BLASTX nr result

ID: Bupleurum21_contig00019994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019994
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328108.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002523853.1| conserved hypothetical protein [Ricinus comm...   107   1e-21
ref|NP_566392.1| uncharacterized protein [Arabidopsis thaliana] ...   105   3e-21
ref|XP_002313602.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002882738.1| hypothetical protein ARALYDRAFT_478504 [Arab...   105   5e-21

>ref|XP_002328108.1| predicted protein [Populus trichocarpa] gi|222837623|gb|EEE75988.1|
           predicted protein [Populus trichocarpa]
          Length = 649

 Score =  112 bits (279), Expect = 4e-23
 Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 36/208 (17%)
 Frame = -2

Query: 517 SLIAALKCEIDRIRAEVLKLIQAHEVEESENDRLKNKFAEERSMWKMKERERIHNAVKSI 338
           SL++AL+ E+DR    V +LI+      SE + L   F EE++ WK KER+RI +A+  I
Sbjct: 227 SLVSALRIELDRACISVNQLIREQRSNRSEIEYLVKHFEEEKAAWKSKERDRIRSAIACI 286

Query: 337 ARELQVEKKLKGQTERLNKKLGKELALTRASLLKLELKVDNAK----------------- 209
           A EL++E+KL+ QTERLNKKLGKELA T+ SL K   +++  K                 
Sbjct: 287 AEELEIERKLRRQTERLNKKLGKELADTKESLSKAMKELETEKRAKEILEQVCDELARGI 346

Query: 208 ----------SSEPTKFSKQVQKDNKMV---------KVYAKHSEDKSIRVKENNIAVVD 86
                       E  K   +V+K+ +M+         +V  K SE K    +E N A V+
Sbjct: 347 GDDRAEVEEMKKESAKVRDEVEKEREMLQLADVLREERVQMKLSEAK-YHFEEKN-AAVE 404

Query: 85  NLRSELETCLRARIAEQVEDYDSNNYDR 2
            LR+ELET LR ++ E+  D  S NYDR
Sbjct: 405 RLRNELETYLREKVGEKDGD-GSPNYDR 431


>ref|XP_002523853.1| conserved hypothetical protein [Ricinus communis]
           gi|223536941|gb|EEF38579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score =  107 bits (266), Expect = 1e-21
 Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 38/214 (17%)
 Frame = -2

Query: 529 SITKSLIAALKCEIDRIRAEVLKLIQAHEVEESENDRLKNKFAEERSMWKMKERERIHNA 350
           S T +L++AL+ E+DR R +V ++I+  +   +E + L   F EE++ WK KER+RI NA
Sbjct: 221 SSTMALVSALRVELDRARVQVDRVIKDQQSNRNEIEYLVKHFEEEKAAWKGKERDRIRNA 280

Query: 349 VKSIARELQVEKKLKGQTERLNKKLGKELALTRASLLKLELKVDNAKSS----------- 203
           +  ++ EL+VEKKL+ QTERLNKKLG ELA T+ASL +   ++++ K +           
Sbjct: 281 IACVSEELEVEKKLRRQTERLNKKLGLELADTKASLSQALKELESEKRAKEILEQVCDEL 340

Query: 202 ----------------EPTKFSKQVQKDNKMVKVYAKHSEDKSIRVK--------ENNIA 95
                           E  K  ++V+K+ +M+++ A    ++ +++K        E   A
Sbjct: 341 ARGIGQDRAEVEELKRESAKVKEEVEKEREMLQL-ADVLREERVQMKLSEARYHFEEKNA 399

Query: 94  VVDNLRSELETCLRARIAEQVEDYDSN---NYDR 2
            V+ LR ELE  L+ ++  + E+ D N   NY+R
Sbjct: 400 AVERLRHELEAYLQEKVVSK-ENGDGNGSPNYER 432


>ref|NP_566392.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12322915|gb|AAG51453.1|AC008153_26 unknown protein;
           103163-106072 [Arabidopsis thaliana]
           gi|25090217|gb|AAN72254.1| At3g11590/F24K9_26
           [Arabidopsis thaliana] gi|332641549|gb|AEE75070.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 622

 Score =  105 bits (263), Expect = 3e-21
 Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 36/197 (18%)
 Frame = -2

