BLASTX nr result

ID: Bupleurum21_contig00019978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019978
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327321.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Viti...    87   2e-15
emb|CAN60803.1| hypothetical protein VITISV_020681 [Vitis vinifera]    86   3e-15
gb|AFK43226.1| unknown [Lotus japonicus]                               86   5e-15

>ref|XP_002327321.1| predicted protein [Populus trichocarpa] gi|222835691|gb|EEE74126.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
 Frame = -2

Query: 222 RRAIVRAVIKPKQK-LNLENGLMALRNHSEAERRRRQRINGHLTTLRSMISGTNKMDKAS 46
           R  +V A ++ ++K ++ E  + ALRNHSEAER+RR RIN HL TLRS++ GT+KMDKAS
Sbjct: 49  RGELVEATVRMERKGVSAEKSIAALRNHSEAERKRRARINAHLDTLRSLVPGTSKMDKAS 108

Query: 45  LLAEVVKHLKELK 7
           LLAEV+ HLKELK
Sbjct: 109 LLAEVISHLKELK 121


>ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|222862451|gb|EEE99957.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/74 (59%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
 Frame = -2

Query: 222 RRAIVRAVIKPKQK-LNLENGLMALRNHSEAERRRRQRINGHLTTLRSMISGTNKMDKAS 46
           R  +V A ++ ++K +  E  + AL+NHSEAE++RR RIN HL TLRS++ GT KMDKAS
Sbjct: 49  RGELVEATVRMERKGVAAERSIAALKNHSEAEKKRRARINAHLDTLRSLVPGTRKMDKAS 108

Query: 45  LLAEVVKHLKELKR 4
           LLAEV+ HLKELKR
Sbjct: 109 LLAEVIAHLKELKR 122


>ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 259

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 RRAIVRAVIK-PKQKLNLENGLMALRNHSEAERRRRQRINGHLTTLRSMISGTNKMDKAS 46
           R  +VRA  +    ++  E  ++AL+NHSEAERRRR RIN HL TLR +I GT KMDKAS
Sbjct: 41  RGELVRAPARLGPNEVKAEKAMVALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKAS 100

Query: 45  LLAEVVKHLKELKRT 1
           LL EVV HLKELKR+
Sbjct: 101 LLGEVVSHLKELKRS 115


>emb|CAN60803.1| hypothetical protein VITISV_020681 [Vitis vinifera]
          Length = 323

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = -2

Query: 222 RRAIVRAVIK-PKQKLNLENGLMALRNHSEAERRRRQRINGHLTTLRSMISGTNKMDKAS 46
           R  +VRA  +    ++  E  ++AL+NHSEAERRRR RIN HL TLR +I GT KMDKAS
Sbjct: 42  RGELVRAPARLGPNEVKAEKAMVALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKAS 101

Query: 45  LLAEVVKHLKELKR 4
           LL EVV HLKELKR
Sbjct: 102 LLGEVVSHLKELKR 115


>gb|AFK43226.1| unknown [Lotus japonicus]
          Length = 243

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 45/70 (64%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = -2

Query: 213 IVRAVIKPKQK-LNLENGLMALRNHSEAERRRRQRINGHLTTLRSMISGTNKMDKASLLA 37
           +V A ++ ++K ++ E  + ALRNHSEAERRRR RIN HL TLR++I G NKMDKASLLA
Sbjct: 35  LVEAPMQLERKGVSPERSIEALRNHSEAERRRRARINAHLDTLRTVIPGANKMDKASLLA 94

Query: 36  EVVKHLKELK 7
           EV+ HLKELK
Sbjct: 95  EVITHLKELK 104


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