BLASTX nr result

ID: Bupleurum21_contig00019963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019963
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)...   179   2e-43
emb|CBI24859.3| unnamed protein product [Vitis vinifera]              179   2e-43
emb|CAN62490.1| hypothetical protein VITISV_035537 [Vitis vinifera]   178   5e-43
ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medic...   170   1e-40
ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycin...   167   6e-40

>ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)-methyltransferase-like
           [Vitis vinifera]
          Length = 292

 Score =  179 bits (454), Expect = 2e-43
 Identities = 85/109 (77%), Positives = 97/109 (88%)
 Frame = -2

Query: 354 KGEKRLLSFTKRGTNIHSDFSYRRGDWLVYGAETFGLPAEALLDCKNEPVGGGTIRIPMV 175
           +GEKRLL+FTKRGTNIHSDFSYR+GDWL++G+ET GLP EALLDCK+E +GGGTIRIPMV
Sbjct: 183 EGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMV 242

Query: 174 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDCEKSSIKEDAF 28
           ETYVRCLNLSVSVGI+LYEA RQLNYEQLQ P++P  D  KS + ED F
Sbjct: 243 ETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPPTDSSKSFLTEDIF 291


>emb|CBI24859.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  179 bits (454), Expect = 2e-43
 Identities = 85/109 (77%), Positives = 97/109 (88%)
 Frame = -2

Query: 354 KGEKRLLSFTKRGTNIHSDFSYRRGDWLVYGAETFGLPAEALLDCKNEPVGGGTIRIPMV 175
           +GEKRLL+FTKRGTNIHSDFSYR+GDWL++G+ET GLP EALLDCK+E +GGGTIRIPMV
Sbjct: 141 EGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMV 200

Query: 174 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDCEKSSIKEDAF 28
           ETYVRCLNLSVSVGI+LYEA RQLNYEQLQ P++P  D  KS + ED F
Sbjct: 201 ETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPPTDSSKSFLTEDIF 249


>emb|CAN62490.1| hypothetical protein VITISV_035537 [Vitis vinifera]
          Length = 205

 Score =  178 bits (451), Expect = 5e-43
 Identities = 84/109 (77%), Positives = 97/109 (88%)
 Frame = -2

Query: 354 KGEKRLLSFTKRGTNIHSDFSYRRGDWLVYGAETFGLPAEALLDCKNEPVGGGTIRIPMV 175
           +GEKRLL+FTKRGTNIHSDFSYR+GDWL++G+ET GLP EALLDCK+E +GGGTI+IPMV
Sbjct: 96  EGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIQIPMV 155

Query: 174 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDCEKSSIKEDAF 28
           ETYVRCLNLSVSVGI+LYEA RQLNYEQLQ P++P  D  KS + ED F
Sbjct: 156 ETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPSTDSSKSFLTEDIF 204


>ref|XP_003599101.1| tRNA/rRNA methyltransferase, putative [Medicago truncatula]
           gi|355488149|gb|AES69352.1| tRNA/rRNA methyltransferase,
           putative [Medicago truncatula]
          Length = 278

 Score =  170 bits (431), Expect = 1e-40
 Identities = 85/110 (77%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
 Frame = -2

Query: 354 KGEKRLLSFTKRGTNIHSDFSYRRGDWLVYGAETFGLPAEALLDCKNEPVGGGTIRIPMV 175
           +GEKRLL+FTKRGT IHSDFSYR+GD+L++GAET GLP EALLDCK EP GGGTI+IPMV
Sbjct: 168 EGEKRLLAFTKRGTKIHSDFSYRKGDYLLFGAETTGLPPEALLDCKTEPFGGGTIKIPMV 227

Query: 174 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYIDCEKSS-IKEDAF 28
           ETYVRCLNLSVSVGI+LYEA RQLNYE LQ P+E  ID E+ S I ED F
Sbjct: 228 ETYVRCLNLSVSVGIALYEASRQLNYESLQIPSETCIDTEEESFITEDIF 277


>ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycine max]
           gi|255638690|gb|ACU19650.1| unknown [Glycine max]
          Length = 260

 Score =  167 bits (424), Expect = 6e-40
 Identities = 83/110 (75%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
 Frame = -2

Query: 354 KGEKRLLSFTKRGTNIHSDFSYRRGDWLVYGAETFGLPAEALLDCKNEPVGGGTIRIPMV 175
           +GEKRLL+FTKRGT IHS+FSYR+GD+L++G+ET GLP EALLDCK EP GGGTI+IPMV
Sbjct: 150 EGEKRLLAFTKRGTKIHSEFSYRKGDYLIFGSETSGLPPEALLDCKTEPFGGGTIKIPMV 209

Query: 174 ETYVRCLNLSVSVGISLYEACRQLNYEQLQNPTEPYID-CEKSSIKEDAF 28
           ETYVRCLNLSVSVGI+LYEA RQLNYE LQ P+E  ID  E+S I ED F
Sbjct: 210 ETYVRCLNLSVSVGIALYEASRQLNYESLQVPSESCIDTTEESFIAEDIF 259


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