BLASTX nr result

ID: Bupleurum21_contig00019846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019846
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281...   317   3e-84
emb|CBI24294.3| unnamed protein product [Vitis vinifera]              298   9e-79
ref|XP_002266116.1| PREDICTED: transcription factor GAMYB-like [...   294   1e-77
emb|CAN63791.1| hypothetical protein VITISV_037981 [Vitis vinifera]   294   1e-77
ref|XP_002313492.1| predicted protein [Populus trichocarpa] gi|2...   293   2e-77

>ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281634|gb|ABM53274.1|
           GAMYB-like2 [Solanum lycopersicum]
          Length = 504

 Score =  317 bits (811), Expect = 3e-84
 Identities = 168/286 (58%), Positives = 199/286 (69%), Gaps = 20/286 (6%)
 Frame = +2

Query: 2   YVNEHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPDLKKGSFTPDEERRIIELHAKMGN 181
           YV +HGEGNWNAVQKHSGL+RCGKSCRLRWANHLRPDLKKG+FTP+EER IIELHAKMGN
Sbjct: 53  YVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTPEEERHIIELHAKMGN 112

Query: 182 KWARMAAELPGRTDNEIKNFWNTRIKRRQRAGLPIYPPDICLQNLDDNHSSQDMSSFSTA 361
           KWARMAAELPGRTDNEIKN+WNTRIKRRQRAGLPIYP DIC Q++ +N  ++++ +FS+A
Sbjct: 113 KWARMAAELPGRTDNEIKNYWNTRIKRRQRAGLPIYPSDICFQSITENKQNEELGTFSSA 172

Query: 362 DTPYPKLLPTNNLEIPSVEFEYLEVNQQLYPS----------FPDPASGLLTPPLGSTAS 511
           D+ YP   P  N EIP+VEF+ LE NQ L P              P   LL   L S   
Sbjct: 173 DSQYPDFFPM-NYEIPAVEFKRLEFNQHLCPPALLDIPTGGILDIPGRSLLAQGLNSAYY 231

Query: 512 TGYMLSTMHPGKRLREPESLLPGLNGIVS----DV-LPTFSVYQDDGSRKVAKVSRGSFY 676
           +   LST  P KR+R  ESL  GLNG  S    DV   T   +QDDGS     +   S +
Sbjct: 232 SRSFLSTTPPAKRIRGSESLFSGLNGDCSPSKNDVSFSTCHQHQDDGSLLAQSMGFSSSF 291

Query: 677 DFNF-----PSSPCLLPGSHALINGYSSSNPISWATKLELPSTQNS 799
           + N      PSS  ++PGSHAL+NG++SS+  SWA KLELPS Q++
Sbjct: 292 NQNLTSDYHPSSLGVIPGSHALLNGHTSSSEPSWAKKLELPSLQST 337


>emb|CBI24294.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  298 bits (763), Expect = 9e-79
 Identities = 156/273 (57%), Positives = 181/273 (66%), Gaps = 4/273 (1%)
 Frame = +2

Query: 2   YVNEHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPDLKKGSFTPDEERRIIELHAKMGN 181
           YV +HGEGNWNAV KHSGLSRCGKSCRLRWANHLRPDLKKG+FTP+EE RIIELHA+MGN
Sbjct: 45  YVTKHGEGNWNAVMKHSGLSRCGKSCRLRWANHLRPDLKKGAFTPEEEHRIIELHARMGN 104

Query: 182 KWARMAAELPGRTDNEIKNFWNTRIKRRQRAGLPIYPPDICLQNLDDNHSSQDMSSFSTA 361
           KWARMAAELPGRTDNEIKN+WNTRIKR QRAGLPIYPPD+ ++ L+ +  SQ M S +T 
Sbjct: 105 KWARMAAELPGRTDNEIKNYWNTRIKRLQRAGLPIYPPDVSMKALNGSQQSQSMGSLTTG 164

