BLASTX nr result

ID: Bupleurum21_contig00019891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019891
         (2173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21048.3| unnamed protein product [Vitis vinifera]              316   2e-83
ref|XP_002285150.2| PREDICTED: uncharacterized protein LOC100266...   316   2e-83
ref|XP_002515509.1| conserved hypothetical protein [Ricinus comm...   279   3e-72
ref|XP_003603391.1| SYNC1 protein [Medicago truncatula] gi|35549...   268   4e-69
ref|XP_002324299.1| predicted protein [Populus trichocarpa] gi|2...   265   5e-68

>emb|CBI21048.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  316 bits (809), Expect = 2e-83
 Identities = 191/411 (46%), Positives = 244/411 (59%), Gaps = 50/411 (12%)
 Frame = -1

Query: 2014 MPRPGPRPYECVRKAWHSDRHQPIRGSLIQEIFRVVHDIHSPLTKKKKEWQEKLPVVVLK 1835
            MPRPGPRPYECVR+AWHSDRHQPIRGSLIQEIFRVV++IHS  TKK KEWQEKLP+VVLK
Sbjct: 1    MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPIVVLK 60

Query: 1834 AEDIMYSKANSVAEYMDLKTLWDRTNDAISTIIRLDETTETGLFLQPCIEAALHLGCTPR 1655
            AE+IMYSKANS AEYMDLKTLWDR NDAI+TIIR DE+TETG FLQPCIEA+L+LGC  R
Sbjct: 61   AEEIMYSKANSEAEYMDLKTLWDRANDAINTIIRRDESTETGEFLQPCIEASLNLGCPQR 120

Query: 1654 RTSRSQRNITPSYYLSPMGPGTVTVTSSSMQNTTPGNHKITSQTM--------------- 1520
            R SRSQRN  P  YL+P     ++++ S ++N+  GNH   SQ M               
Sbjct: 121  RASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFIKPSSMSVI 180

Query: 1519 ------HDS--HANKASIS---------------CLGMSAQSP----AVCPLYFGDR-QS 1424
                  H +  H N    S               CL M         AV PLY G++ Q 
Sbjct: 181  QPGLEPHSTAFHNNDCPTSKFLFSSENCPPSGNKCLQMEVYPASNVCAVYPLYDGNQLQC 240

Query: 1423 KEAKCASDTAYNLSFHSTDLSKIQVKQNPYGKA-EALSKSTEKYIRDPTGNSYENGCDLS 1247
            +E++C      +   +  + + +   QN +  A +   K ++      T NS +  CDLS
Sbjct: 241  EESQCGFGVQSHPKSNPMEPAGMGTIQNLFSYAIDPTKKPSQTDFGHVTENSPKIDCDLS 300

Query: 1246 LRLGCLGSPCAIIENSIDKDLENLGLGDFQEGKKLTGSSIQIDKS--FFYKSYIRGSVDT 1073
            LRLG L  PC  +ENS  ++ E++G    +EG K +  S Q+DK   FF +      +D+
Sbjct: 301  LRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKFSDLSPQVDKQFPFFPRGNTDDPLDS 360

Query: 1072 CSTDQVIEADKNFMKSTLRKRKAHLS---EDVHFSWRPKL-FRDCSGRMRN 932
            C + +  E +   M++T+RKRKA +S   ED  F  +PKL +    GRMRN
Sbjct: 361  CLSKRSSEGENLNMEATMRKRKAVISYPLEDRQFCCQPKLPYNYLPGRMRN 411


>ref|XP_002285150.2| PREDICTED: uncharacterized protein LOC100266444 [Vitis vinifera]
          Length = 414

 Score =  316 bits (809), Expect = 2e-83
 Identities = 191/411 (46%), Positives = 244/411 (59%), Gaps = 50/411 (12%)
 Frame = -1

Query: 2014 MPRPGPRPYECVRKAWHSDRHQPIRGSLIQEIFRVVHDIHSPLTKKKKEWQEKLPVVVLK 1835
            MPRPGPRPYECVR+AWHSDRHQPIRGSLIQEIFRVV++IHS  TKK KEWQEKLP+VVLK
Sbjct: 1    MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVNEIHSSATKKNKEWQEKLPIVVLK 60

