BLASTX nr result

ID: Bupleurum21_contig00019841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019841
         (1647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275719.1| PREDICTED: uncharacterized WD repeat-contain...   612   e-173
emb|CBI17455.3| unnamed protein product [Vitis vinifera]              604   e-170
ref|XP_002521518.1| WD-repeat protein, putative [Ricinus communi...   600   e-169
ref|XP_002334041.1| predicted protein [Populus trichocarpa] gi|2...   595   e-167
ref|XP_004165621.1| PREDICTED: uncharacterized WD repeat-contain...   582   e-164

>ref|XP_002275719.1| PREDICTED: uncharacterized WD repeat-containing protein
            C17D11.16-like [Vitis vinifera]
          Length = 493

 Score =  612 bits (1579), Expect = e-173
 Identities = 312/477 (65%), Positives = 365/477 (76%), Gaps = 5/477 (1%)
 Frame = +1

Query: 4    EPPSKEEIEMLIKSGILDGSGDGEIERDDEDMDVEYVKEADEVAQALLVANALEKSSKTI 183
            EPPSKEEIE ++K+G L+  GD E E DDE MD +  K+ D VA AL  A+AL K+ K  
Sbjct: 21   EPPSKEEIEEMLKNGALERCGDSESEEDDEIMDADAAKQDDTVAHALAAADALGKTPKN- 79

Query: 184  KGTNFQDIEDGLRXXXXXXXXXXXXXXXXLFSKGLGTTYYPSNDVDPYLKDKDGNDSEDL 363
             GT+F DI DGL+                +FSKGLG TYYPSND+DPYLKD + +DSE++
Sbjct: 80   SGTSFLDITDGLKELDMDHYDDEDDGIE-VFSKGLGDTYYPSNDMDPYLKDNNDDDSEEV 138

Query: 364  EDMIIKAEDSVIICACNEDDVSHLEIWILEDILEGDRNMFIHHDIMLPAFPLCMAWLDCP 543
            EDM IKAEDSVI+CA N DD+SHLE+WI E+  +GD NM++HHD+++PAFPLC AWLDCP
Sbjct: 139  EDMTIKAEDSVIVCARNADDLSHLEVWIFEESEDGDSNMYVHHDVIIPAFPLCTAWLDCP 198

Query: 544  IKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSQVLGGIAEXXXXXXXGTQRSIKYKKGS 723
            +KGGEKGNFIAVGSME +IEIWDLDI+DEVQP  VLGG+AE        T  S+KY+KGS
Sbjct: 199  LKGGEKGNFIAVGSMETSIEIWDLDIIDEVQPFLVLGGVAEKKKKKAKKT--SVKYRKGS 256

Query: 724  HTDSVLGLAWNN--RNLLASASADNLVKIWDVATGECNITMEHHTDKVQAVAWEQSTADK 897
            HTDSVLGLAWN   RN+LASASAD LVKIWDV +GECNITM+HHTDKVQ VAW       
Sbjct: 257  HTDSVLGLAWNKEYRNILASASADKLVKIWDVTSGECNITMDHHTDKVQVVAWNH----H 312

Query: 898  SPNILLSGSFDHSVVMKDVRTPEHTKIKWSVNADVESLAWDPHTEHSFVVSLENGIVAGF 1077
             P +LLSGSFD SVVMKD R P H   KWSV ADVESLAWDPHT HSFVVSLE+G V GF
Sbjct: 313  EPQVLLSGSFDRSVVMKDGRIPTHAGFKWSVTADVESLAWDPHTNHSFVVSLEDGTVQGF 372

Query: 1078 DTRGA--ESSPSPKPSFTLKAHDKAVSSISYSPSIRNLLATGSTDKMVKLWDLSNDQPSC 1251
            D R A  +S+   KP+FTL AHD+AV +ISY+P   N LATGSTDKMVKLWDLSN+QPSC
Sbjct: 373  DVRTAKSDSASESKPAFTLHAHDQAVCTISYNPLAPNFLATGSTDKMVKLWDLSNNQPSC 432

