BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019850
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38481.3| unnamed protein product [Vitis vinifera]              342   5e-92
ref|XP_003594259.1| Thymidine kinase [Medicago truncatula] gi|35...   310   1e-82
ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containi...   308   7e-82
ref|NP_193380.3| pentatricopeptide (PPR) repeat-containing prote...   283   2e-74
ref|XP_002868131.1| predicted protein [Arabidopsis lyrata subsp....   262   6e-68

>emb|CBI38481.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  342 bits (877), Expect = 5e-92
 Identities = 164/236 (69%), Positives = 200/236 (84%)
 Frame = -2

Query: 708 YLDKTLRGLCYSGRLAQAIGLLCRSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIV 529
           +LD+TL+GLC+SGR+ +A+GLLCR+G+ VE  TY LLLQECI ++EF  GRRIH+QM +V
Sbjct: 61  HLDETLKGLCFSGRVMEAVGLLCRTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVV 120

Query: 528 GFVPDEYLKVKLLILYAKSGDLDTARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLY 349
           G+ PDEYLK KLLIL+AK+GDLDT+ ILFD L +K+++SWNAMI GYVQKGLE  GL+LY
Sbjct: 121 GYYPDEYLKTKLLILHAKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLY 180

Query: 348 HSMRQCGFGPDQFTFSSVLRACATLAMLEQGKRAHCLLIKSKIPDNVVVNSALIDMYFKC 169
             MRQ G  PDQ+TF+SV RACATLA LE+GK+AHC++IKS+I +NVVVNSAL+DMYFKC
Sbjct: 181 DEMRQSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKC 240

Query: 168 SCPYDGQLVFDESPVRNVITWTALISGYGQQGRVVEVLEFFNKMISENFKPNYVTF 1
           S  YDG  VF++S  RNVITWTALISGYGQ GRV EVL FF+KM +E F+PNYVTF
Sbjct: 241 SSLYDGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTF 296



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
 Frame = -2

Query: 639 RSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIVGFVPDEYLKVKLLILYAKSGDLD 460
           +SG+  +  T+  + + C        G++ H  M       +  +   L+ +Y K   L 
Sbjct: 185 QSGLTPDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLY 244

Query: 459 TARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLYHSMRQCGFGPDQFTFSSVLRACA 280
               +F++   + V++W A+I GY Q G     L  +  M+  GF P+  TF +V+ AC+
Sbjct: 245 DGHRVFNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACS 304

Query: 279 TLAMLEQGKRAHCLLIKS-KIPDNVVVNSALIDMYFKCSCPYDGQLVFDESPV-RNVITW 106
              ++ +G      + +   I       +A++D+  +    ++       SP   + + W
Sbjct: 305 HGGLVNEGWEYFMSMTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSPCGEHSVIW 364

Query: 105 TALISGYGQQGRVVEVLEFFNK 40
            AL+      G  +++L F  K
Sbjct: 365 GALLGACRVHGN-IDMLRFAAK 385


>ref|XP_003594259.1| Thymidine kinase [Medicago truncatula] gi|355483307|gb|AES64510.1|
           Thymidine kinase [Medicago truncatula]
          Length = 644

 Score =  310 bits (795), Expect = 1e-82
 Identities = 152/235 (64%), Positives = 188/235 (80%)
 Frame = -2

Query: 705 LDKTLRGLCYSGRLAQAIGLLCRSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIVG 526
           LDK L+GLC SG+L  AI LL R+G  V  +TY L+LQECI  + +G GRRIH+ M IVG
Sbjct: 142 LDKVLQGLCVSGKLEDAIRLLYRTGFPVHPRTYSLMLQECIFWKNYGRGRRIHAHMIIVG 201

Query: 525 FVPDEYLKVKLLILYAKSGDLDTARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLYH 346
           +VP+EYLK+KLLILYAKSG L+TA+ LF+ L EK   +WNAMI GYVQKGLE VGL  ++
Sbjct: 202 YVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFY 261

Query: 345 SMRQCGFGPDQFTFSSVLRACATLAMLEQGKRAHCLLIKSKIPDNVVVNSALIDMYFKCS 166
            MRQ    PDQ+TF+SV RACATLA+LE G++AH +++K +I DNVVVNSALIDMYFKCS
Sbjct: 262 EMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCS 321

Query: 165 CPYDGQLVFDESPVRNVITWTALISGYGQQGRVVEVLEFFNKMISENFKPNYVTF 1
           C  DG+L+FD+   RN ITWT LISGYG+ G+VVEVL+ F++MISE+F+PNYVTF
Sbjct: 322 CICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTF 376


>ref|XP_004134800.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g16470-like [Cucumis sativus]
           gi|449526397|ref|XP_004170200.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g16470-like [Cucumis sativus]
          Length = 486

 Score =  308 bits (789), Expect = 7e-82
 Identities = 151/234 (64%), Positives = 187/234 (79%)
 Frame = -2

Query: 702 DKTLRGLCYSGRLAQAIGLLCRSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIVGF 523
           DKTLRGLC +G+LA+A+ LLC   +   S+TY LLLQECI ++E+  G+RIH+QM +VG+
Sbjct: 60  DKTLRGLCLTGKLAEAVALLCCMALQFHSKTYCLLLQECIFRKEYMKGKRIHAQMVVVGY 119

