BLASTX nr result

ID: Bupleurum21_contig00019990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019990
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261...   139   7e-31
emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]   139   1e-30
ref|XP_002517130.1| conserved hypothetical protein [Ricinus comm...   121   2e-25
ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|2...   119   7e-25
ref|XP_002307592.1| predicted protein [Populus trichocarpa] gi|2...   116   8e-24

>ref|XP_002278578.1| PREDICTED: uncharacterized protein LOC100261343 [Vitis vinifera]
          Length = 223

 Score =  139 bits (351), Expect = 7e-31
 Identities = 74/156 (47%), Positives = 93/156 (59%)
 Frame = +3

Query: 315 STSTTLIKNFNSLYDLPXXXXXXXXXXADHXXXXXXXXXXXXXXXXXXXATVFASQRFFF 494
           STS+ LIKNFNSLYDL                                 ATVFASQRFFF
Sbjct: 47  STSSVLIKNFNSLYDLTSDSTSKSLTRTTDDFLSTSEDSVDSESPPDF-ATVFASQRFFF 105

Query: 495 SSPGRSNSIIDSPAGNPDHNTLVPDSIAIQTYSPDPLQDFRKSMQEMVEAHGIIDVKADW 674
           SSPGRSNSI ++    P+ +++V   +A+ TYSP+P +DFR+SMQEM EA  + DV ADW
Sbjct: 106 SSPGRSNSIFEASESPPESDSIVNGGVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADW 165

Query: 675 EFXXXXXXXXXXXNPKHTHKFIVNAFSDLLVSIMSS 782
           ++           NPKHTHKFI+ AF+DL+V +MSS
Sbjct: 166 DYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSS 201


>emb|CAN67178.1| hypothetical protein VITISV_037456 [Vitis vinifera]
          Length = 428

 Score =  139 bits (349), Expect = 1e-30
 Identities = 74/156 (47%), Positives = 92/156 (58%)
 Frame = +3

Query: 315 STSTTLIKNFNSLYDLPXXXXXXXXXXADHXXXXXXXXXXXXXXXXXXXATVFASQRFFF 494
           STS+ LIKNFNSLYDL                                 ATVFASQRFFF
Sbjct: 47  STSSILIKNFNSLYDLTSDSTSKSLTRTTDDFLSTSEDSVDSESPPDF-ATVFASQRFFF 105

Query: 495 SSPGRSNSIIDSPAGNPDHNTLVPDSIAIQTYSPDPLQDFRKSMQEMVEAHGIIDVKADW 674
           SSPGRSNSI ++    P+ + +V   +A+ TYSP+P +DFR+SMQEM EA  + DV ADW
Sbjct: 106 SSPGRSNSIFEASESPPESDAIVNGGVAVHTYSPNPYEDFRRSMQEMAEARELRDVAADW 165

Query: 675 EFXXXXXXXXXXXNPKHTHKFIVNAFSDLLVSIMSS 782
           ++           NPKHTHKFI+ AF+DL+V +MSS
Sbjct: 166 DYLHELLLCYLTLNPKHTHKFIIRAFADLIVCLMSS 201


>ref|XP_002517130.1| conserved hypothetical protein [Ricinus communis]
           gi|223543765|gb|EEF45293.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  121 bits (304), Expect = 2e-25
 Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
 Frame = +3

Query: 309 NQSTSTTLIKNFNSLYDLPXXXXXXXXXXADHXXXXXXXXXXXXXXXXXXXATVFASQRF 488
           + ST++ +IKN NSLYDL                                 A +FASQRF
Sbjct: 47  DSSTASIMIKNVNSLYDLSSASTSKSLSTPS-TYSFSSSSSGSDVDSPPDFAAIFASQRF 105

Query: 489 FFSSPGRSNSIIDSP-AGNPDHNTLVPDSIAIQTYSPDPLQDFRKSMQEMVEAHGIIDVK 665
           FFSSPGRSNSII+SP   + +  T +   +A++ YSPDP  DFR+SM EM+EA    DVK
Sbjct: 106 FFSSPGRSNSIIESPETPSAEPQTPLNGGVAVKKYSPDPYADFRQSMLEMIEARKPRDVK 165

Query: 666 ADWEFXXXXXXXXXXXNPKHTHKFIVNAFSDLLVSIMSSES 788
           ADW++           NPK THKFI++AF+D+++ +++S S
Sbjct: 166 ADWDYLHELLSCYLNLNPKQTHKFIISAFADIVICLLTSSS 206


>ref|XP_002312533.1| predicted protein [Populus trichocarpa] gi|222852353|gb|EEE89900.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  119 bits (299), Expect = 7e-25
 Identities = 69/168 (41%), Positives = 91/168 (54%)
 Frame = +3

Query: 318 TSTTLIKNFNSLYDLPXXXXXXXXXXADHXXXXXXXXXXXXXXXXXXXATVFASQRFFFS 497
           T++ +I+NFNS YDL                                 AT+ ASQR FFS
Sbjct: 45  TTSIIIQNFNSPYDLSSAPTSKSLSTPS-TNSFSSSYSDSDTESNLDFATILASQRLFFS 103

Query: 498 SPGRSNSIIDSPAGNPDHNTLVPDSIAIQTYSPDPLQDFRKSMQEMVEAHGIIDVKADWE 677
           SPGRSNSII+S    P+  T V   +AI+ YSPDP  DF+ SMQEM+EA  + DV+A W+
Sbjct: 104 SPGRSNSIIESL---PEPQTPVSGGVAIKKYSPDPYTDFKHSMQEMIEARELRDVRAKWD 160

Query: 678 FXXXXXXXXXXXNPKHTHKFIVNAFSDLLVSIMSSESCPKIKDLSQDG 821
           +           NPKHTHKFI++AF+D++V ++SS S         DG
Sbjct: 161 YLHELLSCYLKLNPKHTHKFIISAFADIVVCLLSSPSQESDTQREPDG 208


>ref|XP_002307592.1| predicted protein [Populus trichocarpa] gi|222857041|gb|EEE94588.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  116 bits (290), Expect = 8e-24
 Identities = 78/196 (39%), Positives = 93/196 (47%), Gaps = 42/196 (21%)
 Frame = +3

Query: 324 TTLIKNFNSLYDLPXXXXXXXXXXADHXXXXXXXXXXXXXXXXXXXATVFASQRFFFSSP 503
           T LIKN+NSLYD            +                     ATV ASQRFFFSSP
Sbjct: 39  TFLIKNYNSLYDPTIDSASSSTSSSSSSSSEPDF------------ATVCASQRFFFSSP 86

Query: 504 GRSNSIIDSP--------------AGNPDHNTL--------------------------- 560
           GRSNSII+S               A   D N L                           
Sbjct: 87  GRSNSIIESTPSIVTSSDSSDNLVAPQSDSNGLTTNPSNDKSLLVDSCNNSTHPQLLKSP 146

Query: 561 -VPDSIAIQTYSPDPLQDFRKSMQEMVEAHGIIDVKADWEFXXXXXXXXXXXNPKHTHKF 737
            V DS+A+ TYSPDP  DFR+SMQEMVEA  ++DV A+WE+           NPK +HKF
Sbjct: 147 TVKDSVAVPTYSPDPYMDFRRSMQEMVEARDLVDVNANWEYLHELLSCYLDLNPKSSHKF 206

Query: 738 IVNAFSDLLVSIMSSE 785
           IV AF+DLLVS++SS+
Sbjct: 207 IVGAFADLLVSLLSSQ 222


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