BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019946
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328882.1| predicted protein [Populus trichocarpa] gi|2...    89   9e-16
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...    80   4e-13
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   7e-13
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   7e-13
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...    72   1e-10

>ref|XP_002328882.1| predicted protein [Populus trichocarpa] gi|222839312|gb|EEE77649.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
 Frame = -2

Query: 499 YPPKKQRVPDNKKNIKKYCAYHEETGHNTDDCYNLAKLIEKLIQEGELAKFIXXXXXXXX 320
           +P ++Q    N K  KKYC  H E GH+T+DC  L K +E+L+ +G L  F+        
Sbjct: 142 FPFRRQEPNPNLKFSKKYCQLHRERGHDTEDCNALIKEVERLLAQGYLIPFLKKDPSQDR 201

Query: 319 XXXXXXXXXXKIRGEINTISGGHVLGYN-SKNARKRYAKEVYNLYKRTERPEQEDPIYFT 143
                      +  EI  I GG       ++N R R   +V  L    +     +PI FT
Sbjct: 202 ERDKVRQQGPTL-SEILIILGGSTTNVGVARNKRTRVGDQV--LVAANQERFWYEPITFT 258

Query: 142 SDDYEGVTWPHEDPFVFSCILEEHKIHKVLVDGGSSVDVLFKKA 11
             D  G+ +PHE   V S ++E HK+H++LVD  S V+++  +A
Sbjct: 259 PTDGRGIEYPHEYALVISTVMERHKVHRILVDNDSLVNIMSAEA 302


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1459

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
 Frame = -2

Query: 451 KYCAYHEETGHNTDDCYNLAKLIEKLIQEGELAKFIXXXXXXXXXXXXXXXXXXKI---- 284
           K+   H    H T++C  +A L+EK +++ +  K+                    I    
Sbjct: 149 KFYKVHGPCNHATEECRQMASLVEKHVRQYD-GKYEGVQGGQNMLEGQKVMKIEAIEEAP 207

Query: 283 RGEINTISGGHVLGYNSKNARKRYAKEVYNL---YKRTERPEQEDPIYFTSDDYEGVTWP 113
           +  IN I+GG  LG  SK  RK Y ++++++   Y+          I F  +D EG+ +P
Sbjct: 208 KRVINAITGGSSLGVESKRQRKAYVRQIHHVGTSYQSVPPAYSNTVISFGPEDAEGILFP 267

Query: 112 HEDPFVFSCILEEHKIHKVLVDGGSSVDVLFKKAY 8
           H+DP V S  + + ++ +VLVDGGSS DVLF  A+
Sbjct: 268 HQDPLVISVEIAQCEVQRVLVDGGSSADVLFYDAF 302


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
 Frame = -2

Query: 451  KYCAYHEETGHNTDDCYNLAKLIEKLIQEGELAKFIXXXXXXXXXXXXXXXXXXKIRGE- 275
            K+C  H   GH+T++C  +  L+EK +   E  K+                       E 
Sbjct: 630  KFCHIHGPGGHSTEECRQMTHLLEKHVNRYE-DKYEGARDQRGQNAIEAPQVMKIEAIEE 688

Query: 274  -----INTISGGHVLGYNSKNARKRYAKEVYNL---YKRTERPEQEDPIYFTSDDYEGVT 119
                 IN I+GG  LG  SK  RK Y ++V ++   Y+       +  I F  +D EG+ 
Sbjct: 689  VPKRVINAITGGSSLGVESKRQRKAYVRQVNHVGTSYQSNPPVYSKTVISFGPEDAEGIL 748

Query: 118  WPHEDPFVFSCILEEHKIHKVLVDGGSSVDVLFKKAY 8
            +PH+DP V S  + + ++ +VL+DGGSS DVLF  A+
Sbjct: 749  FPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAF 785


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
 Frame = -2

Query: 451  KYCAYHEETGHNTDDCYNLAKLIEKLIQEGEL----AKFIXXXXXXXXXXXXXXXXXXKI 284
            K+C  H   GH+T++C  +  L+EK +   E     A+                    ++
Sbjct: 630  KFCHIHGPGGHSTEECRQMTHLLEKHVNRYENKYEGARDQRGQNAIKAPQVMKIEAIEEV 689

Query: 283  -RGEINTISGGHVLGYNSKNARKRYAKEVYN---LYKRTERPEQEDPIYFTSDDYEGVTW 116
             +  IN I+GG  LG  SK  RK Y ++V +   +Y+       +  I F  +D EG+ +
Sbjct: 690  PKRVINAITGGSSLGVESKRQRKAYVRQVNHVGTIYQSKPPVYSKTVISFGPEDAEGILF 749

Query: 115  PHEDPFVFSCILEEHKIHKVLVDGGSSVDVLFKKAY 8
            PH+DP V S  + + ++ +VL+DGGSS DVLF  A+
Sbjct: 750  PHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAF 785


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = -2

Query: 274 INTISGGHVLGYNSKNARKRYAKEVYNL---YKRTERPEQEDPIYFTSDDYEGVTWPHED 104
           IN I+GG  LG  SK  RK Y +++ ++   Y+          I F  +D EG+ +PH+D
Sbjct: 45  INAITGGSSLGVESKRQRKAYVRQINHVGTSYQSIPPAYSNTVISFGPEDAEGILFPHQD 104

Query: 103 PFVFSCILEEHKIHKVLVDGGSSVDVLFKKAY 8
           P V S  + + ++ +VLVDGGSS DVLF  A+
Sbjct: 105 PLVISVEITQCEVQRVLVDGGSSADVLFYDAF 136