BLASTX nr result

ID: Bupleurum21_contig00020163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020163
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16596.3| unnamed protein product [Vitis vinifera]              563   e-158
ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex su...   561   e-157
ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...   561   e-157
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su...   558   e-156
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   557   e-156

>emb|CBI16596.3| unnamed protein product [Vitis vinifera]
          Length = 2452

 Score =  563 bits (1451), Expect = e-158
 Identities = 295/492 (59%), Positives = 369/492 (75%), Gaps = 18/492 (3%)
 Frame = +3

Query: 3    QIRTQPISPASFNPADSLWNIYCGTISTFLKVLQANAGLISSNNLSEEIEKLSATVMH-- 176
            Q     +S +SF+ + ++ ++Y  T STFLKVL A+ GL++S+ LSEE+E+L  T+M   
Sbjct: 616  QFGAAQVSSSSFHHSGAIMDLYSETSSTFLKVLHAHTGLVTSSQLSEEMERLHVTIMRAN 675

Query: 177  ----------SSTADNCADDIETDVNSLFHQMFSGELEVDSVILMLTRYKESSEKRDQSL 326
                      SS +D  A+DIE + NS F QM+S +L VD+V+L L+++KESSEKR+Q +
Sbjct: 676  PKFQSCGATDSSISDRYAEDIEAESNSYFLQMYSCQLTVDAVVLKLSQFKESSEKREQLI 735

Query: 327  FECMIANLFEECKFFIKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPAD 506
            +ECMIANLFEECKFF KYPERQL+IAAVLFGS+I HQLVTHL+LGIALR VLDA+RKP D
Sbjct: 736  YECMIANLFEECKFFPKYPERQLRIAAVLFGSVISHQLVTHLSLGIALRYVLDAMRKPPD 795

Query: 507  SKMFIFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSEIIAFIERALARVSSSHSELD 686
            +KMF+FGTKALEQF DRL+EWPQYCNHILQISHLR TH +++AF+E+ LARVSS H E D
Sbjct: 796  AKMFVFGTKALEQFADRLVEWPQYCNHILQISHLRNTHPDLVAFVEQTLARVSSGHLESD 855

Query: 687  LGHVAAVEHH---QNSIPAVEGTSLPLTGHRGAQITPQVSTPVQLQERQHNSLEERHKAS 857
             G+ +  +HH   Q +   +E ++  L     + I P   + + LQ R  +SL++RHKAS
Sbjct: 856  GGNNSDDQHHGSTQLTSVNMEMSASSLQSLGASSIQPGQPSSLPLQHRLQSSLDDRHKAS 915

Query: 858  LPLSSYPKPALSSA---IKXXXXXXXXXXXXXXXANASAALPSSTGFVRPSRPANSTRFG 1028
            + LS+  KP ++ A   +                 NA A + SS G +RP R   STRFG
Sbjct: 916  VTLSNSTKPLVAPAGEPLVASSGDATSIDKSLNSINAPATVSSSPGSIRPLRGITSTRFG 975

Query: 1029 SALSIETLIAASERRETPIQVPTSEIQDKISFIINNLSPANEEAKAKEFSEYLKEQFYPW 1208
            SA++IETL+AASERRETPI+ P  EIQDKISFIINN+S AN EAKAKEF+E  KEQ+YPW
Sbjct: 976  SAMNIETLVAASERRETPIEAPALEIQDKISFIINNISAANVEAKAKEFTEIFKEQYYPW 1035

Query: 1209 FAQYLVMRRASIEPNFHDLYIKFLDKVNSKSLNKEIMQASYENCKVLLGSELIKSSVEER 1388
            FAQY+VM+RASIEPNFHDLY+KFLDKVNSK+LNKEI+QA+YENC+VLLGSELIKSS EER
Sbjct: 1036 FAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCRVLLGSELIKSSSEER 1095

Query: 1389 SLLKNLGSWLGK 1424
            SLLKNLGSWLGK
Sbjct: 1096 SLLKNLGSWLGK 1107


>ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 2333

 Score =  561 bits (1445), Expect = e-157
 Identities = 293/485 (60%), Positives = 366/485 (75%), Gaps = 15/485 (3%)
 Frame = +3

Query: 15   QPISPASFNPADSLWNIYCGTISTFLKVLQANAGLISSNNLSEEIEKLSATVMH------ 176
            +  S +SF+ + ++ ++Y  T STFLKVL A+ GL++S+ LSEE+E+L  T+M       
Sbjct: 576  EEFSSSSFHHSGAIMDLYSETSSTFLKVLHAHTGLVTSSQLSEEMERLHVTIMRANPKFQ 635