Query: 1252 VASKNPKAGAVFSISFSKDSPYLLAVGGSKGNLEVWDT-SDAWISRKHGKQCNQNYS 1419
            VA++NPKAGAVFSISFS+D P+LLA+GGS G LEVWDT S+A +SRK G   +Q+ S
Sbjct: 433  VATRNPKAGAVFSISFSEDRPFLLAIGGSTGKLEVWDTLSEAPVSRKFGNYSSQSIS 489


>emb|CBI17455.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  604 bits (1557), Expect = e-170
 Identities = 310/477 (64%), Positives = 363/477 (76%), Gaps = 5/477 (1%)
 Frame = +1

Query: 4    EPPSKEEIEMLIKSGILDGSGDGEIERDDEDMDVEYVKEADEVAQALLVANALEKSSKTI 183
            EPPSKEEIE ++K+G L+  GD E E DDE MD +  K+ D VA AL  A+AL K+ K  
Sbjct: 21   EPPSKEEIEEMLKNGALERCGDSESEEDDEIMDADAAKQDDTVAHALAAADALGKTPKN- 79

Query: 184  KGTNFQDIEDGLRXXXXXXXXXXXXXXXXLFSKGLGTTYYPSNDVDPYLKDKDGNDSEDL 363
             GT+F DI DGL+                +FSKGLG TYYPSND+DPYLKD + +DSE++
Sbjct: 80   SGTSFLDITDGLKELDMDHYDDEDDGIE-VFSKGLGDTYYPSNDMDPYLKDNNDDDSEEV 138

Query: 364  EDMIIKAEDSVIICACNEDDVSHLEIWILEDILEGDRNMFIHHDIMLPAFPLCMAWLDCP 543
            EDM IKAEDSVI+CA N DD+SHLE+WI E+  +GD NM++HHD+++PAFPLC AWLDCP
Sbjct: 139  EDMTIKAEDSVIVCARNADDLSHLEVWIFEESEDGDSNMYVHHDVIIPAFPLCTAWLDCP 198

Query: 544  IKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSQVLGGIAEXXXXXXXGTQRSIKYKKGS 723
            +KGGEKGNFIAVGSME +IEIWDLDI+DEVQP  VLGG+AE        T  S+KY+KGS
Sbjct: 199  LKGGEKGNFIAVGSMETSIEIWDLDIIDEVQPFLVLGGVAEKKKKKAKKT--SVKYRKGS 256

Query: 724  HTDSVLGLAWNN--RNLLASASADNLVKIWDVATGECNITMEHHTDKVQAVAWEQSTADK 897
            HTDSVLGLAWN   RN+LASASAD LVKIWDV +GECNITM+HHTDK   VAW       
Sbjct: 257  HTDSVLGLAWNKEYRNILASASADKLVKIWDVTSGECNITMDHHTDKA-IVAWNH----H 311

Query: 898  SPNILLSGSFDHSVVMKDVRTPEHTKIKWSVNADVESLAWDPHTEHSFVVSLENGIVAGF 1077
             P +LLSGSFD SVVMKD R P H   KWSV ADVESLAWDPHT HSFVVSLE+G V GF
Sbjct: 312  EPQVLLSGSFDRSVVMKDGRIPTHAGFKWSVTADVESLAWDPHTNHSFVVSLEDGTVQGF 371

Query: 1078 DTRGA--ESSPSPKPSFTLKAHDKAVSSISYSPSIRNLLATGSTDKMVKLWDLSNDQPSC 1251
            D R A  +S+   KP+FTL AHD+AV +ISY+P   N LATGSTDKMVKLWDLSN+QPSC
Sbjct: 372  DVRTAKSDSASESKPAFTLHAHDQAVCTISYNPLAPNFLATGSTDKMVKLWDLSNNQPSC 431

Query: 1252 VASKNPKAGAVFSISFSKDSPYLLAVGGSKGNLEVWDT-SDAWISRKHGKQCNQNYS 1419
            VA++NPKAGAVFSISFS+D P+LLA+GGS G LEVWDT S+A +SRK G   +Q+ S
Sbjct: 432  VATRNPKAGAVFSISFSEDRPFLLAIGGSTGKLEVWDTLSEAPVSRKFGNYSSQSIS 488


