BLASTX nr result

ID: Bupleurum21_contig00020048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020048
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   186   4e-45
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   167   1e-39
ref|XP_002527529.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...   148   8e-34
ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...   147   1e-33

>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  186 bits (471), Expect = 4e-45
 Identities = 86/187 (45%), Positives = 120/187 (64%)
 Frame = -2

Query: 570  WRYTGFYGCPERGRRRESWEILRMLSTKSNLPWCIIGDFNDMMYLDEKRGGRAQPQSLLK 391
            +R TGFYG   R +R  SWEILR L    +LPWC+IGDFN++M+  EK G    P SL++
Sbjct: 441  FRLTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQSEKCGNHPHPGSLIE 500

Query: 390  GFTEAVTDCGLIDLGFVGEKYTWEKSRGRHNWVQERLDRGLENQRWRDIFPQAEVKVLDV 211
             F + VT+CGL DLG+VG  YTWE+ RG   WV+ERLDR L +  W+ +F Q+ +  L V
Sbjct: 501  AFRQVVTNCGLSDLGYVGYAYTWERGRGTTRWVEERLDRALVSADWKHLFHQSRLIHLFV 560

Query: 210  ATSDHLPLHLQLNKPVYIRKEKRFRFENIWLREKECMTVVKNGWENAAGLEIMEKIKFYG 31
            +TSDHLP+ L+L K V  +  +RF++EN W  E +C+ VV+  W      ++M K+    
Sbjct: 561  STSDHLPVLLELRKFVPRQSLRRFKYENSWSLEPQCVEVVRQSWGPNGDSDVMSKLVRCS 620

Query: 30   LRLQEWG 10
              L++WG
Sbjct: 621  KDLEDWG 627


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  167 bits (424), Expect = 1e-39
 Identities = 80/188 (42%), Positives = 110/188 (58%)
 Frame = -2

Query: 573 RWRYTGFYGCPERGRRRESWEILRMLSTKSNLPWCIIGDFNDMMYLDEKRGGRAQPQSLL 394
           +WR TGFYG P+R +R  SW +LR L + S+LPWC +GDFND++  +EKRG    P  L+
Sbjct: 405 QWRVTGFYGFPDRSQRHLSWNLLRSLYSASSLPWCCLGDFNDIVCNEEKRGSVPHPPWLI 464

Query: 393 KGFTEAVTDCGLIDLGFVGEKYTWEKSRGRHNWVQERLDRGLENQRWRDIFPQAEVKVLD 214
           +GF  A++DC L DL   G  +TWE+ RG  +WV+E LDR L N  W ++F  A++  L 
Sbjct: 465 RGFCAALSDCQLQDLXLKGYPFTWERGRGSSHWVEEXLDRALVNVSWLNLFXBAKLNNLV 524

Query: 213 VATSDHLPLHLQLNKPVYIRKEKRFRFENIWLREKECMTVVKNGWENAAGLEIMEKIKFY 34
              SDH P+ L          +  FRFEN WL+E     VV N W +     +++KI   
Sbjct: 525 APVSDHSPIELNTVDKFSCVYKHXFRFENGWLKEDGLDFVVSNAWRSPHAESLIDKIHTC 584

Query: 33  GLRLQEWG 10
              L+EWG
Sbjct: 585 SFALKEWG 592


>ref|XP_002527529.1| conserved hypothetical protein [Ricinus communis]
           gi|223533079|gb|EEF34838.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  152 bits (384), Expect = 4e-35
 Identities = 75/166 (45%), Positives = 102/166 (61%)
 Frame = -2

Query: 537 RGRRRESWEILRMLSTKSNLPWCIIGDFNDMMYLDEKRGGRAQPQSLLKGFTEAVTDCGL 358
           R RR+++W++LR L++ ++ PW ++GDFND++   EKRGG AQP  L++GF  AV D GL
Sbjct: 10  RNRRKDNWDLLRSLASINDSPWIVMGDFNDILNHREKRGGVAQPNWLVEGFRRAVWDSGL 69

Query: 357 IDLGFVGEKYTWEKSRGRHNWVQERLDRGLENQRWRDIFPQAEVKVLDVATSDHLPLHLQ 178
           +DLGF G  +TWE+ R    WVQERL+R L N  W      A V  LD   SDH P+ L 
Sbjct: 70  VDLGFQGCPFTWERGRESGLWVQERLNRMLGNGDWVARHKDARVVHLDSVVSDHFPIILH 129

Query: 177 LNKPVYIRKEKRFRFENIWLREKECMTVVKNGWENAAGLEIMEKIK 40
           L +    R  KRFRFEN+W    E   VV++ W    G+ I  +I+
Sbjct: 130 LYRVEGTRSSKRFRFENLWTNYGESEEVVRDSWNKEVGVSIQRRIR 175


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  148 bits (373), Expect = 8e-34
 Identities = 64/131 (48%), Positives = 89/131 (67%)
 Frame = -2

Query: 570 WRYTGFYGCPERGRRRESWEILRMLSTKSNLPWCIIGDFNDMMYLDEKRGGRAQPQSLLK 391
           WR+TG+YG P+R R+ ESW +LR LS +S LPW  +GD+NDM+  +EKRG    P S  +
Sbjct: 85  WRFTGYYGLPDRNRKMESWNLLRALSRQSALPWVCMGDYNDMLCAEEKRGRVLHPNSSFQ 144

Query: 390 GFTEAVTDCGLIDLGFVGEKYTWEKSRGRHNWVQERLDRGLENQRWRDIFPQAEVKVLDV 211
           GF EAV DC L D+  +G  +TWE+ RG   W+QER+DR + +  W D F +AE+ +L  
Sbjct: 145 GFREAVEDCKLTDMPLIGYPFTWERGRGTAEWIQERIDRAMCSDSWFDYFDRAELHILTC 204

Query: 210 ATSDHLPLHLQ 178
           ++SDH PL L+
Sbjct: 205 SSSDHSPLLLR 215


>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
           gi|241916322|gb|EER89466.1| hypothetical protein
           SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score =  147 bits (371), Expect = 1e-33
 Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 6/196 (3%)
 Frame = -2

Query: 582 QIGRWRYTGFYGCPERGRRRESWEILRMLSTKSNLPWCIIGDFNDMMYLDEKRGGRAQPQ 403
           Q   WR+TGFYG P R  R  SW+ L+ L+T+S LPW   GDFN+++   E+ GG+++ +
Sbjct: 362 QAPMWRFTGFYGEPRRELRGRSWDCLKFLNTQSELPWLCTGDFNEVLEAHEQFGGQSRSE 421

Query: 402 SLLKGFTEAVTDCGLIDLGFVGEKYTWEKSRGRHNWVQERLDRGLENQRWRDIFPQAEVK 223
             + GF EAV  CGL+DLGF+G  YTW+  +   N V+ RLDRGL N  + D+F   +V 
Sbjct: 422 RQMDGFREAVQVCGLMDLGFIGLPYTWDNRQEGINNVKVRLDRGLANPAFLDLFRDTKVW 481

Query: 222 VLDVATSDHLPLHLQL--NKPVYIRKEKRFRFENIWLREKECMTVVKNGW----ENAAGL 61
            +    SDH  L L+    KP   R  +RFR+EN+W R+      V++ W    + A+  
Sbjct: 482 HVQTTESDHCCLLLECFRAKPSGRRARRRFRYENMWRRDPSYTLAVESAWQEPDDQASMS 541

Query: 60  EIMEKIKFYGLRLQEW 13
           ++  ++   G  L +W
Sbjct: 542 QVANRLGELGRSLSDW 557


Top