Query: 177  ------SSTADNCADDIETDVNSLFHQMFSGELEVDSVILMLTRYKESSEKRDQSLFECM 338
                  SS +D  A+DIE + NS F QM+S +L VD+V+L L+++KESSEKR+Q ++ECM
Sbjct: 636  SCGATDSSISDRYAEDIEAESNSYFLQMYSCQLTVDAVVLKLSQFKESSEKREQLIYECM 695

Query: 339  IANLFEECKFFIKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKMF 518
            IANLFEECKFF KYPERQL+IAAVLFGS+I HQLVTHL+LGIALR VLDA+RKP D+KMF
Sbjct: 696  IANLFEECKFFPKYPERQLRIAAVLFGSVISHQLVTHLSLGIALRYVLDAMRKPPDAKMF 755

Query: 519  IFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSEIIAFIERALARVSSSHSELDLGHV 698
            +FGTKALEQF DRL+EWPQYCNHILQISHLR TH +++AF+E+ LARVSS H E D G+ 
Sbjct: 756  VFGTKALEQFADRLVEWPQYCNHILQISHLRNTHPDLVAFVEQTLARVSSGHLESDGGNN 815

Query: 699  AAVEHHQNSIPAVEGTSLPLTGHRGAQITPQVSTPVQLQERQHNSLEERHKASLPLSSYP 878
            +  +HH ++        +     RG+ I P   + + LQ R  +SL++RHKAS+ LS+  
Sbjct: 816  SDDQHHGSTQLTSVNMEIISWNIRGS-IQPGQPSSLPLQHRLQSSLDDRHKASVTLSNST 874

Query: 879  KPALSSA---IKXXXXXXXXXXXXXXXANASAALPSSTGFVRPSRPANSTRFGSALSIET 1049
            KP ++ A   +                 NA A + SS G +RP R   STRFGSA++IET
Sbjct: 875  KPLVAPAGEPLVASSGDATSIDKSLNSINAPATVSSSPGSIRPLRGITSTRFGSAMNIET 934

Query: 1050 LIAASERRETPIQVPTSEIQDKISFIINNLSPANEEAKAKEFSEYLKEQFYPWFAQYLVM 1229
            L+AASERRETPI+ P  EIQDKISFIINN+S AN EAKAKEF+E  KEQ+YPWFAQY+VM
Sbjct: 935  LVAASERRETPIEAPALEIQDKISFIINNISAANVEAKAKEFTEIFKEQYYPWFAQYMVM 994

Query: 1230 RRASIEPNFHDLYIKFLDKVNSKSLNKEIMQASYENCKVLLGSELIKSSVEERSLLKNLG 1409
            +RASIEPNFHDLY+KFLDKVNSK+LNKEI+QA+YENC+VLLGSELIKSS EERSLLKNLG
Sbjct: 995  KRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCRVLLGSELIKSSSEERSLLKNLG 1054

Query: 1410 SWLGK 1424
            SWLGK
Sbjct: 1055 SWLGK 1059


>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score =  561 bits (1445), Expect = e-157
 Identities = 302/484 (62%), Positives = 357/484 (73%), Gaps = 13/484 (2%)
 Frame = +3

Query: 15   QPISPASFNPADSLWNIYCGTISTFLKVLQANAGLISSNNLSEEIEKLSATVMHS----- 179
            +  S   F+ A S+ NIY    S FLKVL+A  GLI S+ LS+E+E+L  T+  S     
Sbjct: 578  EEFSSKPFHHASSVVNIYMEASSIFLKVLKAQTGLIISSQLSDEMERLHITITDSNPRLQ 637

Query: 180  -------STADNCADDIETDVNSLFHQMFSGELEVDSVILMLTRYKESSEKRDQSLFECM 338
                   ST +  +DD+E + NS FHQMFSG+L +++++ ML R+KES  +R+Q +FECM
Sbjct: 638  NGGSADSSTPEPFSDDVEAEANSYFHQMFSGQLTIEAMVQMLARFKESPVRREQLIFECM 697

Query: 339  IANLFEECKFFIKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKMF 518
            I NLFEE +FF KYPERQLKIAAVLFGS+IKHQLVTHLTLGIALR VLDALRKP DSKMF
Sbjct: 698  IGNLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPPDSKMF 757

