BLASTX nr result
ID: Bupleurum21_contig00019955
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00019955 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 76 3e-12 emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera] 76 3e-12 ref|XP_002510115.1| transcription initiation factor, putative [R... 62 4e-08 ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 emb|CBI19420.3| unnamed protein product [Vitis vinifera] 60 2e-07 >ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera] Length = 922 Score = 75.9 bits (185), Expect = 3e-12 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 9/97 (9%) Frame = -2 Query: 265 AQSLKQQPQNMQARQVPVRPSVGTIQS---------MGLPKYEKQSTFTEPMNVQGGSLS 113 A S KQQP + Q RQVP+ ++G+ Q M +PK+E+QS+ +P VQGGSL Sbjct: 388 ATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLP 447 Query: 112 QSISHSKVQQNSVHWQASVKEEQSSSALIPGHYVKQE 2 + S +QQ+SV WQ+S +EQ SS YVKQE Sbjct: 448 HPSNSSTLQQSSVPWQSSTNKEQISSMA----YVKQE 480 >emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera] Length = 906 Score = 75.9 bits (185), Expect = 3e-12 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 9/97 (9%) Frame = -2 Query: 265 AQSLKQQPQNMQARQVPVRPSVGTIQS---------MGLPKYEKQSTFTEPMNVQGGSLS 113 A S KQQP + Q RQVP+ ++G+ Q M +PK+E+QS+ +P VQGGSL Sbjct: 433 ATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLP 492 Query: 112 QSISHSKVQQNSVHWQASVKEEQSSSALIPGHYVKQE 2 + S +QQ+SV WQ+S +EQ SS YVKQE Sbjct: 493 HPSNSSTLQQSSVPWQSSTNKEQISSMA----YVKQE 525 >ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis] gi|223550816|gb|EEF52302.1| transcription initiation factor, putative [Ricinus communis] Length = 925 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%) Frame = -2 Query: 259 SLKQQPQNMQARQVP--------VRPSVGTIQSMGLPKYEKQSTFTEPMNVQGGSLSQSI 104 S+K QP ++Q RQ+ + S T+ + + K+E+ ++ ++P VQ GS+SQ Sbjct: 389 SMKTQPHDLQMRQISHSTMASTQIGGSTPTLNMVHVSKFERPNSVSDPSRVQSGSMSQYN 448 Query: 103 SHSKVQQNSVHWQASVKEEQSSSALIPGHYVKQE 2 + S + QNS+ WQA +EQ+S +YVKQE Sbjct: 449 NKSALPQNSIPWQAPTNKEQTSPLFPSTNYVKQE 482 >ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1| predicted protein [Populus trichocarpa] Length = 875 Score = 60.5 bits (145), Expect = 1e-07 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%) Frame = -2 Query: 259 SLKQQPQNMQARQVPVRPSVGTIQSMG-------LPKYEKQSTFTEPMNVQGGSLSQSIS 101 S+K QP + Q RQ+P ++G Q G PK+E+Q++ +P V GS+S + Sbjct: 362 SVKPQPHDPQTRQIPHHQNLGVTQIGGPMHSMISTPKFERQNSADDPSRVHSGSVSHYTN 421 Query: 100 HSKVQQNSVHWQASVKEEQSSSALIPGHYVK 8 S +QQNS WQA E+S ++ +YVK Sbjct: 422 KSALQQNSAPWQAPSNREKSPASFSSLNYVK 452 >emb|CBI19420.3| unnamed protein product [Vitis vinifera] Length = 882 Score = 59.7 bits (143), Expect = 2e-07 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%) Frame = -2 Query: 265 AQSLKQQPQNMQARQVPVRPSVGTIQS---------MGLPKYEKQSTFTEPMNVQGGSLS 113 A S KQQP + Q RQVP+ ++G+ Q M +PK+E+QS+ +P VQGGSL Sbjct: 394 ATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLP 453 Query: 112 QSISHSKVQQNSVHWQASVKEEQSSS 35 + S +QQ+S ++ + Q+ S Sbjct: 454 HPSNSSTLQQSSQQQKSQLSTPQNES 479