BLASTX nr result

ID: Bupleurum21_contig00019876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019876
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325559.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002526839.1| protein with unknown function [Ricinus commu...    55   6e-06

>ref|XP_002325559.1| predicted protein [Populus trichocarpa] gi|222862434|gb|EEE99940.1|
           predicted protein [Populus trichocarpa]
          Length = 947

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = -1

Query: 233 MRKRYAEFTSFLLCFFLINSVSAQLNLDQNSTMSKLYDLVTKNTPSSPWKNVKFAENPCS 54
           +++R + F SFL  F L  SV +QL+ +Q +TM  L  L+  N   S W   K   +PCS
Sbjct: 5   VQQRTSLFLSFL--FLLFPSVFSQLSSNQTNTMMNLSKLL--NLSDSLWDATK---DPCS 57

Query: 53  WVGVSCSSDNSSVTGLS 3
           W GV+CSS NSSVT LS
Sbjct: 58  WKGVNCSSGNSSVTSLS 74


>ref|XP_002526839.1| protein with unknown function [Ricinus communis]
           gi|223533843|gb|EEF35574.1| protein with unknown
           function [Ricinus communis]
          Length = 954

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/73 (41%), Positives = 40/73 (54%)
 Frame = -1

Query: 221 YAEFTSFLLCFFLINSVSAQLNLDQNSTMSKLYDLVTKNTPSSPWKNVKFAENPCSWVGV 42
           +  F+   L  FL+      L+ +Q +TM  L  L+  NT SSPW +     NPC W GV
Sbjct: 11  FFSFSISSLFLFLLFPFGFSLSTNQTNTMITLSKLLKNNTASSPW-DATSQPNPCLWKGV 69

Query: 41  SCSSDNSSVTGLS 3
           +CS D +SVT LS
Sbjct: 70  TCSLDGTSVTSLS 82