Query: 519  IFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSEIIAFIERALARVSSSHSELDLGHV 698
            IFGTKAL+QFVDRLIEWPQYCNHILQISHLR THSEI++FIER LAR+SS H E D G+ 
Sbjct: 758  IFGTKALDQFVDRLIEWPQYCNHILQISHLRTTHSEIVSFIERQLARISSGHLESD-GNN 816

Query: 699  AAVEHHQNSIPAVEGTSLPLTGHRGAQITPQVSTPVQLQERQHNSLEERHKASLPLSSYP 878
             +  HH     A  G    L      Q   Q+S+ + +Q+R  + L+ERHK  L  S+  
Sbjct: 817  GSASHHHGLSQASSGNG-ELISVNIPQSVQQLSSTLNVQQRHESPLDERHKVFLASSNDT 875

Query: 879  KPALSS-AIKXXXXXXXXXXXXXXXANASAALPSSTGFVRPSRPANSTRFGSALSIETLI 1055
            K  LSS                   A A+A L SS GF+RPSR   ST+FGSAL+I TL 
Sbjct: 876  KSVLSSGGQSSVAPLSDNSIAQKSAAGATAMLSSSHGFIRPSRGVTSTKFGSALNIGTLE 935

Query: 1056 AASERRETPIQVPTSEIQDKISFIINNLSPANEEAKAKEFSEYLKEQFYPWFAQYLVMRR 1235
            AA+ERRETPI+ P SEIQDKISFIINN+S AN EAKAKEF+E LKEQ+YPWFAQY+VM+R
Sbjct: 936  AAAERRETPIEAPASEIQDKISFIINNISAANIEAKAKEFTEILKEQYYPWFAQYMVMKR 995

Query: 1236 ASIEPNFHDLYIKFLDKVNSKSLNKEIMQASYENCKVLLGSELIKSSVEERSLLKNLGSW 1415
            ASIEPNFHDLY+KFLDKV+SK+LNKEI+QA+YENCKVLLGSELIKSS EERSLLKNLGSW
Sbjct: 996  ASIEPNFHDLYLKFLDKVSSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSW 1055

Query: 1416 LGKL 1427
            LGKL
Sbjct: 1056 LGKL 1059


>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2327

 Score =  558 bits (1438), Expect = e-156
 Identities = 297/485 (61%), Positives = 369/485 (76%), Gaps = 16/485 (3%)
 Frame = +3

Query: 21   ISPASFNPADSLWNIYCGTISTFLKVLQANAGLISSNNLSEEIEKLSATVMH-------- 176
            +S  SF+ + ++ ++Y    +T LKVL+++  L++S  LSEE+E+L  +++         
Sbjct: 586  LSGKSFHQSGAILSLYAEAAATILKVLKSHTDLVASRQLSEELERLHVSIIDTNPRLQNG 645

Query: 177  ----SSTADNCADDIETDVNSLFHQMFSGELEVDSVILMLTRYKESSEKRDQSLFECMIA 344
                SST+D  ADDIE + NS FHQMFS +L +++++ ML R+KESS KR++S+FECMIA
Sbjct: 646  GTADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECMIA 705

Query: 345  NLFEECKFFIKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKMFIF 524
            NLFEE +FF KYPERQLKIAAVLFGS+IKHQLVTHL+LGIALR VLDALRKPADSKMF+F
Sbjct: 706  NLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLF 765

Query: 525  GTKALEQFVDRLIEWPQYCNHILQISHLRGTHSEIIAFIERALARVSSSHSELDLGHVAA 704
            G+ ALEQFVDRLIEWPQYCNHILQISHLR THSEI++FIE+ALAR+SS H ++D    A+
Sbjct: 766  GSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVSFIEQALARISSGHLDVDGASHAS 825

Query: 705  VEHHQNSIPAVEGTSLPLTGHRGAQITPQVSTPVQLQERQHNSLEERHKASLPLSSYPKP 884
            V  + +S  A  G  + L+G    Q   Q    +QLQ+R+ N L++RHKAS+  S+  KP
Sbjct: 826  VISNHHSAQATIG-HVELSGSSVIQ-PGQQHLSLQLQQRRENPLDDRHKASVGSSTDVKP 883

Query: 885  ALS----SAIKXXXXXXXXXXXXXXXANASAALPSSTGFVRPSRPANSTRFGSALSIETL 1052
             LS    S++                + +S    SS GFVRPSR   S RFGSAL+IETL
Sbjct: 884  LLSSLGKSSVLTPTDASSTNKLHSTVSTSSMLSSSSPGFVRPSRGTTSARFGSALNIETL 943

