BLASTX nr result

ID: Bupleurum21_contig00019782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019782
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]    95   3e-18
ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Viti...    95   3e-18
ref|XP_002510047.1| DNA binding protein, putative [Ricinus commu...    89   7e-16
ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|2...    79   7e-13
gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]        74   2e-11

>emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
          Length = 484

 Score = 95.1 bits (235), Expect(2) = 3e-18
 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
 Frame = -3

Query: 239 NHTENFG-----VHNGFSGPTYPVTMEDQGISSTSHLVQYQSDSGLGEMVPKLSCFGSGS 75
           +  ENFG      H+ F+   YPV +E+QGI ST HLV Y S+S L EMVPKL CFGSGS
Sbjct: 67  SQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNSSLVEMVPKLPCFGSGS 126

Query: 74  FSEMVNSFGLPDCGQMSYS 18
           FSEMV SFGLP+CGQ + S
Sbjct: 127 FSEMVASFGLPECGQTANS 145



 Score = 22.3 bits (46), Expect(2) = 3e-18
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 354 KVTEMEMGSASMFK 313
           KVT M M SASM+K
Sbjct: 34  KVTGMTMSSASMYK 47


>ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
           gi|302142156|emb|CBI19359.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 95.1 bits (235), Expect(2) = 3e-18
 Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
 Frame = -3

Query: 239 NHTENFG-----VHNGFSGPTYPVTMEDQGISSTSHLVQYQSDSGLGEMVPKLSCFGSGS 75
           +  ENFG      H+ F+   YPV +E+QGI ST HLV Y S+S L EMVPKL CFGSGS
Sbjct: 67  SQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNSSLVEMVPKLPCFGSGS 126

Query: 74  FSEMVNSFGLPDCGQMSYS 18
           FSEMV SFGLP+CGQ + S
Sbjct: 127 FSEMVASFGLPECGQTANS 145



 Score = 22.3 bits (46), Expect(2) = 3e-18
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 354 KVTEMEMGSASMFK 313
           KVT M M SASM+K
Sbjct: 34  KVTGMTMSSASMYK 47


>ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
           gi|223550748|gb|EEF52234.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 408

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
 Frame = -3

Query: 239 NHTENFGV----HNGFSGPTYPVTMEDQGISSTSHLVQYQSDSGLGEMVPKLSCFGSGSF 72
           N  ENFG      + F+   Y + ME+QGI+S+SHLV YQSDS   E+VPK   +GSGSF
Sbjct: 45  NQHENFGASMVSQSEFTNSHYAIVMENQGINSSSHLVHYQSDSSYVELVPKFPSYGSGSF 104

Query: 71  SEMVNSFGLPDCGQMSYS 18
           SEMV+SFGL DCGQ+S S
Sbjct: 105 SEMVSSFGLTDCGQISNS 122


>ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|222855954|gb|EEE93501.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 37/65 (56%), Positives = 46/65 (70%)
 Frame = -3

Query: 221 GVHNGFSGPTYPVTMEDQGISSTSHLVQYQSDSGLGEMVPKLSCFGSGSFSEMVNSFGLP 42
           G  + FS   +P+ ME+ GIS+T HLV Y SDSG  E+VPK   FGSG+FSEMV S GL 
Sbjct: 56  GSQSEFSNSPFPIVMENPGISNTCHLVHYPSDSGFVELVPKFPGFGSGNFSEMVGSVGLT 115

Query: 41  DCGQM 27
           +CGQ+
Sbjct: 116 ECGQI 120


>gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
          Length = 400

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
 Frame = -3

Query: 227 NFG-----VHNGFSGPTYPVTMEDQGISSTSHLVQYQSDSGLGEMVPKLSCFGSGSFSEM 63
           NFG     + N F+ P YPV +E+Q + S+SHLV + SDSGL  MVPK+  FGSGSFSE+
Sbjct: 68  NFGNSSMVLQNEFANPNYPVLLENQTMGSSSHLVHFPSDSGLVGMVPKIPSFGSGSFSEI 127

Query: 62  VNSFG 48
           V+SFG
Sbjct: 128 VSSFG 132


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