BLASTX nr result
ID: Bupleurum21_contig00020218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00020218 (612 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g... 284 1e-74 ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c... 276 3e-72 emb|CBI22162.3| unnamed protein product [Vitis vinifera] 276 3e-72 emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera] 276 3e-72 ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly... 257 1e-66 >ref|XP_002324039.1| f-box family protein [Populus trichocarpa] gi|222867041|gb|EEF04172.1| f-box family protein [Populus trichocarpa] Length = 498 Score = 284 bits (726), Expect = 1e-74 Identities = 143/200 (71%), Positives = 162/200 (81%), Gaps = 1/200 (0%) Frame = +1 Query: 4 FVKGEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSC 183 F+ G D +SDH ARIT MRL+ L+ETS+FRSETQ E VLVTSS DH+IRLWWKGSC Sbjct: 134 FLNGRDGVTALSDHNARITCMRLFPLSETSLFRSETQRKENVLVTSSCDHSIRLWWKGSC 193 Query: 184 QRCFRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHG 363 QRCFRGH G V TLSDKLLG+G+ KV+ASGG DGTVRLWSLSSSGKRGQHALKATLYGH Sbjct: 194 QRCFRGHNGPVLTLSDKLLGDGSAKVLASGGEDGTVRLWSLSSSGKRGQHALKATLYGHE 253 Query: 364 NPLVLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETL 540 P+ LMSVAGH+TSLL ++S DSKVR+WDTTT VGM S+PG PV +KC E+L Sbjct: 254 KPIKLMSVAGHRTSLLATISKDSKVRVWDTTTSSAVRSSCCVGMTSVPGAPVDVKCCESL 313 Query: 541 LFVAAGSSAAAIDLRTMKKV 600 L+VAAGSS AIDLRTM+KV Sbjct: 314 LYVAAGSSVVAIDLRTMQKV 333 >ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera] Length = 494 Score = 276 bits (705), Expect = 3e-72 Identities = 139/197 (70%), Positives = 161/197 (81%), Gaps = 1/197 (0%) Frame = +1 Query: 13 GEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRC 192 G D + ++DH ARIT MRL+ L+ETS+FRSETQ E VLVTSS DH+IRLWWKGSCQRC Sbjct: 133 GRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQRC 192 Query: 193 FRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPL 372 FRGH G V+TLSDKLLG+G+ KV ASGG DGTVRLWSLSSSGKRGQ ALKATLYGH P+ Sbjct: 193 FRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAKPV 252 Query: 373 VLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETLLFV 549 LM+VAGHKTSLLV++S DSKVR+WDTTT VGM S+ G PV +KC+E+LLFV Sbjct: 253 KLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFV 312 Query: 550 AAGSSAAAIDLRTMKKV 600 AAGSS + IDLRTM++V Sbjct: 313 AAGSSVSTIDLRTMQRV 329 >emb|CBI22162.3| unnamed protein product [Vitis vinifera] Length = 491 Score = 276 bits (705), Expect = 3e-72 Identities = 139/197 (70%), Positives = 161/197 (81%), Gaps = 1/197 (0%) Frame = +1 Query: 13 GEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRC 192 G D + ++DH ARIT MRL+ L+ETS+FRSETQ E VLVTSS DH+IRLWWKGSCQRC Sbjct: 130 GRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQRC 189 Query: 193 FRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPL 372 FRGH G V+TLSDKLLG+G+ KV ASGG DGTVRLWSLSSSGKRGQ ALKATLYGH P+ Sbjct: 190 FRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAKPV 249 Query: 373 VLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETLLFV 549 LM+VAGHKTSLLV++S DSKVR+WDTTT VGM S+ G PV +KC+E+LLFV Sbjct: 250 KLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFV 309 Query: 550 AAGSSAAAIDLRTMKKV 600 AAGSS + IDLRTM++V Sbjct: 310 AAGSSVSTIDLRTMQRV 326 >emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera] Length = 491 Score = 276 bits (705), Expect = 3e-72 Identities = 139/197 (70%), Positives = 161/197 (81%), Gaps = 1/197 (0%) Frame = +1 Query: 13 GEDSFLVMSDHYARITSMRLYDLNETSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRC 192 G D + ++DH ARIT MRL+ L+ETS+FRSETQ E VLVTSS DH+IRLWWKGSCQRC Sbjct: 130 GRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWWKGSCQRC 189 Query: 193 FRGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPL 372 FRGH G V+TLSDKLLG+G+ KV ASGG DGTVRLWSLSSSGKRGQ ALKATLYGH P+ Sbjct: 190 FRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSSSGKRGQQALKATLYGHAKPV 249 Query: 373 VLMSVAGHKTSLLVSMSTDSKVRLWDTTT-LXXXXXXXVGMASLPGVPVGLKCHETLLFV 549 LM+VAGHKTSLLV++S DSKVR+WDTTT VGM S+ G PV +KC+E+LLFV Sbjct: 250 KLMTVAGHKTSLLVTISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFV 309 Query: 550 AAGSSAAAIDLRTMKKV 600 AAGSS + IDLRTM++V Sbjct: 310 AAGSSVSTIDLRTMQRV 326 >ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max] Length = 501 Score = 257 bits (657), Expect = 1e-66 Identities = 134/198 (67%), Positives = 154/198 (77%), Gaps = 4/198 (2%) Frame = +1 Query: 19 DSFLVMSDHYARITSMRLYDLNE-TSIFRSETQGNEKVLVTSSHDHTIRLWWKGSCQRCF 195 D F + H ARIT MRL+ LNE TS+FR +TQG + VLVTSS DH+IRLWWKGS RCF Sbjct: 145 DFFHSLCYHKARITCMRLFPLNEMTSVFRGDTQGEQNVLVTSSCDHSIRLWWKGSSLRCF 204 Query: 196 RGHIGSVTTLSDKLLGEGTEKVIASGGVDGTVRLWSLSSSGKRGQHALKATLYGHGNPLV 375 RGH G V +LS+KLLGE KV+ASGG DGTVRLWSL SSGKRGQ ALKAT YGH P+ Sbjct: 205 RGHNGPVLSLSNKLLGEDGSKVLASGGEDGTVRLWSLGSSGKRGQRALKATFYGHEKPVN 264 Query: 376 LMSVAGHKTSLLVSMSTDSKVRLWDT---TTLXXXXXXXVGMASLPGVPVGLKCHETLLF 546 LMSVAGHKTSLLV++S DSKVR+WDT T+ VGMAS+PG P+ +KCHE+LL+ Sbjct: 265 LMSVAGHKTSLLVTISRDSKVRVWDTGTATSSAVRTSCCVGMASVPGTPLNMKCHESLLY 324 Query: 547 VAAGSSAAAIDLRTMKKV 600 VAAGSS AA DLRTM+KV Sbjct: 325 VAAGSSVAAFDLRTMQKV 342