATLYGH  P+
Sbjct: 190 FRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAKPV 249

Query: 373 VLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETLLFV 549
            LM+VAGHKTSLLV++S DSKVR+WDTTT         VGM S+ G PV +KC+E+LLFV
Sbjct: 250 KLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFV 309

Query: 550 AAGSSAAAIDLRTMKKV 600
           AAGSS + IDLRTM++V
Sbjct: 310 AAGSSVSTIDLRTMQRV 326


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  257 bits (657), Expect = 1e-66
 Identities = 134/198 (67%), Positives = 154/198 (77%), Gaps = 4/198 (2%)
 Frame = +1

Query: 19  DSFLVMSDHYARITSMRLYDLNE-TSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRCF 195
           D F  +  H ARIT MRL+ LNE TS+FR +TQG + VLVTSS DH+IRLWWKGS  RCF
Sbjct: 145 DFFHSLCYHKARITCMRLFPLNEMTSVFRGDTQGEQNVLVTSSCDHSIRLWWKGSSLRCF 204

Query: 196 RGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPLV 375
           RGH G V +LS+KLLGE   KV+ASGG DGTVRLWSL SSGKRGQ ALKAT YGH  P+ 
Sbjct: 205 RGHNGPVLSLSNKLLGEDGSKVLASGGEDGTVRLWSLGSSGKRGQRALKATFYGHEKPVN 264

Query: 376 LMSVAGHKTSLLVSMSTDSKVRLWDT---TTLXXXXXXXVGMASLPGVPVGLKCHETLLF 546
           LMSVAGHKTSLLV++S DSKVR+WDT   T+        VGMAS+PG P+ +KCHE+LL+
Sbjct: 265 LMSVAGHKTSLLVTISRDSKVRVWDTGTATSSAVRTSCCVGMASVPGTPLNMKCHESLLY 324

Query: 547 VAAGSSAAAIDLRTMKKV 600
           VAAGSS AA DLRTM+KV
Sbjct: 325 VAAGSSVAAFDLRTMQKV 342


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