>ref|XP_002521518.1| WD-repeat protein, putative [Ricinus communis]
            gi|223539196|gb|EEF40789.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 493

 Score =  600 bits (1546), Expect = e-169
 Identities = 310/477 (64%), Positives = 363/477 (76%), Gaps = 6/477 (1%)
 Frame = +1

Query: 1    AEPPSKEEIEMLIKSGILDGSGDGEIERDDEDMDVEYVKEADEVAQALLVANALEKSSK- 177
            AEPPSKEEIE +I SG LD   D   E+DDE+M+++  K+ +EV QAL VA+AL ++ K 
Sbjct: 20   AEPPSKEEIEEMINSGALDRGEDSGSEKDDENMEIDNSKQNNEVDQALAVADALGRAPKS 79

Query: 178  TIKGTNFQDIEDGLRXXXXXXXXXXXXXXXXLFSKGLGTTYYPSNDVDPYLKDKDGNDSE 357
            TIK   F DI +GL+                LFS GLG  YYPSN+ DPYL D D  DSE
Sbjct: 80   TIK---FDDITEGLKELDMDNYDEEDEGIE-LFSTGLGDLYYPSNEADPYLNDNDDEDSE 135

Query: 358  DLEDMIIKAEDSVIICACNEDDVSHLEIWILEDILEGDRNMFIHHDIMLPAFPLCMAWLD 537
            DLEDM I  +D+VI+CA NED+ SHLE+WI+E+  +GD NM++HHDI+L AFPLC AWLD
Sbjct: 136  DLEDMTINPKDAVIVCARNEDEFSHLEVWIIEESDDGDSNMYVHHDIILSAFPLCTAWLD 195

Query: 538  CPIKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSQVLGGIAEXXXXXXXGTQRSIKYKK 717
            CP+KG EKGNFIAVGSMEP+IEIWDLDI+DEVQPS VLGG+AE       G + SIKYK+
Sbjct: 196  CPLKGAEKGNFIAVGSMEPSIEIWDLDIVDEVQPSVVLGGVAE-KKKKKKGKKTSIKYKE 254

Query: 718  GSHTDSVLGLAWNN--RNLLASASADNLVKIWDVATGECNITMEHHTDKVQAVAWEQSTA 891
            GSHTDSVLGLAWN   RN+LASASAD  VKIWDVATG+C+ITMEHHTDKVQAVAW     
Sbjct: 255  GSHTDSVLGLAWNKQFRNILASASADKQVKIWDVATGKCDITMEHHTDKVQAVAWNY--- 311

Query: 892  DKSPNILLSGSFDHSVVMKDVRTPEHTKIKWSVNADVESLAWDPHTEHSFVVSLENGIVA 1071
               P +LLSGSFDHSVV+KD R P H   KW V ADVESLAWDPH  HSFVVSLE+G V 
Sbjct: 312  -HEPQVLLSGSFDHSVVLKDGRIPTHPGFKWYVTADVESLAWDPHNTHSFVVSLEDGTVQ 370

Query: 1072 GFDTRGA--ESSPSPKPSFTLKAHDKAVSSISYSPSIRNLLATGSTDKMVKLWDLSNDQP 1245
            GFD R A  +S+   KPSFTL AHDKAV ++SY+PS+ NLLATGSTDKMVKLWDLSN+QP
Sbjct: 371  GFDIRTAKTDSTSDSKPSFTLHAHDKAVCTVSYNPSVPNLLATGSTDKMVKLWDLSNNQP 430

Query: 1246 SCVASKNPKAGAVFSISFSKDSPYLLAVGGSKGNLEVWD-TSDAWISRKHGKQCNQN 1413
            SCVASK+PKAG +FSISFS+DSP+ LA+GGSKG L+VWD +SDA +SR+      QN
Sbjct: 431  SCVASKDPKAGGIFSISFSEDSPFSLAIGGSKGKLQVWDISSDAGVSRRFMNSSKQN 487