Query: 529 SITKSLIAALKCEIDRIRAEVLKLIQAHEVEESENDRLKNKFAEERSMWKMKERERIHNA 350
           S + SL++AL  E++R R +V +LI  H+ E ++   L  +FAEE+++WK  E+E +  A
Sbjct: 251 SSSMSLVSALHSELERARLQVNQLIHEHKPENNDISYLMKRFAEEKAVWKSNEQEVVEAA 310

Query: 349 VKSIARELQVEKKLKGQTERLNKKLGKELALTRASLLKLELKVDNAKSS----------- 203
           ++S+A EL+VE+KL+ + E LNKKLGKELA T+++L+K   +++N K +           
Sbjct: 311 IESVAGELEVERKLRRRFESLNKKLGKELAETKSALMKAVKEIENEKRARVMVEKVCDEL 370

Query: 202 ----------------EPTKFSKQVQKDNKMV---------KVYAKHSEDKSIRVKENNI 98
                           E  K  ++V+K+ +M+         +V  K SE K  +++E N 
Sbjct: 371 ARDISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAKH-QLEEKN- 428

Query: 97  AVVDNLRSELETCLRAR 47
           A VD LR++L+T L+A+
Sbjct: 429 AAVDKLRNQLQTYLKAK 445


>ref|XP_002313602.1| predicted protein [Populus trichocarpa] gi|222850010|gb|EEE87557.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  105 bits (262), Expect = 4e-21
 Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 35/207 (16%)
 Frame = -2

Query: 517 SLIAALKCEIDRIRAEVLKLIQAHEVEESENDRLKNKFAEERSMWKMKERERIHNAVKSI 338
           SL++AL+ E++R    V +LI+ H    +E +     F EE++ WK KER+RI NA+  I
Sbjct: 52  SLVSALRIELNRACILVNQLIKEHRSNHNEIEYRIKHFEEEKAAWKSKERDRIRNAIACI 111

Query: 337 ARELQVEKKLKGQTERLNKKLGKELALTRASLLKLELKVDNAK----------------- 209
           A EL+VE+KL+ QTERLNKKLGKELA T+ SL K   ++++ K                 
Sbjct: 112 AEELEVERKLRRQTERLNKKLGKELADTKVSLSKAVKELESEKRAKEILEQVCDELARGI 171

Query: 208 ----------SSEPTKFSKQVQKDNKMVKVYAKHSEDKSIRVK--------ENNIAVVDN 83
                       E  K  ++V+K+ +M+++ A    ++ +++K        E   A V+ 
Sbjct: 172 GEDRAAVEEMKKESAKVREEVEKEREMLQL-ADVLREERVQMKLCEAKYHFEEKNAAVER 230

Query: 82  LRSELETCLRARIAEQVEDYDSNNYDR 2
           LR+ELET L+ +   +  D  S NY+R
Sbjct: 231 LRNELETYLKEKAGAENGD-GSPNYER 256


>ref|XP_002882738.1| hypothetical protein ARALYDRAFT_478504 [Arabidopsis lyrata subsp.
           lyrata] gi|297328578|gb|EFH58997.1| hypothetical protein
           ARALYDRAFT_478504 [Arabidopsis lyrata subsp. lyrata]
          Length = 621

 Score =  105 bits (261), Expect = 5e-21
 Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 36/197 (18%)
 Frame = -2

Query: 529 SITKSLIAALKCEIDRIRAEVLKLIQAHEVEESENDRLKNKFAEERSMWKMKERERIHNA 350
           S + SL++AL  E++R R +V +LI  H+ E ++   L  +FAEE++ WK  E+E +  A
Sbjct: 250 SSSMSLVSALHSELERARLQVNQLIHEHKPENNDISYLMKRFAEEKAAWKSNEQEVVEAA 309

Query: 349 VKSIARELQVEKKLKGQTERLNKKLGKELALTRASLLKLELKVDNAKSS----------- 203
           ++S+A EL+VE+KL+ + E LNKKLGKELA T+++L+K   +++N K +           
Sbjct: 310 IESVAGELEVERKLRRRFESLNKKLGKELAETKSALMKAVKEIENEKRARVMVEKVCDEL 369

Query: 202 ----------------EPTKFSKQVQKDNKMV---------KVYAKHSEDKSIRVKENNI 98
                           E  K  ++V+K+ +M+         +V  K SE K  +++E N 
Sbjct: 370 ARDISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAKH-QLEEKN- 427

Query: 97  AVVDNLRSELETCLRAR 47
           A VD LR++L+T L+A+
Sbjct: 428 ATVDKLRNQLQTYLKAK 444


Top