BLASTX nr result

ID: Bupleurum21_contig00019980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019980
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139281.1| PREDICTED: heparanase-like protein 3-like [C...   243   1e-62
ref|XP_004159389.1| PREDICTED: LOW QUALITY PROTEIN: heparanase-l...   241   5e-62
ref|XP_002331013.1| predicted protein [Populus trichocarpa] gi|2...   234   8e-60
ref|XP_002533671.1| heparanase, putative [Ricinus communis] gi|2...   231   4e-59
ref|XP_002324603.1| predicted protein [Populus trichocarpa] gi|2...   224   5e-57

>ref|XP_004139281.1| PREDICTED: heparanase-like protein 3-like [Cucumis sativus]
          Length = 539

 Score =  243 bits (621), Expect = 1e-62
 Identities = 123/179 (68%), Positives = 140/179 (78%), Gaps = 4/179 (2%)
 Frame = -3

Query: 526 AKIVFGLNALNGRSIHS-GSAVGKWNSTNAESFIQYTVKKNYTIHGWEFGNELXXXXXXX 350
           AKI+FGLNALNGR I + G +VG WN TNAE  I+YTVKKNYTIHGWE GNEL       
Sbjct: 152 AKIIFGLNALNGRQIAANGCSVGAWNYTNAEMLIRYTVKKNYTIHGWELGNELSGNGVGT 211

Query: 349 XXXXAQYSSDTISLIDLVEDIYKSEEFQPLIIAPGGFFDANWFKEFIGK-TPMLNVVSHH 173
                QY+SDTI L ++V+ IYK  E +PLIIAPGGFFD NWFKEF+GK TP L+VV+HH
Sbjct: 212 RILAEQYASDTIVLQNMVQSIYKDIEPKPLIIAPGGFFDENWFKEFVGKTTPSLDVVTHH 271

Query: 172 IYNLGAGVDQHLVEKILDPSVLDGIADTFKQLQNIVKNSQTS--AWVGESGGAYNSGHD 2
           IYNLG GVD+HLVEKILDPS LDG+ DTF +L  I+KNS TS  AWVGESGGAYNSGH+
Sbjct: 272 IYNLGPGVDEHLVEKILDPSYLDGMVDTFNKLHEILKNSPTSAKAWVGESGGAYNSGHN 330


>ref|XP_004159389.1| PREDICTED: LOW QUALITY PROTEIN: heparanase-like protein 3-like
           [Cucumis sativus]
          Length = 539

 Score =  241 bits (615), Expect = 5e-62
 Identities = 122/179 (68%), Positives = 139/179 (77%), Gaps = 4/179 (2%)
 Frame = -3

Query: 526 AKIVFGLNALNGRSIHS-GSAVGKWNSTNAESFIQYTVKKNYTIHGWEFGNELXXXXXXX 350
           AKI+FGLNALNGR I + G +VG WN TNAE  I+YTV KNYTIHGWE GNEL       
Sbjct: 152 AKIIFGLNALNGRQIAANGCSVGAWNYTNAEMLIRYTVXKNYTIHGWELGNELSGNGVGT 211

Query: 349 XXXXAQYSSDTISLIDLVEDIYKSEEFQPLIIAPGGFFDANWFKEFIGK-TPMLNVVSHH 173
                QY+SDTI L ++V+ IYK  E +PLIIAPGGFFD NWFKEF+GK TP L+VV+HH
Sbjct: 212 RILAEQYASDTIVLQNMVQSIYKDIEPKPLIIAPGGFFDENWFKEFVGKTTPSLDVVTHH 271

Query: 172 IYNLGAGVDQHLVEKILDPSVLDGIADTFKQLQNIVKNSQTS--AWVGESGGAYNSGHD 2
           IYNLG GVD+HLVEKILDPS LDG+ DTF +L  I+KNS TS  AWVGESGGAYNSGH+
Sbjct: 272 IYNLGPGVDEHLVEKILDPSYLDGMVDTFNKLHEILKNSPTSAKAWVGESGGAYNSGHN 330


>ref|XP_002331013.1| predicted protein [Populus trichocarpa] gi|222872943|gb|EEF10074.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  234 bits (596), Expect = 8e-60
 Identities = 121/179 (67%), Positives = 139/179 (77%), Gaps = 4/179 (2%)
 Frame = -3

Query: 526 AKIVFGLNALNGRSIHS-GSAVGKWNSTNAESFIQYTVKKNYTIHGWEFGNELXXXXXXX 350
           A+I+FGLNAL GRSI S GSAVG WN TNAESFI YTVKKNY+I+GWE GNEL       
Sbjct: 147 AEIIFGLNALAGRSITSDGSAVGAWNYTNAESFISYTVKKNYSIYGWELGNELSGSGVGT 206