>ref|XP_002334041.1| predicted protein [Populus trichocarpa] gi|222839644|gb|EEE77967.1|
            predicted protein [Populus trichocarpa]
          Length = 489

 Score =  595 bits (1533), Expect = e-167
 Identities = 307/472 (65%), Positives = 362/472 (76%), Gaps = 7/472 (1%)
 Frame = +1

Query: 1    AEPPSKEEIEMLIKSGILDGSG-DGEIERDDEDMDVEYVKEADEVAQALLVANALEKSSK 177
            A+PPSKEEIE LIK+  L+ SG D   E DD++MDV   K+  EV+QAL VANAL +SSK
Sbjct: 20   ADPPSKEEIEELIKASDLERSGEDSGSEEDDQEMDVGAAKQTGEVSQALAVANALGRSSK 79

Query: 178  TIKG-TNFQDIEDGLRXXXXXXXXXXXXXXXXLFSKGLGTTYYPSNDVDPYLKDKDGNDS 354
              K  T F DI DGL+                LFS GLG  YYPSN +DPY+KD+D +DS
Sbjct: 80   VNKSETKFDDIADGLKELDMDNYDDEEDGIE-LFSTGLGDLYYPSNSMDPYIKDEDDDDS 138

Query: 355  EDLEDMIIKAEDSVIICACNEDDVSHLEIWILEDILEGDRNMFIHHDIMLPAFPLCMAWL 534
            EDLEDM IK +D+VI+CACN+D+ S+LE+WIL++  +GD N+++HH++ L AFPLC AWL
Sbjct: 139  EDLEDMAIKPKDAVIVCACNKDEFSNLEVWILDETSDGDSNIYVHHEVPLSAFPLCTAWL 198

Query: 535  DCPIKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSQVLGGIAEXXXXXXXGTQRSIKYK 714
            DCP+KGGEKGNFIAVGSMEPAIEIWDLDI+DEVQP+ VLGGI E       G + SIKYK
Sbjct: 199  DCPLKGGEKGNFIAVGSMEPAIEIWDLDIIDEVQPAVVLGGI-EEKKKKKKGKKVSIKYK 257

Query: 715  KGSHTDSVLGLAWNN--RNLLASASADNLVKIWDVATGECNITMEHHTDKVQAVAWEQST 888
            +GSHTDSVLGLAWN   RN+LASASAD  VKIWDV  G+C+ITMEHHTDKVQAVAW    
Sbjct: 258  EGSHTDSVLGLAWNKHFRNILASASADKQVKIWDVDAGKCDITMEHHTDKVQAVAWNH-- 315

Query: 889  ADKSPNILLSGSFDHSVVMKDVRTPEHTKIKWSVNADVESLAWDPHTEHSFVVSLENGIV 1068
                P +LLSGSFD SVVMKD R P     KWSV ADVESLAWDPH +H FVVSLE+G V
Sbjct: 316  --HEPQVLLSGSFDRSVVMKDGRLPSDPGFKWSVTADVESLAWDPHDKHLFVVSLEDGTV 373

Query: 1069 AGFDTRGAESSPSP--KPSFTLKAHDKAVSSISYSPSIRNLLATGSTDKMVKLWDLSNDQ 1242
             GFD R A+S  S   KPSFTL AHDKAV +ISY+P   NLLATGSTDKMVKLWDLSN+Q
Sbjct: 374  QGFDIRAAKSGSSSDLKPSFTLHAHDKAVCTISYNPLAPNLLATGSTDKMVKLWDLSNNQ 433

Query: 1243 PSCVASKNPKAGAVFSISFSKDSPYLLAVGGSKGNLEVWDT-SDAWISRKHG 1395
            PSC+ SKNPKAGA+FS+SFS+D+P+LLA+GGSKG LE+WDT S+A ++R+ G
Sbjct: 434  PSCLVSKNPKAGAIFSVSFSEDNPFLLAIGGSKGTLELWDTLSEAEVARRFG 485


