BLASTX nr result

ID: Bupleurum21_contig00019927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019927
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93447.3|EF1D_PIMBR RecName: Full=Elongation factor 1-delta; ...    61   3e-07
ref|XP_001772056.1| predicted protein [Physcomitrella patens sub...    60   5e-07
emb|CBI15651.3| unnamed protein product [Vitis vinifera]               60   7e-07
gb|ABK21209.1| unknown [Picea sitchensis]                              60   9e-07
gb|ABK21877.1| unknown [Picea sitchensis] gi|116783877|gb|ABK231...    59   1e-06

>sp|P93447.3|EF1D_PIMBR RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName:
           Full=Elongation factor 1B-beta; AltName: Full=eEF-1B
           beta gi|1841870|gb|AAB68395.1| elongation factor 1-beta
           [Pimpinella brachycarpa]
          Length = 226

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +3

Query: 366 DFLVSVDDLIEDHLTAEPSSEYIQSCDIVTFNKI 467
           D LVSVDDL+ED+LTAEP++EYIQSCDIV FNKI
Sbjct: 193 DDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226


>ref|XP_001772056.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676657|gb|EDQ63137.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 236

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = +3

Query: 366 DFLVSVDDLIEDHLTAEPSSEYIQSCDIVTFNKI 467
           D LVS+D+LIEDHLT+EP++EYIQSCDIV FNKI
Sbjct: 203 DDLVSIDNLIEDHLTSEPNNEYIQSCDIVAFNKI 236


>emb|CBI15651.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 366 DFLVSVDDLIEDHLTAEPSSEYIQSCDIVTFNKILSLKCAILL 494
           D LVSVDDLIE+ LT EP++EY+QSCDIV FNKIL +   I L
Sbjct: 197 DDLVSVDDLIEEQLTVEPTNEYVQSCDIVAFNKILLIHALIHL 239


>gb|ABK21209.1| unknown [Picea sitchensis]
          Length = 224

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 366 DFLVSVDDLIEDHLTAEPSSEYIQSCDIVTFNKI 467
           D LVSVDDLIED LTAEP++EYIQSCDIV FNKI
Sbjct: 191 DDLVSVDDLIEDCLTAEPANEYIQSCDIVAFNKI 224


>gb|ABK21877.1| unknown [Picea sitchensis] gi|116783877|gb|ABK23123.1| unknown
           [Picea sitchensis] gi|116784000|gb|ABK23176.1| unknown
           [Picea sitchensis] gi|148910430|gb|ABR18291.1| unknown
           [Picea sitchensis] gi|224285905|gb|ACN40666.1| unknown
           [Picea sitchensis]
          Length = 227

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +3

Query: 366 DFLVSVDDLIEDHLTAEPSSEYIQSCDIVTFNKI 467
           D LVSVDDLIED LTAEP++EYIQSCDI  FNKI
Sbjct: 194 DDLVSVDDLIEDRLTAEPANEYIQSCDIAAFNKI 227


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