BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019951
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   118   1e-24
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   116   6e-24
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...   109   6e-22
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab...   109   6e-22

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score =  129 bits (325), Expect = 5e-28
 Identities = 74/227 (32%), Positives = 119/227 (52%), Gaps = 2/227 (0%)
 Frame = +3

Query: 6    NSSNSNPIYRKLDIVMVNSSWLSSFPMAHALFQPRGLSDHCPALISTGLKWISGKKPFQM 185
            N    N I RKLD V+VN  W   FP++ A F P G+SDH P ++       + KKPF+ 
Sbjct: 565  NQCPENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRF 624

Query: 186  FLHLMNNDEFLPLINEAWSINLSGDPWYVLTNKLKRVKSAMILLNKK-VGNVNSRVAAAR 362
            F   M++DEF+PL+ + W  N  G P Y L  KL+++K  + L N     N++ RV  A+
Sbjct: 625  FDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRVRDAK 684

Query: 363  NDLLQFQLNNNPPYTDQFI-LQEKDLRQKLQKALDDAECFQKQKSRMAWVQNGDSNSKFF 539
            N + + Q   +  + +  + ++E+D+  K    +   E F KQK+R+ W+  GD N+ +F
Sbjct: 685  NKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYF 744

Query: 540  FNQCLSRWNSNKIVSITDDMNVEWHTHADIANVAVNYFKDKLGHSKM 680
                  R N NK++S+T +          + +  ++YF   LG  +M
Sbjct: 745  HKSVNGRQNRNKLLSLTREDGEVVERQEAVKSEVISYFHRVLGVDQM 791


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  118 bits (296), Expect = 1e-24
 Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
 Frame = +3

Query: 3   WNSSNSNPIYRKLDIVMVNSSWLSSFPMAHALFQPRGLSDHCPALISTGLKWISGKKPFQ 182
           WN S + P+ +K+D ++VN SW + FP +  LF P   SDH    +   L  I  K+PF+
Sbjct: 183 WNKSKTRPVAKKIDRILVNESWSNLFPSSFGLFGPPDFSDHASCGVVLELDPIKAKRPFK 242

Query: 183 MFLHLMNNDEFLPLINEAW-SINLSGDPWYVLTNKLKRVKSAMILLNK-KVGNVNSRVAA 356
            F  L+ N EFL L+ + W S N+ G   + ++ KLK +K  +   ++    N+  R   
Sbjct: 243 FFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSNLEKRTEE 302

Query: 357 ARNDLLQFQ--LNNNPPYTDQFILQEKDLRQKLQKALDDAECFQKQKSRMAWVQNGDSNS 530
           A   LL FQ    +NP   +     E + ++K Q      E F +Q+SR+ W   GD N+
Sbjct: 303 AHETLLSFQNLTLDNPSLEN--AAHELEAQRKWQILATAEESFFRQRSRVTWFAEGDGNT 360

Query: 531 KFFFNQCLSRWNSNKIVSITDDMNVEWHTHADIANVAVNYFKDKL 665
           ++F     SR + N I ++ DD   +  +   IA+    YF++ L
Sbjct: 361 RYFHRMADSRKSVNTITTLVDDSGTQIDSQQGIADHCALYFENLL 405


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
           thaliana]
          Length = 1253

 Score =  116 bits (290), Expect = 6e-24
 Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
 Frame = +3

Query: 3   WNSSNSNPIYRKLDIVMVNSSWLSSFPMAHALFQPRGLSDHCPALISTGLKWISGKKPFQ 182
           WN S + P+ +KLD ++VN SW S FP A+A+F     SDH    +         K+PF+
Sbjct: 140 WNKSATRPVAKKLDRILVNESWCSRFPSAYAVFGEPDFSDHASCGVIINPLMHREKRPFR 199