Query: 349 XXXXAQYSSDTISLIDLVEDIYKSEEFQPLIIAPGGFFDANWFKEFIGKT-PMLNVVSHH 173
               AQY+SDTISL + V+ IY S E +PL+IAPGGFFDANWFKEF+ KT   +N ++HH
Sbjct: 207 RVAAAQYASDTISLYNTVKKIYSSIEPKPLVIAPGGFFDANWFKEFVDKTGNSVNAITHH 266

Query: 172 IYNLGAGVDQHLVEKILDPSVLDGIADTFKQLQNIVKNSQTS--AWVGESGGAYNSGHD 2
           IYNLG GVD HL+EKILDPS LDG ADTF  LQ+ +K+S TS  AWVGESGGAYNSG +
Sbjct: 267 IYNLGPGVDTHLIEKILDPSYLDGEADTFNSLQSTIKSSATSAVAWVGESGGAYNSGRN 325


>ref|XP_002533671.1| heparanase, putative [Ricinus communis] gi|223526439|gb|EEF28717.1|
           heparanase, putative [Ricinus communis]
          Length = 551

 Score =  231 bits (590), Expect = 4e-59
 Identities = 117/179 (65%), Positives = 137/179 (76%), Gaps = 4/179 (2%)
 Frame = -3

Query: 526 AKIVFGLNALNGRSIHS-GSAVGKWNSTNAESFIQYTVKKNYTIHGWEFGNELXXXXXXX 350
           AKI+FGLNAL GRSI S GSA G WN  NA+SFI YTV KNYTIHGWE GNEL       
Sbjct: 159 AKIIFGLNALTGRSIQSDGSAAGAWNYANAQSFISYTVNKNYTIHGWELGNELCGSGVGT 218

Query: 349 XXXXAQYSSDTISLIDLVEDIYKSEEFQPLIIAPGGFFDANWFKEFIGKT-PMLNVVSHH 173
                QY+ DTISL ++V++IY   E +PLII+PGGFFD NWFKEF+ KT   ++ ++HH
Sbjct: 219 RVSANQYALDTISLHNIVQEIYSGIEPKPLIISPGGFFDENWFKEFVDKTGNSVDAITHH 278

Query: 172 IYNLGAGVDQHLVEKILDPSVLDGIADTFKQLQNIVKNSQTS--AWVGESGGAYNSGHD 2
           IYNLG GVDQHLVEKILDPS LDG A+TF +L++ +KNS TS  AWVGESGGAYNSGH+
Sbjct: 279 IYNLGPGVDQHLVEKILDPSYLDGEANTFSRLKSTLKNSATSATAWVGESGGAYNSGHN 337


>ref|XP_002324603.1| predicted protein [Populus trichocarpa] gi|222866037|gb|EEF03168.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  224 bits (572), Expect = 5e-57
 Identities = 115/179 (64%), Positives = 139/179 (77%), Gaps = 4/179 (2%)
 Frame = -3

Query: 526 AKIVFGLNALNGRSIHS-GSAVGKWNSTNAESFIQYTVKKNYTIHGWEFGNELXXXXXXX 350
           A+I+FGLNAL GRS+ S GSAVG WN +NAESFI YTVKKNY+I+GWE GNEL       
Sbjct: 121 AEIIFGLNALTGRSMKSDGSAVGAWNYSNAESFISYTVKKNYSIYGWELGNELCGSGVGT 180

Query: 349 XXXXAQYSSDTISLIDLVEDIYKSEEFQPLIIAPGGFFDANWFKEFIGKT-PMLNVVSHH 173
               AQY+SDTISL ++V+ IY S E +PL+IAPGGF+DANWFKEF+ KT   ++ ++HH
Sbjct: 181 RVAAAQYASDTISLYNIVKKIYSSIEPKPLVIAPGGFYDANWFKEFVDKTGNSVDAITHH 240

Query: 172 IYNLGAGVDQHLVEKILDPSVLDGIADTFKQLQNIVKNSQTS--AWVGESGGAYNSGHD 2
           IYNLG GVD HL+EKIL+PS LDG A TF  LQ+ +K+S TS  AWVGESGGAYNSG +
Sbjct: 241 IYNLGPGVDTHLIEKILNPSYLDGEARTFNSLQSTLKSSATSAVAWVGESGGAYNSGRN 299


Top