Query: 1834 AEDIMYSKANSVAEYMDLKTLWDRTNDAISTIIRLDETTETGLFLQPCIEAALHLGCTPR 1655
            AE+IMYSKANS AEYMDLKTLWDR NDAI+TIIR DE+TETG FLQPCIEA+L+LGC  R
Sbjct: 61   AEEIMYSKANSEAEYMDLKTLWDRANDAINTIIRRDESTETGEFLQPCIEASLNLGCPQR 120

Query: 1654 RTSRSQRNITPSYYLSPMGPGTVTVTSSSMQNTTPGNHKITSQTM--------------- 1520
            R SRSQRN  P  YL+P     ++++ S ++N+  GNH   SQ M               
Sbjct: 121  RASRSQRNNNPRCYLTPSTQEPISISPSILENSPQGNHTTISQVMSRYATFIKPSSMSVI 180

Query: 1519 ------HDS--HANKASIS---------------CLGMSAQSP----AVCPLYFGDR-QS 1424
                  H +  H N    S               CL M         AV PLY G++ Q 
Sbjct: 181  QPGLEPHSTAFHNNDCPTSKFLFSSENCPPSGNKCLQMEVYPASNVCAVYPLYDGNQLQC 240

Query: 1423 KEAKCASDTAYNLSFHSTDLSKIQVKQNPYGKA-EALSKSTEKYIRDPTGNSYENGCDLS 1247
            +E++C      +   +  + + +   QN +  A +   K ++      T NS +  CDLS
Sbjct: 241  EESQCGFGVQSHPKSNPMEPAGMGTIQNLFSYAIDPTKKPSQTDFGHVTENSPKIDCDLS 300

Query: 1246 LRLGCLGSPCAIIENSIDKDLENLGLGDFQEGKKLTGSSIQIDKS--FFYKSYIRGSVDT 1073
            LRLG L  PC  +ENS  ++ E++G    +EG K +  S Q+DK   FF +      +D+
Sbjct: 301  LRLGPLSIPCVSVENSWPQEFEDVGSSCSREGSKFSDLSPQVDKQFPFFPRGNTDDPLDS 360

Query: 1072 CSTDQVIEADKNFMKSTLRKRKAHLS---EDVHFSWRPKL-FRDCSGRMRN 932
            C + +  E +   M++T+RKRKA +S   ED  F  +PKL +    GRMRN
Sbjct: 361  CLSKRSSEGENLNMEATMRKRKAVISYPLEDRQFCCQPKLPYNYLPGRMRN 411


>ref|XP_002515509.1| conserved hypothetical protein [Ricinus communis]
            gi|223545453|gb|EEF46958.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 600

 Score =  279 bits (713), Expect = 3e-72
 Identities = 137/227 (60%), Positives = 173/227 (76%)
 Frame = +1

Query: 1    VISHWLFSNHDRMPTGTEFDSLIVDGSSEWRKLCDNEPIVNNFPDKHFDLETVLEAGIRP 180
            VI+HWL SN D MPT ++FDSLI +GS EWRKLC+N+  + +FPD HFDLETVL+A +RP
Sbjct: 354  VIAHWLQSNQDFMPTTSQFDSLIAEGSFEWRKLCNNDAYMKSFPDNHFDLETVLKAELRP 413

Query: 181  VLISQEKSFVGFFSPEKFDSLKGGMSFDEISNEIGNMEEKDQSRTYIVSWNDHFFVFKVD 360
            V I   KSF G FSPEKF++L+G  SFD+I  EI ++ ++   R YIVSWNDHFFV K D
Sbjct: 414  VNILSNKSFTGIFSPEKFENLQGAKSFDDIWEEISSITKEYDQRIYIVSWNDHFFVLKAD 473

Query: 361  NEAYYIIDTLGERLYEGCKQAFILKFDKSTLMLGRTGNEVVHADGTTGAENFDGENDEEI 540
              +YYIID+LGERL+EGC QA+ILKFD+STLM G+   EV   +    A+  + E  EEI
Sbjct: 474  ANSYYIIDSLGERLFEGCNQAYILKFDESTLMYGKAAKEVNSEEKVEEAK--EEEESEEI 531

Query: 541  ICKGKDCCWEFIKRFLAAIPLRELEMEEEKKTVSYYSLHQRLQIEFN 681
            ICKGK+CC EFIKRFLAAI +RELE +++K +VS +SL QRLQI+F+
Sbjct: 532  ICKGKECCKEFIKRFLAAILIRELEEQDKKGSVSTFSLLQRLQIDFH 578


