BLASTX nr result

ID: Bupleurum21_contig00019741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019741
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX79380.1| actin-depolymerizing factor [Gossypium barbadense]      60   3e-07
gb|ABD66504.1| actin depolymerizing factor 8 [Gossypium hirsutum...    60   3e-07
ref|XP_002311154.1| actin depolymerizing factor 4 [Populus trich...    60   4e-07
ref|NP_190187.1| actin depolymerizing factor 1 [Arabidopsis thal...    59   1e-06
ref|XP_002877449.1| hypothetical protein ARALYDRAFT_484981 [Arab...    59   1e-06

>gb|ABX79380.1| actin-depolymerizing factor [Gossypium barbadense]
          Length = 139

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +1

Query: 406 SSKDRFKRELDRIQVELQATDPNEMDIEVIRSR 504
           SSKDRFKRELD IQVELQATDP+EMD++VIRSR
Sbjct: 105 SSKDRFKRELDGIQVELQATDPSEMDLDVIRSR 137


>gb|ABD66504.1| actin depolymerizing factor 8 [Gossypium hirsutum]
           gi|119388970|gb|AAY88048.2| actin depolymerizing factor
           [Gossypium hirsutum]
          Length = 139

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +1

Query: 406 SSKDRFKRELDRIQVELQATDPNEMDIEVIRSR 504
           SSKDRFKRELD IQVELQATDP+EMD++VIRSR
Sbjct: 105 SSKDRFKRELDGIQVELQATDPSEMDLDVIRSR 137


>ref|XP_002311154.1| actin depolymerizing factor 4 [Populus trichocarpa]
           gi|118485497|gb|ABK94603.1| unknown [Populus
           trichocarpa] gi|222850974|gb|EEE88521.1| actin
           depolymerizing factor 4 [Populus trichocarpa]
          Length = 139

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +1

Query: 406 SSKDRFKRELDRIQVELQATDPNEMDIEVIRSRNY 510
           SSKDRFKRELD IQ+ELQATDP EM ++VIRSR+Y
Sbjct: 105 SSKDRFKRELDGIQIELQATDPTEMGLDVIRSRSY 139


>ref|NP_190187.1| actin depolymerizing factor 1 [Arabidopsis thaliana]
           gi|17366511|sp|Q39250.1|ADF1_ARATH RecName:
           Full=Actin-depolymerizing factor 1; Short=ADF-1;
           Short=AtADF1 gi|11513711|pdb|1F7S|A Chain A, Crystal
           Structure Of Adf1 From Arabidopsis Thaliana
           gi|1408471|gb|AAB03696.1| actin depolymerizing factor 1
           [Arabidopsis thaliana] gi|3851707|gb|AAC72407.1| actin
           depolymerizing factor 1 [Arabidopsis thaliana]
           gi|7630029|emb|CAB88325.1| actin depolymerizing factor 1
           (ADF1) [Arabidopsis thaliana] gi|14334962|gb|AAK59658.1|
           putative actin depolymerizing factor ADF1 [Arabidopsis
           thaliana] gi|17065584|gb|AAL33770.1| putative actin
           depolymerizing factor 1 [Arabidopsis thaliana]
           gi|21553985|gb|AAM63066.1| actin-depolymerizing factor
           ADF-1 (AtADF1) [Arabidopsis thaliana]
           gi|195604826|gb|ACG24243.1| hypothetical protein [Zea
           mays] gi|332644579|gb|AEE78100.1| actin depolymerizing
           factor 1 [Arabidopsis thaliana]
          Length = 139

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 406 SSKDRFKRELDRIQVELQATDPNEMDIEVIRSR 504
           SSKDRFKRELD IQVELQATDP EMD++V RSR
Sbjct: 105 SSKDRFKRELDGIQVELQATDPTEMDLDVFRSR 137


>ref|XP_002877449.1| hypothetical protein ARALYDRAFT_484981 [Arabidopsis lyrata subsp.
           lyrata] gi|297323287|gb|EFH53708.1| hypothetical protein
           ARALYDRAFT_484981 [Arabidopsis lyrata subsp. lyrata]
          Length = 128

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 406 SSKDRFKRELDRIQVELQATDPNEMDIEVIRSR 504
           SSKDRFKRELD IQVELQATDP EMD++V RSR
Sbjct: 94  SSKDRFKRELDGIQVELQATDPTEMDLDVFRSR 126


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