Query: 1053 IAASERRETPIQVPTSEIQDKISFIINNLSPANEEAKAKEFSEYLKEQFYPWFAQYLVMR 1232
            +AA+E+RE PI+ P SE+QDKI FIINN+S AN EAKAKEF+E LKEQ+YPWFAQY+VM+
Sbjct: 944  VAAAEKREIPIEAPGSEVQDKILFIINNVSAANVEAKAKEFTEILKEQYYPWFAQYMVMK 1003

Query: 1233 RASIEPNFHDLYIKFLDKVNSKSLNKEIMQASYENCKVLLGSELIKSSVEERSLLKNLGS 1412
            RASIEPNFHDLY+KFLDKVNSK+LNKEI+QA+YENCKVLLGSELIKSS EERSLLKNLGS
Sbjct: 1004 RASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGS 1063

Query: 1413 WLGKL 1427
            WLGKL
Sbjct: 1064 WLGKL 1068


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  557 bits (1436), Expect = e-156
 Identities = 300/499 (60%), Positives = 374/499 (74%), Gaps = 27/499 (5%)
 Frame = +3

Query: 12   TQPISPASFNPADSLWNIYCGTISTFLKVLQANAGLISSNNLSEEIEKLSATVMH----- 176
            +Q +S  SF+ + ++ ++Y    +T LKVL+++  L++S  LSEE+E+L  +++      
Sbjct: 597  SQNLSGKSFHQSGAVLSLYAEATATILKVLKSHTDLVASRQLSEELERLHISMIDTNPRL 656

Query: 177  -------SSTADNCADDIETDVNSLFHQMFSGELEVDSVILMLTRYKESSEKRDQSLFEC 335
                   SST+D  ADDIE + NS FHQMFS +L +++++ MLTR+KESS KR++S+FEC
Sbjct: 657  QNGGTADSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLTRFKESSVKREKSIFEC 716

Query: 336  MIANLFEECKFFIKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKM 515
            MIANLFEE +FF KYPERQLKIAAVLFGS+IKHQLVTHL+LGIALR VLDALRKPADSKM
Sbjct: 717  MIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKM 776

Query: 516  FIFGTKALEQFVDRLIEWPQYCNHILQISHLRGTHSEIIAFIERALARVSSSHSELD-LG 692
            F+FG+ ALEQFVDRLIEWPQYCNHILQISHLR THSEI+AFIE+ALAR+SS HS++D   
Sbjct: 777  FLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDVDGAS 836

Query: 693  HVAAVEHH---QNSIPAVEGTSLPLTGHRGAQIT-------PQVSTPVQLQERQHNSLEE 842
            H + + +H   Q S+  VE  +    G    Q++        Q    +QLQ+R+ N L++
Sbjct: 837  HASVISNHHSAQASLGHVEVVNDYSVGPIAVQLSGSSVIQPGQQHLSMQLQQRRENPLDD 896

Query: 843  RHKASLPLSSYPKPALS----SAIKXXXXXXXXXXXXXXXANASAALPSSTGFVRPSRPA 1010
            R KAS+  S+  KP LS    S++                + +S    SS GFVRPSR  
Sbjct: 897  RLKASVGSSTDVKPLLSSLGQSSVLTPTDASSTNKLHSTVSTSSMLSSSSPGFVRPSRGT 956

Query: 1011 NSTRFGSALSIETLIAASERRETPIQVPTSEIQDKISFIINNLSPANEEAKAKEFSEYLK 1190
             S RFGSAL+IETL+AA+E+RE PI+ P SE+QDKI FIINN+S AN EAKAKEF+E LK
Sbjct: 957  TSARFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSAANIEAKAKEFTEILK 1016

Query: 1191 EQFYPWFAQYLVMRRASIEPNFHDLYIKFLDKVNSKSLNKEIMQASYENCKVLLGSELIK 1370
            EQ+YPWFAQY+VM+RASIEPNFHDLY+KFLDKVNSK+LNKEI+QA+YENCKVLLGSELIK
Sbjct: 1017 EQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIK 1076

Query: 1371 SSVEERSLLKNLGSWLGKL 1427
            SS EERSLLKNLGSWLGKL
Sbjct: 1077 SSSEERSLLKNLGSWLGKL 1095


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