BLASTX nr result

ID: Bupleurum21_contig00019774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019774
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ...   154   2e-35
ref|XP_003529780.1| PREDICTED: probable cyclic nucleotide-gated ...   152   7e-35
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   151   2e-34
emb|CBI35308.3| unnamed protein product [Vitis vinifera]              151   2e-34
emb|CAN68349.1| hypothetical protein VITISV_032026 [Vitis vinifera]   151   2e-34

>ref|XP_003534111.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 770

 Score =  154 bits (389), Expect = 2e-35
 Identities = 78/148 (52%), Positives = 102/148 (68%), Gaps = 1/148 (0%)
 Frame = +3

Query: 291 EKDEIPMLWSTYMQM-DETDKPQSRRPSTRMRSASISIPMDSLDSSDVQNKYIGHTGPLR 467
           EKDE+PML  T+ Q+ DE      RR  +R +SASISIPM SL+S + +   +GHTGPLR
Sbjct: 5   EKDEVPMLSETHAQLSDEVVDSNFRRLVSRTQSASISIPMASLESYEKETSLVGHTGPLR 64

Query: 468 SERKIPYMQMSGPLYANRGIEKKNQPIEGATGSRTAEATLEKYPSINLVGQNDWPDRNHV 647
           S RK P++QMSGPLYA  G    ++    AT ++  E+  EK+ + N   +N W D ++ 
Sbjct: 65  SVRKTPFVQMSGPLYATNGTGNLSRQNIVATRTKVVESKTEKFSTFNGTDENHW-DNDYN 123

Query: 648 TKNEHLLRSGQLGMCSDPYCTTCPTYFE 731
            KNEHL+RSGQLGMC+DPYCTTCPTYF+
Sbjct: 124 RKNEHLMRSGQLGMCNDPYCTTCPTYFK 151


>ref|XP_003529780.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 217

 Score =  152 bits (384), Expect = 7e-35
 Identities = 78/148 (52%), Positives = 101/148 (68%), Gaps = 1/148 (0%)
 Frame = +3

Query: 291 EKDEIPMLWSTYMQM-DETDKPQSRRPSTRMRSASISIPMDSLDSSDVQNKYIGHTGPLR 467
           EKDE+PML  T+ Q+ DE      RR  +R RSASISIPM SL+S + +   +GHTGPL 
Sbjct: 5   EKDEVPMLSETHAQLSDEVVDSSFRRLVSRTRSASISIPMASLESYEKETSLVGHTGPLC 64

Query: 468 SERKIPYMQMSGPLYANRGIEKKNQPIEGATGSRTAEATLEKYPSINLVGQNDWPDRNHV 647
           S RK P++QMSGPLYA  G    ++    AT ++  E+  EK+ + N   +N W D ++ 
Sbjct: 65  SVRKTPFVQMSGPLYATNGTGNLSRQNIVATRTKVVESKTEKFSTFNGTDENRW-DNDYN 123

Query: 648 TKNEHLLRSGQLGMCSDPYCTTCPTYFE 731
            KNEHL+RSGQLGMC+DPYCTTCPTYF+
Sbjct: 124 RKNEHLMRSGQLGMCNDPYCTTCPTYFK 151


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  151 bits (381), Expect = 2e-34
 Identities = 79/161 (49%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
 Frame = +3

Query: 279 MDASEKDEIPMLWSTYMQ-MDETDKPQSRRPSTRMRSASISIPMDSLDSSDVQNKYIGHT 455
           M   EKDE PML   Y Q +D+     S R ++R RSAS SIPM+S++S   ++  + HT
Sbjct: 1   MSDLEKDETPMLSDAYSQYLDKPRVSHSDRLTSRNRSASSSIPMNSMESYQTESNLVNHT 60

Query: 456 GPLRSERKIPYMQMSGPLYANRGIEKKNQPIEGATGSRTAEATLEKYPSINLVGQNDWPD 635
           GPLR+E+K P++ MSGPL  + G      P  G  G R AE   EK+PS N +  N+WP 
Sbjct: 61  GPLRNEKKTPFIPMSGPLLKSEGFFP---PTPGVRGHRKAEPRAEKFPSFNGMEWNNWPH 117

Query: 636 RNHVTKNEHLLRSGQLGMCSDPYCTTCPTYF--EWQRKNMK 752
            N+  KNEHLLRSGQLG+C+DPYCT CPT+F    Q++N K
Sbjct: 118 NNYAGKNEHLLRSGQLGVCNDPYCTICPTHFIDSRQQRNSK 158


>emb|CBI35308.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score =  151 bits (381), Expect = 2e-34
 Identities = 79/161 (49%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
 Frame = +3

Query: 279 MDASEKDEIPMLWSTYMQ-MDETDKPQSRRPSTRMRSASISIPMDSLDSSDVQNKYIGHT 455
           M   EKDE PML   Y Q +D+     S R ++R RSAS SIPM+S++S   ++  + HT
Sbjct: 10  MSDLEKDETPMLSDAYSQYLDKPRVSHSDRLTSRNRSASSSIPMNSMESYQTESNLVNHT 69

Query: 456 GPLRSERKIPYMQMSGPLYANRGIEKKNQPIEGATGSRTAEATLEKYPSINLVGQNDWPD 635
           GPLR+E+K P++ MSGPL  + G      P  G  G R AE   EK+PS N +  N+WP 
Sbjct: 70  GPLRNEKKTPFIPMSGPLLKSEGFFP---PTPGVRGHRKAEPRAEKFPSFNGMEWNNWPH 126

Query: 636 RNHVTKNEHLLRSGQLGMCSDPYCTTCPTYF--EWQRKNMK 752
            N+  KNEHLLRSGQLG+C+DPYCT CPT+F    Q++N K
Sbjct: 127 NNYAGKNEHLLRSGQLGVCNDPYCTICPTHFIDSRQQRNSK 167


>emb|CAN68349.1| hypothetical protein VITISV_032026 [Vitis vinifera]
          Length = 261

 Score =  151 bits (381), Expect = 2e-34
 Identities = 79/161 (49%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
 Frame = +3

Query: 279 MDASEKDEIPMLWSTYMQ-MDETDKPQSRRPSTRMRSASISIPMDSLDSSDVQNKYIGHT 455
           M   EKDE PML   Y Q +D+     S R ++R RSAS SIPM+S++S   ++  + HT
Sbjct: 60  MSDLEKDETPMLSDAYSQYLDKPRVSHSDRLTSRNRSASSSIPMNSMESYQTESNLVNHT 119

Query: 456 GPLRSERKIPYMQMSGPLYANRGIEKKNQPIEGATGSRTAEATLEKYPSINLVGQNDWPD 635
           GPLR+E+K P++ MSGPL  + G      P  G  G R AE   EK+PS N +  N+WP 
Sbjct: 120 GPLRNEKKTPFIPMSGPLLKSEGFFP---PTPGVRGHRKAEPRAEKFPSFNGMEWNNWPH 176

Query: 636 RNHVTKNEHLLRSGQLGMCSDPYCTTCPTYF--EWQRKNMK 752
            N+  KNEHLLRSGQLG+C+DPYCT CPT+F    Q++N K
Sbjct: 177 NNYAGKNEHLLRSGQLGVCNDPYCTICPTHFIDSRQQRNSK 217


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