>ref|XP_003603391.1| SYNC1 protein [Medicago truncatula] gi|355492439|gb|AES73642.1| SYNC1
            protein [Medicago truncatula]
          Length = 619

 Score =  268 bits (685), Expect = 4e-69
 Identities = 131/233 (56%), Positives = 173/233 (74%), Gaps = 6/233 (2%)
 Frame = +1

Query: 1    VISHWLFSNHDRMPTGTEFDSLIVDGSSEWRKLCDNEPIVNNFPDKHFDLETVLEAGIRP 180
            +ISHWL SN   +PT T+FD+LI  GSSEWRKLC N+    +FPDKHFDLETV++A +RP
Sbjct: 365  LISHWLHSNQG-IPTRTQFDNLITQGSSEWRKLCKNDYYSKHFPDKHFDLETVIDANLRP 423

Query: 181  VLISQEKSFVGFFSPEKFDSLKGGMSFDEISNEIGNMEEKD-----QSRTYIVSWNDHFF 345
            +++  +KS+ GFFSPEKF  L+G MSFDEI NEI N+  K+     + R YIVSWNDHFF
Sbjct: 424  LVVLPQKSYTGFFSPEKFHCLEGAMSFDEIWNEINNINNKNTVVDFEPRIYIVSWNDHFF 483

Query: 346  VFKVDNEAYYIIDTLGERLYEGCKQAFILKFDKSTLMLGRTGNEVVHADGTTGAENFD-G 522
            + KV+ +AYYIID+LGERL+EGC++AF+LKFD S +M G+        +   G ++   G
Sbjct: 484  ILKVEVDAYYIIDSLGERLFEGCQRAFVLKFDDSCVMYGKVDKNEEEVNKDVGTKSSSRG 543

Query: 523  ENDEEIICKGKDCCWEFIKRFLAAIPLRELEMEEEKKTVSYYSLHQRLQIEFN 681
            E   EI+C+GK+CC EFIKRFLAAI +R+LE EE+K +VS   LH++LQI+F+
Sbjct: 544  EESFEIVCRGKECCKEFIKRFLAAISVRQLEKEEKKWSVSNPYLHRQLQIDFH 596


>ref|XP_002324299.1| predicted protein [Populus trichocarpa] gi|222865733|gb|EEF02864.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  265 bits (676), Expect = 5e-68
 Identities = 131/215 (60%), Positives = 163/215 (75%)
 Frame = +1

Query: 37  MPTGTEFDSLIVDGSSEWRKLCDNEPIVNNFPDKHFDLETVLEAGIRPVLISQEKSFVGF 216
           MPT ++FD+LI +GS EWRKLCDNE  +N+FPD HFDLETVL+A +RP+ IS EKSF G 
Sbjct: 1   MPTLSQFDNLITEGSQEWRKLCDNEAYMNSFPDNHFDLETVLKADLRPLTISHEKSFTGI 60

Query: 217 FSPEKFDSLKGGMSFDEISNEIGNMEEKDQSRTYIVSWNDHFFVFKVDNEAYYIIDTLGE 396
           FSP+KF++LKG  SFD+I  EI +     + R YIVSWNDHFFV KVD EAYYIID+LGE
Sbjct: 61  FSPQKFENLKGATSFDDIWQEITSNTNDYEQRIYIVSWNDHFFVLKVDAEAYYIIDSLGE 120

Query: 397 RLYEGCKQAFILKFDKSTLMLGRTGNEVVHADGTTGAENFDGENDEEIICKGKDCCWEFI 576
           RL EGC QA+ILKFD S+LM  +   E V  +   G E    ++ E+IICKGK+CC EFI
Sbjct: 121 RLSEGCGQAYILKFDDSSLMYEKVAKEDVVTEEMAGEER--SKDKEDIICKGKECCKEFI 178

Query: 577 KRFLAAIPLRELEMEEEKKTVSYYSLHQRLQIEFN 681
           KRFLAAIP+ ELE EE++  VS +SL +R+QI+F+
Sbjct: 179 KRFLAAIPVGELEEEEKRGAVSTFSLLKRIQIDFH 213


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