BLASTX nr result

ID: Bupleurum21_contig00020117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020117
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521322.1| protein with unknown function [Ricinus commu...   132   5e-29
ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   129   4e-28
ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycin...   127   2e-27
ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   126   2e-27
gb|ABA81859.1| unknown [Solanum tuberosum]                            125   3e-27

>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  132 bits (331), Expect = 5e-29
 Identities = 67/92 (72%), Positives = 76/92 (82%)
 Frame = -3

Query: 558 LSIQSKVNSSFSQPPPREVLLELARMRNKIPLPKSISGPGVALPSEEDTLISPNYQLAIP 379
           L+IQSKVN SFSQPPPREVLLELAR RNKIPLPKSI+GPG+ LP E+DTLISPNYQLAIP
Sbjct: 69  LAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLISPNYQLAIP 128

Query: 378 NKQTRQDVEETEDEEIADPDPKATPEPKAHVP 283
            KQ+ Q  EETE++E    DP ++ EPK  VP
Sbjct: 129 KKQSVQATEETEEDE-ESADPNSSQEPKTDVP 159


>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  129 bits (323), Expect = 4e-28
 Identities = 68/96 (70%), Positives = 77/96 (80%), Gaps = 10/96 (10%)
 Frame = -3

Query: 558 LSIQSKVNSSFSQPPPREVLLELARMRNKIPLPKSISGPGVALPSEEDTLISPNYQLAIP 379
           L+IQSKVN SFSQPPPREVLLELAR RNKIPLPKSI+GPG+ LP E+DTLISPNYQLAIP
Sbjct: 69  LAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNYQLAIP 128

Query: 378 NKQTRQDVEET-EDEEIADPD---------PKATPE 301
            K+T Q +EET EDEE ADP+         P+ TP+
Sbjct: 129 KKRTAQAIEETEEDEESADPNQSQEQKTDPPQLTPQ 164


>ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycine max]
           gi|255628079|gb|ACU14384.1| unknown [Glycine max]
          Length = 177

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/94 (67%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
 Frame = -3

Query: 558 LSIQSKVNSSFSQPPPREVLLELARMRNKIPLPKSISGPGVALPSEEDTLISPNYQLAIP 379
           L+IQSKVN SFSQPPPREVLLELA+ RNKIPLPK+I+GPG+ LP ++DTLISPNYQ AIP
Sbjct: 71  LAIQSKVNFSFSQPPPREVLLELAQNRNKIPLPKTIAGPGIPLPPDQDTLISPNYQFAIP 130

Query: 378 NKQTRQDVEETEDEEIADPDP----KATPEPKAH 289
           NK+  Q +EETEDEE   P+P    K   +P  H
Sbjct: 131 NKRPAQPLEETEDEEATIPNPSQEQKVDTQPNPH 164


>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  126 bits (317), Expect = 2e-27
 Identities = 78/145 (53%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
 Frame = -3

Query: 558 LSIQSKVNSSFSQPPPREVLLELARMRNKIPLPKSISGPGVALPSEEDTLISPNYQLAIP 379
           L+IQSKVN SFSQPP REVLLELAR RNKIPLPKSI+GPG+ LP E+DTLISPNYQLAIP
Sbjct: 69  LAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNYQLAIP 128

Query: 378 NKQTRQDVEET-EDEEIADPDPKATPEPKAHVPXXXXXXXXXXXXXXXXXXXXXXXXXXX 202
            K+T Q VEET EDEE ADP   A+ E +  +P                           
Sbjct: 129 KKRTAQAVEETEEDEEGADPS-HASQEGRTDLP--------------------------- 160

Query: 201 XXXXXXXXXXXSQHVSFSLGAKRPR 127
                       Q VSF +GAKRPR
Sbjct: 161 --------QHTPQRVSFPIGAKRPR 177


>gb|ABA81859.1| unknown [Solanum tuberosum]
          Length = 217

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/87 (73%), Positives = 70/87 (80%)
 Frame = -3

Query: 558 LSIQSKVNSSFSQPPPREVLLELARMRNKIPLPKSISGPGVALPSEEDTLISPNYQLAIP 379
           L+IQSKVN SFSQPPPREVLLELAR RNKIPLPKSI+G GV LP E+DTLI+PNYQLAI 
Sbjct: 70  LAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGSGVPLPPEQDTLINPNYQLAIA 129

Query: 378 NKQTRQDVEETEDEEIADPDPKATPEP 298
            KQT Q  E  EDEE ADP+P  +  P
Sbjct: 130 KKQTSQPEETEEDEERADPNPAPSKNP 156


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