Query: 183 MFLHLMNNDEFLPLINEAW-SINLSGDPWYVLTNKLKRVKSAMILLN-KKVGNVNSRVAA 356
            +  L+ N +F+ L+ E W SIN+ G   + ++ KLK +K+ +   + +   N+  RV  
Sbjct: 200 FYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKKLKALKNPIRTFSMENFSNLEKRVKE 259

Query: 357 ARNDLLQFQLNNNPPYTDQFILQEKDLRQKLQKALDDAECFQKQKSRMAWVQNGDSNSKF 536
           A N +L  Q       T      E + ++K    +   E F  Q+SR+ W+  GDSN+ +
Sbjct: 260 AHNLVLYRQNKTLSDPTIPNAALEMEAQRKWLILVKAEESFFCQRSRVTWMGEGDSNTSY 319

Query: 537 FFNQCLSRWNSNKIVSITDDMNVEWHTHADIANVAVNYFKDKLG 668
           F     SR   N I  I DD  V+  T   I    + YF + LG
Sbjct: 320 FHRMADSRKAVNTIHIIIDDNGVKIDTQLGIKEHCIEYFSNLLG 363


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score =  109 bits (273), Expect = 6e-22
 Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 6/227 (2%)
 Frame = +3

Query: 6   NSSNSNPIYRKLDIVMVNSSWLSSFPMAHALFQPRGLSDHCPALISTGLKWISGKKPFQM 185
           N  + NPI RKLD  + N  W SSFP A A+F+  G+SDH P +I         KK F+ 
Sbjct: 211 NHQDDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRY 270

Query: 186 FLHLMNNDEFLPLINEAWSINLS-GDPWYVLTNKLKRVKSAMILLNKK-VGNVNSRVAAA 359
           F  L  +  FL  +  AW   +  G   + L   LK  K    LLN++  GN+  +   A
Sbjct: 271 FSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEA 330

Query: 360 RNDL--LQFQLNNNPPYTDQFILQEKDLRQKLQKALDDAECFQKQKSRMAWVQNGDSNSK 533
            + L  +Q QL  NP  +D     E   R+K        E F +QKSR+ W+Q+GD+N++
Sbjct: 331 LDSLESIQSQLLTNP--SDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTR 388

Query: 534 FFFNQCLSRWNSN--KIVSITDDMNVEWHTHADIANVAVNYFKDKLG 668
           FF    L+    N  K + + DD+ VE  T   +  + V Y+   LG
Sbjct: 389 FFHKVILANQAKNLIKFLRMDDDVRVENVT--QVKEMIVAYYTHLLG 433


>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
          Length = 602

 Score =  109 bits (273), Expect = 6e-22
 Identities = 78/227 (34%), Positives = 111/227 (48%), Gaps = 6/227 (2%)
 Frame = +3

Query: 6   NSSNSNPIYRKLDIVMVNSSWLSSFPMAHALFQPRGLSDHCPALISTGLKWISGKKPFQM 185
           N  + NPI RKLD  + N  W SSFP A A+F+  G+SDH P +I         KK F+ 
Sbjct: 211 NHQDDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRY 270

Query: 186 FLHLMNNDEFLPLINEAWSINLS-GDPWYVLTNKLKRVKSAMILLNKK-VGNVNSRVAAA 359
           F  L  +  FL  +  AW   +  G   + L   LK  K    LLN++  GN+  +   A
Sbjct: 271 FSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEA 330

Query: 360 RNDL--LQFQLNNNPPYTDQFILQEKDLRQKLQKALDDAECFQKQKSRMAWVQNGDSNSK 533
            + L  +Q QL  NP  +D     E   R+K        E F +QKSR+ W+Q+GD+N++
Sbjct: 331 LDSLESIQSQLLTNP--SDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTR 388

Query: 534 FFFNQCLSRWNSN--KIVSITDDMNVEWHTHADIANVAVNYFKDKLG 668
           FF    L+    N  K + + DD+ VE  T   +  + V Y+   LG
Sbjct: 389 FFHKVILANQAKNLIKFLRMDDDVRVENVT--QVKEMIVAYYTHLLG 433