BLASTX nr result

ID: Bupleurum21_contig00019916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019916
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263205.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...   134   6e-30
ref|XP_002533478.1| DNA binding protein, putative [Ricinus commu...   127   1e-27
ref|XP_002301666.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_004164188.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger p...   104   8e-21
ref|XP_004146114.1| PREDICTED: PHD finger protein MALE MEIOCYTE ...   104   8e-21

>ref|XP_002263205.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1 [Vitis
           vinifera] gi|147772045|emb|CAN73422.1| hypothetical
           protein VITISV_032904 [Vitis vinifera]
           gi|296087078|emb|CBI33452.3| unnamed protein product
           [Vitis vinifera]
          Length = 683

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/110 (60%), Positives = 82/110 (74%)
 Frame = -2

Query: 330 VELAVGIVIDRKHFIKEWPFIDEPNQLLRFVCRVLPGLSDLETEFTRGYPSGEHIIVPLH 151
           VELA   V+D KHF+KEWPF DE +QLLRFVC ++P LS+LE  FTR  P GE I+VP +
Sbjct: 473 VELATRAVLDSKHFVKEWPFSDEDDQLLRFVCHMMPSLSELEI-FTRELPPGEFIVVPPY 531

Query: 150 LTCGELKQVVQDAMRDTYYIMERIVVTEISGMEEVDDGEFLFGKVESGSE 1
            T GELK+ V+  +RDTY IME++VVTEI  ME + D E LFG +ESGSE
Sbjct: 532 ATVGELKETVERTLRDTYCIMEQVVVTEIEDMEGMTDEEVLFGTIESGSE 581


>ref|XP_002533478.1| DNA binding protein, putative [Ricinus communis]
           gi|223526671|gb|EEF28910.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 698

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/109 (54%), Positives = 78/109 (71%)
 Frame = -2

Query: 327 ELAVGIVIDRKHFIKEWPFIDEPNQLLRFVCRVLPGLSDLETEFTRGYPSGEHIIVPLHL 148
           ELA   ++D KHF+K WPF DE ++LLRF+C+V+P +  LE E  +  P GE +++PLH 
Sbjct: 479 ELATQTILDSKHFVKVWPFKDEEDELLRFICQVMPNIIHLEVELKKELPPGEIVVLPLHS 538

Query: 147 TCGELKQVVQDAMRDTYYIMERIVVTEISGMEEVDDGEFLFGKVESGSE 1
           T  ELKQ  ++A+RDTY IME   VTEI+ MEE+ D E LFG VESG+E
Sbjct: 539 TVAELKQAAENALRDTYCIMENFEVTEINQMEELMDEELLFGSVESGAE 587


>ref|XP_002301666.1| predicted protein [Populus trichocarpa] gi|222843392|gb|EEE80939.1|
           predicted protein [Populus trichocarpa]
          Length = 591

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/110 (51%), Positives = 77/110 (70%)
 Frame = -2

Query: 330 VELAVGIVIDRKHFIKEWPFIDEPNQLLRFVCRVLPGLSDLETEFTRGYPSGEHIIVPLH 151
           VE+A   ++D KHF+KEWPF  E +QLL F+C+V+P  +DLE +F R  P GE I++PLH
Sbjct: 406 VEVATQAILDSKHFVKEWPFRVENDQLLSFICQVMPTWNDLEAKFHRKAPPGEIIVLPLH 465

Query: 150 LTCGELKQVVQDAMRDTYYIMERIVVTEISGMEEVDDGEFLFGKVESGSE 1
            +  ELKQ  + A+RDTY ++ER VV EI  ME +DD + L   VESG+E
Sbjct: 466 ASVLELKQEAESALRDTYCMLERFVVIEIEHMENLDDKDLLCKFVESGAE 515


>ref|XP_004164188.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein MALE MEIOCYTE
           DEATH 1-like [Cucumis sativus]
          Length = 708

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = -2

Query: 330 VELAVGIVIDRKHFIKEWPFIDEPNQLLRFVCRVLPGLSDLETEF---TRGYPSGEHIIV 160
           VELA   V+D KHF KEWP  DE   LL F+ +++P L+   T+    +   PSGE +++
Sbjct: 472 VELATQGVLDSKHFAKEWPLQDEEEHLLTFIIKLMPRLTFTHTDLELKSDFMPSGEVVVL 531

Query: 159 PLHLTCGELKQVVQDAMRDTYYIMERIVVTEISGMEEVDDGEFLFGKVESGSE 1
           PLH T GE+K+  + A+RDTYY+ E+  V  I  +E  +D E +FG VESG+E
Sbjct: 532 PLHTTIGEVKEAAEKALRDTYYVTEQFEVLAIENLENYEDREVIFGAVESGAE 584


>ref|XP_004146114.1| PREDICTED: PHD finger protein MALE MEIOCYTE DEATH 1-like [Cucumis
           sativus]
          Length = 671

 Score =  104 bits (259), Expect = 8e-21
 Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 3/113 (2%)
 Frame = -2

Query: 330 VELAVGIVIDRKHFIKEWPFIDEPNQLLRFVCRVLPGLSDLETEF---TRGYPSGEHIIV 160
           VELA   V+D KHF KEWP  DE   LL F+ +++P L+   T+    +   PSGE +++
Sbjct: 472 VELATQGVLDSKHFAKEWPLQDEEEHLLTFIIKLMPRLTFTHTDLELKSDFMPSGEVVVL 531

Query: 159 PLHLTCGELKQVVQDAMRDTYYIMERIVVTEISGMEEVDDGEFLFGKVESGSE 1
           PLH T GE+K+  + A+RDTYY+ E+  V  I  +E  +D E +FG VESG+E
Sbjct: 532 PLHTTIGEVKEAAEKALRDTYYVTEQFEVLAIENLENYEDREVIFGAVESGAE 584


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