BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019923
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...    98   1e-18
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...    83   3e-14
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-...    82   8e-14
ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-...    77   3e-12
ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arab...    77   3e-12

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
           gi|296088298|emb|CBI36743.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/107 (53%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
 Frame = +3

Query: 3   ERKVKRLYETFHEPFKCVVPHKTSNLETPTKTVPVP----EAKEGENDTEDASKRKKEEP 170
           ERKVKRLY+TFHEPFK VVP   +  E P      P    E  E END EDASKR+K+EP
Sbjct: 286 ERKVKRLYDTFHEPFKRVVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEP 345

Query: 171 ELTVKSALSDAFTKYSEKVGAKSKKSQ----QVKRGLPKDKNSNDDS 299
           ELTVKSALS AF +YSEK+G ++ + Q    + K   P+ K  N  S
Sbjct: 346 ELTVKSALSAAFAQYSEKIGKRNNRPQGKKHEEKGHAPETKAENKPS 392


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 13/96 (13%)
 Frame = +3

Query: 3   ERKVKRLYETFHEPFKCVVPHKTSNLETPTKTVPV-PEA------------KEGENDTED 143
           ERKVKRL++TFHEPFK V   + +  ET  +  P  PE+            ++ + DTED
Sbjct: 286 ERKVKRLFDTFHEPFKRVESSRQAIPETSVQNKPASPESSIRNKAESSSLIEDKQEDTED 345

Query: 144 ASKRKKEEPELTVKSALSDAFTKYSEKVGAKSKKSQ 251
            SKR+K+EPE+TVKSALS AF KYS +VG +   SQ
Sbjct: 346 VSKRRKKEPEVTVKSALSAAFAKYSGRVGKRKSTSQ 381


>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 391

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
 Frame = +3

Query: 3   ERKVKRLYETFHEPFKCVVPHKTSNLETPTKTVPVPEAKEGENDT------EDASKRKKE 164
           ERKV+RLY+TFHEPFK VV    +  ETPT+    P +   E D       ED S+ KK 
Sbjct: 291 ERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKK- 349

Query: 165 EPELTVKSALSDAFTKYSEKVGAKSKKSQQVKRGLPKDKNS 287
           EP+L VKSALS AF KY++K+       Q+ ++G P+  N+
Sbjct: 350 EPKLNVKSALSAAFAKYADKIAKSGSIPQEKEKGEPESSNT 390


>ref|XP_004167258.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
           sativus]
          Length = 412

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
 Frame = +3

Query: 3   ERKVKRLYETFHEPFKCVVPHKTSNLETPTKTVPVPEAKEGENDT------EDASKRKKE 164
           ERKV+RLY+TFHEPFK VV    +  ETPT+    P +   E D       ED S+ KK 
Sbjct: 290 ERKVRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKK- 348

Query: 165 EPELTVKSALSDAFTKYSEKVGAKSKKSQQVKR 263
           EP+L VKSALS AF KY++K+       Q+ K+
Sbjct: 349 EPKLNVKSALSAAFAKYADKIAKSGSIPQEKKK 381


>ref|XP_002882403.1| hypothetical protein ARALYDRAFT_477808 [Arabidopsis lyrata subsp.
           lyrata] gi|297328243|gb|EFH58662.1| hypothetical protein
           ARALYDRAFT_477808 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
 Frame = +3

Query: 3   ERKVKRLYETFHEPFKCVVPHKTSNLETPTKTVPVPE-------AKEGENDTEDASKRKK 161
           ERKV+RLY+TFHEPFK       S +E      PV +         E E+  ED+ KRKK
Sbjct: 303 ERKVRRLYDTFHEPFKRATSSYPSVVEPTIPEAPVQKNVSSKEPVVEDEDFVEDSRKRKK 362

Query: 162 EEPELTVKSALSDAFTKYSEKVGAKSKKSQQVKRGLPKDKNSNDD 296
           +EPE TVK+ALS  F +YS+K+  K +K ++       D   + D
Sbjct: 363 KEPEKTVKTALSAVFARYSDKLSKKKEKQKEKDATTESDAEIHQD 407