BLASTX nr result

ID: Bupleurum21_contig00019837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019837
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316285.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
emb|CBI31687.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258...   114   2e-23
ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804...   112   6e-23
ref|XP_002533150.1| serine/arginine rich splicing factor, putati...   105   7e-21

>ref|XP_002316285.1| predicted protein [Populus trichocarpa] gi|222865325|gb|EEF02456.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  117 bits (292), Expect = 3e-24
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   QLFAGREISVVVASETRKRPEDMRRRTRTGGPSGYEGQXXXXXXXXXXXXXXXXXXXXXX 182
           Q+FAGR+ISVV+A+ETRKRPE+MR R R  GPS + G+                      
Sbjct: 70  QIFAGRQISVVLAAETRKRPEEMRHRARVRGPSSHGGRSSNYGRSRSRSLSRSPRHYPSS 129

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXKGPRSPRDPPPEGDGRHARRSYSPGNGN-DAAE 359
                                        P SPR PPPE DG H+RRSYSP  G+ D   
Sbjct: 130 RSRYRSRSYSPAPRRRDYSASPDRRHAGHPGSPRGPPPERDGDHSRRSYSPAYGHGDGLN 189

Query: 360 RNDKEYADRPAYESDGAGKHWKSSPGRAIRSPSGSRSRSADISP 491
            N   + ++ AY+ + A + W+ SPGRA RSPSGSRSRSAD+SP
Sbjct: 190 ENGNGFGEKSAYDFEEA-RAWRPSPGRASRSPSGSRSRSADLSP 232


>emb|CBI31687.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  114 bits (284), Expect = 2e-23
 Identities = 76/174 (43%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
 Frame = +3

Query: 3   QLFAGREISVVVASETRKRPEDMRRRTRTGGPSGYEGQXXXXXXXXXXXXXXXXXXXXXX 182
           Q+FAGREISVVVA+ETRKRPE+MR R R  GPS Y G+                      
Sbjct: 181 QIFAGREISVVVAAETRKRPEEMRTRARVRGPSSYGGRRSSYYGGSRSRSVSRSRSPPRL 240

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXKG---PRSPRDPPPEGDGRHARRSYSPGNGNDA 353
                                      +    PRSPRD PPE DG H RRSYSPG  +DA
Sbjct: 241 LSGSRRYRSRSYSPVPRRRGDYSVSPRRRVEHPRSPRDHPPERDGDHIRRSYSPGY-DDA 299

Query: 354 AERN---DKEYADRPAYESDGAGKHWKSSPGRAI-RSPSGSRSRSADISPRRSR 503
           A++N      Y ++ AYE D A    +S P R + RS SGSRSRSAD+SPR SR
Sbjct: 300 ADQNHHTGNGYLEKSAYEPDEARDRRRSPPPRRVSRSLSGSRSRSADVSPRHSR 353


>ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
          Length = 276

 Score =  114 bits (284), Expect = 2e-23
 Identities = 76/174 (43%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
 Frame = +3

Query: 3   QLFAGREISVVVASETRKRPEDMRRRTRTGGPSGYEGQXXXXXXXXXXXXXXXXXXXXXX 182
           Q+FAGREISVVVA+ETRKRPE+MR R R  GPS Y G+                      
Sbjct: 104 QIFAGREISVVVAAETRKRPEEMRTRARVRGPSSYGGRRSSYYGGSRSRSVSRSRSPPRL 163

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXKG---PRSPRDPPPEGDGRHARRSYSPGNGNDA 353
                                      +    PRSPRD PPE DG H RRSYSPG  +DA
Sbjct: 164 LSGSRRYRSRSYSPVPRRRGDYSVSPRRRVEHPRSPRDHPPERDGDHIRRSYSPGY-DDA 222

Query: 354 AERN---DKEYADRPAYESDGAGKHWKSSPGRAI-RSPSGSRSRSADISPRRSR 503
           A++N      Y ++ AYE D A    +S P R + RS SGSRSRSAD+SPR SR
Sbjct: 223 ADQNHHTGNGYLEKSAYEPDEARDRRRSPPPRRVSRSLSGSRSRSADVSPRHSR 276


>ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
          Length = 276

 Score =  112 bits (281), Expect = 6e-23
 Identities = 72/171 (42%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
 Frame = +3

Query: 3   QLFAGREISVVVASETRKRPEDMRRRT-RTGGPSGYEGQXXXXXXXXXXXXXXXXXXXXX 179
           Q+FAGREISVVVA ETRKRPE+MR RT R  GP+GY GQ                     
Sbjct: 111 QIFAGREISVVVAEETRKRPEEMRHRTSRLRGPAGYGGQRSSRYGRSRSRSVTRSRSPPY 170

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKG---PRSPRDPPPEGDGRHARRSYSPGNGND 350
                                       +    PRSPR PP E DG   RRSYSP  GN 
Sbjct: 171 HSGSRNRYRSRSYSPAPRRQSDYSVSPRRQAEHPRSPRGPPRERDGEQKRRSYSPAYGNG 230

Query: 351 AAERNDKEYADRPAYESDGAGKHWKSSPGRAIRSPSGSRSRSADISPRRSR 503
             +     YA++  Y+SD     WKSS     RSP GSRSRSA++SPRR R
Sbjct: 231 IEQNQSNGYAEKSMYKSDADRGQWKSS-----RSPPGSRSRSAELSPRRGR 276


>ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223527045|gb|EEF29231.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 265

 Score =  105 bits (263), Expect = 7e-21
 Identities = 67/167 (40%), Positives = 81/167 (48%)
 Frame = +3

Query: 3   QLFAGREISVVVASETRKRPEDMRRRTRTGGPSGYEGQXXXXXXXXXXXXXXXXXXXXXX 182
           Q+FAGREISVVVA+ETRKRPE+MR+R+R G PSGY G+                      
Sbjct: 107 QIFAGREISVVVAAETRKRPEEMRQRSRIGRPSGYGGRSSYYGRSRSRSLSHSPRHHLGS 166

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXKGPRSPRDPPPEGDGRHARRSYSPGNGNDAAER 362
                                         RSP   PP  DG H  RSYSPG   D  + 
Sbjct: 167 RSRYRSRSFSPAPRRRDYSASPGRRHADHARSPSGLPPGRDGDHIHRSYSPGYRPDGPDG 226

Query: 363 NDKEYADRPAYESDGAGKHWKSSPGRAIRSPSGSRSRSADISPRRSR 503
               Y ++PAY+ + A + W+        SPSGSRSRSAD+SPRRSR
Sbjct: 227 YGPGYGEKPAYDPEEA-RAWRP-------SPSGSRSRSADLSPRRSR 265


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