Query: 522 VPDEYLKVKLLILYAKSGDLDTARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLYHS 343
           VP+EYL  KLLILYAKSGDL+TA +L + L EK++VSWN++I GYVQKGL  VGL  Y  
Sbjct: 120 VPNEYLNTKLLILYAKSGDLETAYVLHEHLLEKSLVSWNSLIAGYVQKGLAEVGLEFYLK 179

Query: 342 MRQCGFGPDQFTFSSVLRACATLAMLEQGKRAHCLLIKSKIPDNVVVNSALIDMYFKCSC 163
           MRQ G  PDQ+TF+SVLRACA+LA LE GKRAH +LIK +I DNVVV+SAL+DMYFKCS 
Sbjct: 180 MRQSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSS 239

Query: 162 PYDGQLVFDESPVRNVITWTALISGYGQQGRVVEVLEFFNKMISENFKPNYVTF 1
             DG   F++S  RNVITWTALISGYGQ GR+ EVLE F+ MI++ ++PNYVTF
Sbjct: 240 LSDGHKAFNKSSNRNVITWTALISGYGQHGRISEVLESFHSMINKGYRPNYVTF 293



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 35/138 (25%), Positives = 62/138 (44%)
 Frame = -2

Query: 639 RSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIVGFVPDEYLKVKLLILYAKSGDLD 460
           +SG+  +  T+  +L+ C        G+R H  +       +  +   L+ +Y K   L 
Sbjct: 182 QSGLMPDQYTFASVLRACASLASLEHGKRAHGVLIKCQIGDNVVVSSALVDMYFKCSSLS 241

Query: 459 TARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLYHSMRQCGFGPDQFTFSSVLRACA 280
                F++   + V++W A+I GY Q G     L  +HSM   G+ P+  TF +VL AC+
Sbjct: 242 DGHKAFNKSSNRNVITWTALISGYGQHGRISEVLESFHSMINKGYRPNYVTFLAVLAACS 301

Query: 279 TLAMLEQGKRAHCLLIKS 226
               + +      L+ K+
Sbjct: 302 RGGFVSEAWNYFSLMTKT 319


>ref|NP_193380.3| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana] gi|223635634|sp|O23491.2|PP315_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g16470 gi|332658358|gb|AEE83758.1| pentatricopeptide
           (PPR) repeat-containing protein [Arabidopsis thaliana]
          Length = 501

 Score =  283 bits (725), Expect = 2e-74
 Identities = 142/235 (60%), Positives = 176/235 (74%)
 Frame = -2

Query: 705 LDKTLRGLCYSGRLAQAIGLLCRSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIVG 526
           LDKTL+GLC +GRL +A+GLL  SG+ VE +TY +LLQEC  ++E+  G+RIH+QM +VG
Sbjct: 79  LDKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVG 138

Query: 525 FVPDEYLKVKLLILYAKSGDLDTARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLYH 346
           F  +EYLKVKLLILYA SGDL TA ILF  L+ + ++ WNAMI GYVQKGLE  GL +Y+
Sbjct: 139 FALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198

Query: 345 SMRQCGFGPDQFTFSSVLRACATLAMLEQGKRAHCLLIKSKIPDNVVVNSALIDMYFKCS 166
            MRQ    PDQ+TF+SV RAC+ L  LE GKRAH ++IK  I  N++V+SAL+DMYFKCS
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258

Query: 165 CPYDGQLVFDESPVRNVITWTALISGYGQQGRVVEVLEFFNKMISENFKPNYVTF 1
              DG  VFD+   RNVITWT+LISGYG  G+V EVL+ F KM  E  +PN VTF
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTF 313


>ref|XP_002868131.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313967|gb|EFH44390.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  262 bits (669), Expect = 6e-68
 Identities = 133/235 (56%), Positives = 168/235 (71%)
 Frame = -2

Query: 705 LDKTLRGLCYSGRLAQAIGLLCRSGMAVESQTYRLLLQECIHQEEFGGGRRIHSQMTIVG 526
           LDKTL+GLC +GRL +A+GLL RS + VE +TY +LLQEC  ++E+  G+RIH+QM +VG
Sbjct: 79  LDKTLKGLCVTGRLKEAVGLLWRSRLQVEPETYAVLLQECKQRKEYTKGKRIHAQMIVVG 138

Query: 525 FVPDEYLKVKLLILYAKSGDLDTARILFDQLREKTVVSWNAMIGGYVQKGLEVVGLSLYH 346
           + P+EYLKVKLLILYA    LD             ++ WNAMI GYVQKGLE  GL +Y+
Sbjct: 139 YAPNEYLKVKLLILYA----LD-------------LIPWNAMISGYVQKGLEQEGLYIYY 181

Query: 345 SMRQCGFGPDQFTFSSVLRACATLAMLEQGKRAHCLLIKSKIPDNVVVNSALIDMYFKCS 166
            MRQ G  PDQ+TF+SV R C+ LA LE GKRAH ++IK  I  N++V+SAL+DMYFKCS
Sbjct: 182 DMRQNGIVPDQYTFASVFRVCSALASLEHGKRAHAVMIKRHIKSNIIVDSALVDMYFKCS 241

Query: 165 CPYDGQLVFDESPVRNVITWTALISGYGQQGRVVEVLEFFNKMISENFKPNYVTF 1
              DG  VFD+   RNV+TWT+L+SGYG  G+V EVL+ F KM  E  +PN VTF
Sbjct: 242 SFSDGHKVFDQLSTRNVVTWTSLMSGYGYHGKVSEVLKCFEKMKEEGCRPNPVTF 296