>ref|XP_004165621.1| PREDICTED: uncharacterized WD repeat-containing protein
            C17D11.16-like [Cucumis sativus]
          Length = 492

 Score =  582 bits (1501), Expect = e-164
 Identities = 301/478 (62%), Positives = 355/478 (74%), Gaps = 8/478 (1%)
 Frame = +1

Query: 1    AEPPSKEEIEMLIKSG--ILDGSGDGEIERDDEDMDVEYVKEADEVAQALLVANALEKSS 174
            A+PPS+E I+ L+KS   + D S   + E D+EDMDVE     DE+A AL VA AL KSS
Sbjct: 20   ADPPSQETIDQLLKSNQVVEDSSKHSDDEADEEDMDVEDAN--DEIANALAVAQALGKSS 77

Query: 175  KTIK-GTNFQDIEDGLRXXXXXXXXXXXXXXXXLFSKGLGTTYYPSNDVDPYLKDKDGND 351
            +T    T + DI + L+                LF+ G G  YYPSND+DPYL+DKDG+D
Sbjct: 78   ETRNLETKYDDIAEELKELDMDNYDNEDDEIE-LFTSGAGDVYYPSNDMDPYLQDKDGDD 136

Query: 352  SEDLEDMIIKAEDSVIICACNEDDVSHLEIWILEDILEGDRNMFIHHDIMLPAFPLCMAW 531
            SED+ED  IK  D+VIICAC+ED+VS L++WI E    GD N +IH DI++PAFPLC AW
Sbjct: 137  SEDIEDETIKPTDAVIICACSEDNVSALQVWICEGYGAGDPNFYIHRDIIIPAFPLCTAW 196

Query: 532  LDCPIKGGEKGNFIAVGSMEPAIEIWDLDIMDEVQPSQVLGGIAEXXXXXXXGTQRSIKY 711
            LDCP+KGGE+GNFIAVGSMEP+IEIWDLD++DEVQP  VLGGI E       G + S+ Y
Sbjct: 197  LDCPLKGGERGNFIAVGSMEPSIEIWDLDVIDEVQPCAVLGGIVEKKKKKKKGKKTSVTY 256

Query: 712  KKGSHTDSVLGLAWNN--RNLLASASADNLVKIWDVATGECNITMEHHTDKVQAVAWEQS 885
            K+ SHTDSVLGLAWN   RN+LASASAD  VKIWDV+TG+CNITM+HH DKVQAVAW   
Sbjct: 257  KENSHTDSVLGLAWNKEFRNILASASADKQVKIWDVSTGQCNITMQHHIDKVQAVAWNH- 315

Query: 886  TADKSPNILLSGSFDHSVVMKDVRTPEHTKIKWSVNADVESLAWDPHTEHSFVVSLENGI 1065
                S  +LLSGSFDHSVV+KD R P H+  KW V ADVE+LAWDPHTEH FVVSLE+G 
Sbjct: 316  ---HSSQVLLSGSFDHSVVLKDGRNPSHSGYKWQVTADVENLAWDPHTEHMFVVSLEDGT 372

Query: 1066 VAGFDTRGA--ESSPSPKPSFTLKAHDKAVSSISYSPSIRNLLATGSTDKMVKLWDLSND 1239
            V GFD R A  ESS   K SFTL AH+KAV S+SYSPS  NLLATGSTDKMVKLWDLSN+
Sbjct: 373  VKGFDIRNATTESSSESKASFTLHAHEKAVCSVSYSPSAPNLLATGSTDKMVKLWDLSNN 432

Query: 1240 QPSCVASKNPKAGAVFSISFSKDSPYLLAVGGSKGNLEVWDT-SDAWISRKHGKQCNQ 1410
            +PSC+AS NPKAGAVFS+SFS+D P+LLA+GGSKG LEVWDT +DA +SRK+G    Q
Sbjct: 433  EPSCLASTNPKAGAVFSVSFSEDCPFLLAIGGSKGKLEVWDTLTDAAVSRKYGNYSQQ 490


Top