BLASTX nr result

ID: Bupleurum21_contig00019964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019964
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)...   186   2e-45
emb|CBI24859.3| unnamed protein product [Vitis vinifera]              186   2e-45
emb|CAN62490.1| hypothetical protein VITISV_035537 [Vitis vinifera]   184   5e-45
ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medic...   174   5e-42
ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycin...   173   1e-41

>ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)-methyltransferase-like
           [Vitis vinifera]
          Length = 292

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/110 (80%), Positives = 99/110 (90%)
 Frame = -2

Query: 375 KGEKRLLAFTKRGTNIHSDFSYRRGDWLVFGAETFGLPAEALLDCKNEPLGGGTIRIPMV 196
           +GEKRLLAFTKRGTNIHSDFSYR+GDWL+FG+ET GLP EALLDCK+E LGGGTIRIPMV
Sbjct: 183 EGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMV 242

Query: 195 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDREKSSIKEDVFA 46
           ETYVRCLNLSVSVGI+LYEA RQLNYEQLQ P++P  D  KS + ED+FA
Sbjct: 243 ETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPPTDSSKSFLTEDIFA 292


>emb|CBI24859.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/110 (80%), Positives = 99/110 (90%)
 Frame = -2

Query: 375 KGEKRLLAFTKRGTNIHSDFSYRRGDWLVFGAETFGLPAEALLDCKNEPLGGGTIRIPMV 196
           +GEKRLLAFTKRGTNIHSDFSYR+GDWL+FG+ET GLP EALLDCK+E LGGGTIRIPMV
Sbjct: 141 EGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMV 200

Query: 195 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDREKSSIKEDVFA 46
           ETYVRCLNLSVSVGI+LYEA RQLNYEQLQ P++P  D  KS + ED+FA
Sbjct: 201 ETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPPTDSSKSFLTEDIFA 250


>emb|CAN62490.1| hypothetical protein VITISV_035537 [Vitis vinifera]
          Length = 205

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/110 (80%), Positives = 99/110 (90%)
 Frame = -2

Query: 375 KGEKRLLAFTKRGTNIHSDFSYRRGDWLVFGAETFGLPAEALLDCKNEPLGGGTIRIPMV 196
           +GEKRLLAFTKRGTNIHSDFSYR+GDWL+FG+ET GLP EALLDCK+E LGGGTI+IPMV
Sbjct: 96  EGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIQIPMV 155

Query: 195 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDREKSSIKEDVFA 46
           ETYVRCLNLSVSVGI+LYEA RQLNYEQLQ P++P  D  KS + ED+FA
Sbjct: 156 ETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPSTDSSKSFLTEDIFA 205


>ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medicago truncatula]
           gi|355488149|gb|AES69352.1| tRNA/rRNA methyltransferase,
           putative [Medicago truncatula]
          Length = 278

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/110 (79%), Positives = 96/110 (87%), Gaps = 1/110 (0%)
 Frame = -2

Query: 375 KGEKRLLAFTKRGTNIHSDFSYRRGDWLVFGAETFGLPAEALLDCKNEPLGGGTIRIPMV 196
           +GEKRLLAFTKRGT IHSDFSYR+GD+L+FGAET GLP EALLDCK EP GGGTI+IPMV
Sbjct: 168 EGEKRLLAFTKRGTKIHSDFSYRKGDYLLFGAETTGLPPEALLDCKTEPFGGGTIKIPMV 227

Query: 195 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDREKSS-IKEDVF 49
           ETYVRCLNLSVSVGI+LYEA RQLNYE LQ P+E  ID E+ S I ED+F
Sbjct: 228 ETYVRCLNLSVSVGIALYEASRQLNYESLQIPSETCIDTEEESFITEDIF 277


>ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycine max]
           gi|255638690|gb|ACU19650.1| unknown [Glycine max]
          Length = 260

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/111 (77%), Positives = 97/111 (87%), Gaps = 1/111 (0%)
 Frame = -2

Query: 375 KGEKRLLAFTKRGTNIHSDFSYRRGDWLVFGAETFGLPAEALLDCKNEPLGGGTIRIPMV 196
           +GEKRLLAFTKRGT IHS+FSYR+GD+L+FG+ET GLP EALLDCK EP GGGTI+IPMV
Sbjct: 150 EGEKRLLAFTKRGTKIHSEFSYRKGDYLIFGSETSGLPPEALLDCKTEPFGGGTIKIPMV 209

Query: 195 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYID-REKSSIKEDVFA 46
           ETYVRCLNLSVSVGI+LYEA RQLNYE LQ P+E  ID  E+S I ED+FA
Sbjct: 210 ETYVRCLNLSVSVGIALYEASRQLNYESLQVPSESCIDTTEESFIAEDIFA 260


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