Query: 362 DTPYPKLLPTNNLEIPSVEFEYLEVNQQLYP----SFPDPASGLLTPPLGSTASTGYMLS 529
           +     LL  N+ EIP+V+F+ L+ N  +YP     F    SG LT  LGS+    +M  
Sbjct: 165 EASPSDLLQGNSFEIPAVQFKNLQ-NPGIYPYPPTYFDILPSGSLTQNLGSSDGQNFMFP 223

Query: 530 TMHPGKRLREPESLLPGLNGIVSDVLPTFSVYQDDGSRKVAKVSRGSFYDFNFPSSPCLL 709
            MHP KR RE E+   GLN   S+  P   +Y D                       C L
Sbjct: 224 AMHPPKRFRESETFFSGLNDDFSNAFPALDLYDD----------------------TCGL 261

Query: 710 PGSHALINGYSSSNPISWATKLELPSTQNSDTQ 808
           PGSHAL NG  SS PIS A K+ELPS Q S+ Q
Sbjct: 262 PGSHALSNGNFSSEPISGAMKVELPSLQYSEAQ 294


>ref|XP_002266116.1| PREDICTED: transcription factor GAMYB-like [Vitis vinifera]
          Length = 524

 Score =  294 bits (753), Expect = 1e-77
 Identities = 158/288 (54%), Positives = 188/288 (65%), Gaps = 19/288 (6%)
 Frame = +2

Query: 2   YVNEHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPDLKKGSFTPDEERRIIELHAKMGN 181
           YV +HGEGNWNAV KHSGLSRCGKSCRLRWANHLRPDLKKG+FTP+EE RIIELHA+MGN
Sbjct: 45  YVTKHGEGNWNAVMKHSGLSRCGKSCRLRWANHLRPDLKKGAFTPEEEHRIIELHARMGN 104

Query: 182 KWARMAAELPGRTDNEIKNFWNTRIKRRQRAGLPIYPPDICLQNLDDNHSSQDMSSFSTA 361
           KWARMAAELPGRTDNEIKN+WNTRIKR QRAGLPIYPPD+ ++ L+ +  SQ M S +T 
Sbjct: 105 KWARMAAELPGRTDNEIKNYWNTRIKRLQRAGLPIYPPDVSMKALNGSQQSQSMGSLTTG 164

Query: 362 DTPYPKLLPTNNLEIPSVEFEYLEVNQQLYP----SFPDPASGLLTPPLGSTASTGYMLS 529
           +     LL  N+ EIP+V+F+ L+ N  +YP     F    SG LT  LGS+    +M  
Sbjct: 165 EASPSDLLQGNSFEIPAVQFKNLQ-NPGIYPYPPTYFDILPSGSLTQNLGSSDGQNFMFP 223

Query: 530 TMHPGKRLREPESLLPGLNGIVSDVLPT------------FSVYQDDGSRKVAKVSRGSF 673
            MHP KR RE E+   GLN   S+  P             + +Y D   +        S 
Sbjct: 224 AMHPPKRFRESETFFSGLNDDFSNAFPALDLYDDTCDNNPYYLYDDTCEKNPQPFEWSSS 283

Query: 674 YDFNFPSSPCL---LPGSHALINGYSSSNPISWATKLELPSTQNSDTQ 808
           YD +  ++      LPGSHAL NG  SS PIS A K+ELPS Q S+ Q
Sbjct: 284 YDPDLSTNLTSLGGLPGSHALSNGNFSSEPISGAMKVELPSLQYSEAQ 331


>emb|CAN63791.1| hypothetical protein VITISV_037981 [Vitis vinifera]
          Length = 460

 Score =  294 bits (753), Expect = 1e-77
 Identities = 158/288 (54%), Positives = 188/288 (65%), Gaps = 19/288 (6%)
 Frame = +2

Query: 2   YVNEHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPDLKKGSFTPDEERRIIELHAKMGN 181
           YV +HGEGNWNAV KHSGLSRCGKSCRLRWANHLRPDLKKG+FTP+EE RIIELHA+MGN
Sbjct: 45  YVTKHGEGNWNAVMKHSGLSRCGKSCRLRWANHLRPDLKKGAFTPEEEHRIIELHARMGN 104

