BLASTX nr result

ID: Bupleurum21_contig00019877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019877
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   490   e-136
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   483   e-134
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   472   e-131
ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-l...   471   e-131
gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK...   469   e-130

>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|297743547|emb|CBI36414.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  490 bits (1262), Expect = e-136
 Identities = 240/285 (84%), Positives = 263/285 (92%), Gaps = 1/285 (0%)
 Frame = -3

Query: 854 MEINLEKLPFDLDFHPSNQLVAVGLITGDLHLYRYAADTAPERVFEVSAHS-ESCRAVRF 678
           MEINL KLPFD+DFHPSN LVA GLI GDLHLYRY A++ P+R+ EV AH  ESCRAVRF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGDESCRAVRF 60

Query: 677 INEGRAILTGSPDFSILATDVETGSAIARVENSHGAAVNRLVNLTETTIASGDDDGCVKV 498
           INEG AI+TGSPD SILATDVETGSAIAR+E+SHGAA+NRL+NLTETTIASGDD+GC+KV
Sbjct: 61  INEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIKV 120

Query: 497 WDTRQRSCCNTFSVHEEYISDMTFAADSMKLLATSGDGTLSVCNLRSNKVQTRSEFSEDE 318
           WDTRQ+SCCN+F  HEEYISDMTFA+DSMKLL  SGDGTLSVCNLR NKVQ +SEFSEDE
Sbjct: 121 WDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 317 LLSVVIMKNGRKVICGTQTGALLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEERVIAAS 138
           LLSVVIMKNGRKVICGTQ+GALLLYSWG FKDCSDRF+DLSPNSVDALLKLDE+RVI  S
Sbjct: 181 LLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITGS 240

Query: 137 ENGVISLVGILPNRIIQPIAEHSEYPVERLAFSHEKKFLGSISHD 3
           ENG+ISLVGILPNRIIQPIAEHSEYPVERLAFS ++K+LGSISHD
Sbjct: 241 ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHD 285


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
           gi|298205166|emb|CBI17225.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  483 bits (1244), Expect = e-134
 Identities = 236/285 (82%), Positives = 262/285 (91%), Gaps = 1/285 (0%)
 Frame = -3

Query: 854 MEINLEKLPFDLDFHPSNQLVAVGLITGDLHLYRYAADTAPERVFEVSAHSE-SCRAVRF 678
           MEINL KLPFD+DFHPSN LVA GLI GDLHLYRY A++ P+R+ EV AH E SCRAVRF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGEESCRAVRF 60

Query: 677 INEGRAILTGSPDFSILATDVETGSAIARVENSHGAAVNRLVNLTETTIASGDDDGCVKV 498
           IN+G AI+TGSPD SILATDVETGSAIAR+E+SHGAA++RL+NLTETTIASGDD+GC+KV
Sbjct: 61  INKGHAIVTGSPDRSILATDVETGSAIARLEHSHGAAISRLINLTETTIASGDDEGCIKV 120

Query: 497 WDTRQRSCCNTFSVHEEYISDMTFAADSMKLLATSGDGTLSVCNLRSNKVQTRSEFSEDE 318
           WDTRQ+SCCN+F  HEEYISDMTFA+DSMKLL  SGDGTLSVCNLR NKVQ +SEFSEDE
Sbjct: 121 WDTRQQSCCNSFDAHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 317 LLSVVIMKNGRKVICGTQTGALLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEERVIAAS 138
           LLSVV+MKNGRKVICGTQ+GALLLYSWG FKDCSDRF+DLSPNSVDALLKLDE+ VI  S
Sbjct: 181 LLSVVLMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDSVITGS 240

Query: 137 ENGVISLVGILPNRIIQPIAEHSEYPVERLAFSHEKKFLGSISHD 3
           ENG+ISLVGILPNRIIQPIAEHSEYPVERLAFS ++K+LGSISHD
Sbjct: 241 ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHD 285


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
           gi|355510141|gb|AES91283.1| WD-40 repeat protein
           [Medicago truncatula]
          Length = 420

 Score =  472 bits (1214), Expect = e-131
 Identities = 226/291 (77%), Positives = 260/291 (89%), Gaps = 3/291 (1%)
 Frame = -3

Query: 866 LEFDMEINLEKLPFDLDFHPSNQLVAVGLITGDLHLYRYAADTA---PERVFEVSAHSES 696
           L  +MEINL KL FD+DFHPS  LVA GLI GDLHLYRY++D     P RV EV AH+ES
Sbjct: 58  LLIEMEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTES 117

Query: 695 CRAVRFINEGRAILTGSPDFSILATDVETGSAIARVENSHGAAVNRLVNLTETTIASGDD 516
           CRA RFIN GRA+LTGSPDFSILATDVETGS IAR++N+H AAVNRL+NLTE+T+ASGDD
Sbjct: 118 CRAARFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDD 177

