BLASTX nr result

ID: Bupleurum21_contig00019955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019955
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...    76   3e-12
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]    76   3e-12
ref|XP_002510115.1| transcription initiation factor, putative [R...    62   4e-08
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
emb|CBI19420.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
 Frame = -2

Query: 265 AQSLKQQPQNMQARQVPVRPSVGTIQS---------MGLPKYEKQSTFTEPMNVQGGSLS 113
           A S KQQP + Q RQVP+  ++G+ Q          M +PK+E+QS+  +P  VQGGSL 
Sbjct: 388 ATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLP 447

Query: 112 QSISHSKVQQNSVHWQASVKEEQSSSALIPGHYVKQE 2
              + S +QQ+SV WQ+S  +EQ SS      YVKQE
Sbjct: 448 HPSNSSTLQQSSVPWQSSTNKEQISSMA----YVKQE 480


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
 Frame = -2

Query: 265 AQSLKQQPQNMQARQVPVRPSVGTIQS---------MGLPKYEKQSTFTEPMNVQGGSLS 113
           A S KQQP + Q RQVP+  ++G+ Q          M +PK+E+QS+  +P  VQGGSL 
Sbjct: 433 ATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLP 492

Query: 112 QSISHSKVQQNSVHWQASVKEEQSSSALIPGHYVKQE 2
              + S +QQ+SV WQ+S  +EQ SS      YVKQE
Sbjct: 493 HPSNSSTLQQSSVPWQSSTNKEQISSMA----YVKQE 525


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
           gi|223550816|gb|EEF52302.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 925

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
 Frame = -2

Query: 259 SLKQQPQNMQARQVP--------VRPSVGTIQSMGLPKYEKQSTFTEPMNVQGGSLSQSI 104
           S+K QP ++Q RQ+         +  S  T+  + + K+E+ ++ ++P  VQ GS+SQ  
Sbjct: 389 SMKTQPHDLQMRQISHSTMASTQIGGSTPTLNMVHVSKFERPNSVSDPSRVQSGSMSQYN 448

Query: 103 SHSKVQQNSVHWQASVKEEQSSSALIPGHYVKQE 2
           + S + QNS+ WQA   +EQ+S      +YVKQE
Sbjct: 449 NKSALPQNSIPWQAPTNKEQTSPLFPSTNYVKQE 482


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
 Frame = -2

Query: 259 SLKQQPQNMQARQVPVRPSVGTIQSMG-------LPKYEKQSTFTEPMNVQGGSLSQSIS 101
           S+K QP + Q RQ+P   ++G  Q  G        PK+E+Q++  +P  V  GS+S   +
Sbjct: 362 SVKPQPHDPQTRQIPHHQNLGVTQIGGPMHSMISTPKFERQNSADDPSRVHSGSVSHYTN 421

Query: 100 HSKVQQNSVHWQASVKEEQSSSALIPGHYVK 8
            S +QQNS  WQA    E+S ++    +YVK
Sbjct: 422 KSALQQNSAPWQAPSNREKSPASFSSLNYVK 452


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
 Frame = -2

Query: 265 AQSLKQQPQNMQARQVPVRPSVGTIQS---------MGLPKYEKQSTFTEPMNVQGGSLS 113
           A S KQQP + Q RQVP+  ++G+ Q          M +PK+E+QS+  +P  VQGGSL 
Sbjct: 394 ATSTKQQPHDSQMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLP 453

Query: 112 QSISHSKVQQNSVHWQASVKEEQSSS 35
              + S +QQ+S   ++ +   Q+ S
Sbjct: 454 HPSNSSTLQQSSQQQKSQLSTPQNES 479


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