Query: 182 KWARMAAELPGRTDNEIKNFWNTRIKRRQRAGLPIYPPDICLQNLDDNHSSQDMSSFSTA 361
           KWARMAAELPGRTDNEIKN+WNTRIKR QRAGLPIYPPD+ ++ L+ +  SQ M S +T 
Sbjct: 105 KWARMAAELPGRTDNEIKNYWNTRIKRLQRAGLPIYPPDVSMKALNGSQQSQSMGSLTTG 164

Query: 362 DTPYPKLLPTNNLEIPSVEFEYLEVNQQLYP----SFPDPASGLLTPPLGSTASTGYMLS 529
           +     LL  N+ EIP+V+F+ L+ N  +YP     F    SG LT  LGS+    +M  
Sbjct: 165 EASPSDLLQGNSFEIPAVQFKNLQ-NPGIYPYPPTYFDILPSGSLTQNLGSSDGQNFMFP 223

Query: 530 TMHPGKRLREPESLLPGLNGIVSDVLPT------------FSVYQDDGSRKVAKVSRGSF 673
            MHP KR RE E+   GLN   S+  P             + +Y D   +        S 
Sbjct: 224 AMHPPKRFRESETFFSGLNDDFSNAFPALDLYDDTCDNNPYYLYDDTCEKNPQPFEWSSS 283

Query: 674 YDFNFPSSPCL---LPGSHALINGYSSSNPISWATKLELPSTQNSDTQ 808
           YD +  ++      LPGSHAL NG  SS PIS A K+ELPS Q S+ Q
Sbjct: 284 YDPDLSTNLTSLGGLPGSHALSNGNFSSEPISGAMKVELPSLQYSEAQ 331


>ref|XP_002313492.1| predicted protein [Populus trichocarpa] gi|222849900|gb|EEE87447.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  293 bits (751), Expect = 2e-77
 Identities = 158/281 (56%), Positives = 193/281 (68%), Gaps = 12/281 (4%)
 Frame = +2

Query: 2   YVNEHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPDLKKGSFTPDEERRIIELHAKMGN 181
           YV +HGEGNWNAVQKHSGL RCGKSCRLRWANHLRPDLKKG+FTP+EE RIIELHA MGN
Sbjct: 54  YVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHLRPDLKKGAFTPEEENRIIELHATMGN 113

Query: 182 KWARMAAELPGRTDNEIKNFWNTRIKRRQRAGLPIYPPDICLQNLDDNHSSQDMSSFSTA 361
           KWARMAAELPGRTDNEIKN+WNTRIKR QR GLPIYPPD+CLQ        Q+M +  T 
Sbjct: 114 KWARMAAELPGRTDNEIKNYWNTRIKRLQRTGLPIYPPDVCLQLYKTIQDGQNMGTLQTG 173

Query: 362 DTPYPKLLPTNNLEIPSVEFEYLEVNQQL--YPS--FPDPASGLLTPPLGSTASTGYMLS 529
           DT  P L+ T++ +IP VEF+ LE++Q +  Y S  F    S +L   +GS+     +  
Sbjct: 174 DTCDPDLMQTDHFKIPEVEFKNLELSQDVLSYSSVLFDTSPSSMLKQGVGSSYGNALVFP 233

Query: 530 TMHPGKRLREPESLLPGLNGIVSDVLPTFSVYQDDGSRKVAKVS-RGSFYD-----FNFP 691
           T+HP KRLRE +++  GL+G V   +P F    D    K+ + S   S YD     ++ P
Sbjct: 234 TIHPAKRLRESQTIFTGLDGCVGRGMPVFDQLTDYPCGKIIEHSGLSSPYDPDLSTYDQP 293

Query: 692 SSPCLLPGSHALINGYSSSN--PISWATKLELPSTQNSDTQ 808
           S   +LPGSHA++N  SSS+  PI    KLELPS Q S++Q
Sbjct: 294 SWD-VLPGSHAILNDNSSSSNVPICGTMKLELPSLQYSESQ 333