Query: 515 DGCVKVWDTRQRSCCNTFSVHEEYISDMTFAADSMKLLATSGDGTLSVCNLRSNKVQTRS 336
           DGC+KVWDTR+RSCCN+F  HE+YISD+TFA+D+MK+LATSGDGTLSVCNLR NKVQ +S
Sbjct: 178 DGCIKVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQS 237

Query: 335 EFSEDELLSVVIMKNGRKVICGTQTGALLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEE 156
           EFSEDELLSVV+MKNGRKV+CG+QTG LLLYSWG FKDCSDRFVDL+ NS+D +LKLDE+
Sbjct: 238 EFSEDELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDED 297

Query: 155 RVIAASENGVISLVGILPNRIIQPIAEHSEYPVERLAFSHEKKFLGSISHD 3
           R+I  SENG+I+LVGILPNRII+PIAEHSEYPVERLAFSH++KFLGSI HD
Sbjct: 298 RIITGSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHD 348


>ref|XP_003535974.1| PREDICTED: WD repeat-containing protein 55-like [Glycine max]
          Length = 352

 Score =  471 bits (1213), Expect = e-131
 Identities = 223/284 (78%), Positives = 258/284 (90%)
 Frame = -3

Query: 854 MEINLEKLPFDLDFHPSNQLVAVGLITGDLHLYRYAADTAPERVFEVSAHSESCRAVRFI 675
           MEI+L KL FD+DFHPS+ LVA GLITGDLHLYRY  D+ P R+ EV AH+ESCRA RFI
Sbjct: 1   MEISLGKLAFDIDFHPSDNLVAAGLITGDLHLYRYTPDSTPVRMLEVHAHTESCRAARFI 60

Query: 674 NEGRAILTGSPDFSILATDVETGSAIARVENSHGAAVNRLVNLTETTIASGDDDGCVKVW 495
           N GRAILTGSPD SILATDVETGS IAR++++H AAVNRL+NLTE+T+ASGDD+GC+KVW
Sbjct: 61  NGGRAILTGSPDCSILATDVETGSTIARLDDAHEAAVNRLINLTESTVASGDDEGCIKVW 120

Query: 494 DTRQRSCCNTFSVHEEYISDMTFAADSMKLLATSGDGTLSVCNLRSNKVQTRSEFSEDEL 315
           DTR+RSCCN+F+ HE+YISDMTF +D+MKLLATSGDGTLSVCNLR NKVQ +SEFSEDEL
Sbjct: 121 DTRERSCCNSFNAHEDYISDMTFVSDAMKLLATSGDGTLSVCNLRRNKVQAQSEFSEDEL 180

Query: 314 LSVVIMKNGRKVICGTQTGALLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEERVIAASE 135
           LSVV+MKNGRKV+CG+QTG +LLYSWG FKDCSDRF DLS NS+DA+LKLDE+R+I  SE
Sbjct: 181 LSVVLMKNGRKVVCGSQTGVILLYSWGCFKDCSDRFTDLSSNSIDAMLKLDEDRIITGSE 240

Query: 134 NGVISLVGILPNRIIQPIAEHSEYPVERLAFSHEKKFLGSISHD 3
           NG+I+LVGILPNR+IQPIAEHSEYPVE LAFSH+KKFLGSI+HD
Sbjct: 241 NGIINLVGILPNRVIQPIAEHSEYPVECLAFSHDKKFLGSIAHD 284


>gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK43106.1| unknown
           [Medicago truncatula]
          Length = 359

 Score =  469 bits (1207), Expect = e-130
 Identities = 225/287 (78%), Positives = 257/287 (89%), Gaps = 3/287 (1%)
 Frame = -3

Query: 854 MEINLEKLPFDLDFHPSNQLVAVGLITGDLHLYRYAADTA---PERVFEVSAHSESCRAV 684
           MEINL KL FD+DFHPS  LVA GLI GDLHLYRY++D     P RV EV AH+ESCRA 
Sbjct: 1   MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60

Query: 683 RFINEGRAILTGSPDFSILATDVETGSAIARVENSHGAAVNRLVNLTETTIASGDDDGCV 504
           RFIN GRA+LTGSPDFSILATDVETGS IAR++N+H AAVNRL+NLTE+T+ASGDDDGC+
Sbjct: 61  RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120

Query: 503 KVWDTRQRSCCNTFSVHEEYISDMTFAADSMKLLATSGDGTLSVCNLRSNKVQTRSEFSE 324
           KVWDTR+RSCCN+F  HE+YISD+TFA+D+MK+LATSGDGTLSVCNLR NKVQ +SEFSE
Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180

Query: 323 DELLSVVIMKNGRKVICGTQTGALLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEERVIA 144
           DELLSVV+MKNGRKV+CG+QTG LLLYSWG FKDCSDRFVDL+ NS+D +LKLDE R+I 
Sbjct: 181 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEGRIIT 240

Query: 143 ASENGVISLVGILPNRIIQPIAEHSEYPVERLAFSHEKKFLGSISHD 3
            SENG+I+LVGILPNRII+PIAEHSEYPVERLAFSH++KFLGSI HD
Sbjct: 241 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHD 287


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