BLASTX nr result

ID: Bupleurum21_contig00019724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019724
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528442.1| conserved hypothetical protein [Ricinus comm...   417   e-114
ref|XP_002298283.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|NP_565600.1| binding protein [Arabidopsis thaliana] gi|18650...   400   e-109
gb|ABK28514.1| unknown [Arabidopsis thaliana]                         400   e-109
ref|XP_004139315.1| PREDICTED: uncharacterized protein LOC101222...   399   e-109

>ref|XP_002528442.1| conserved hypothetical protein [Ricinus communis]
            gi|223532118|gb|EEF33925.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 253

 Score =  417 bits (1073), Expect = e-114
 Identities = 201/248 (81%), Positives = 226/248 (91%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1123 QRGMHSRNKKAMELIAKGWSALKEVDRVIDYCELNDKRLIPLLRTAKENFELALETDNSN 944
            +R MHSRNKKAME IAKGWSALKEVDRVIDYCELND RLIPLLRTAKENFELALE DNSN
Sbjct: 3    KREMHSRNKKAMEFIAKGWSALKEVDRVIDYCELNDSRLIPLLRTAKENFELALEADNSN 62

Query: 943  THARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPDAQYELACRLRVENDYVQSDQQA 764
            THARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDP+AQYEL CRLRVENDYVQSDQQA
Sbjct: 63   THARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPEAQYELGCRLRVENDYVQSDQQA 122

Query: 763  FHYLEMAVDQLHPAALYMLGAVYLTGDCVKKDVSSAMWCFHRASQKGHAGAAIAYGSLLL 584
            F+YLE AVDQLHP ALY+LGAVYLTGDCVK+D +SA+WCFHRAS+KGHAGAA+AYGSLLL
Sbjct: 123  FYYLEKAVDQLHPGALYLLGAVYLTGDCVKQDFASALWCFHRASEKGHAGAAVAYGSLLL 182

Query: 583  RGAQVPESITKFSVKRDSSSRTLR--KNSAQNPLEMAREQFEIAAKAKCELGFRWLKRLD 410
            RGAQVPES+ KF +KR SS++  +  + +  NP+E+A+EQF+IAAKA C+LG +WL+R++
Sbjct: 183  RGAQVPESLMKFKLKRSSSAKKAKDAEIAEMNPVELAKEQFQIAAKAGCDLGLKWLQRIE 242

Query: 409  EEEKRLTN 386
            EEE RL N
Sbjct: 243  EEETRLLN 250


>ref|XP_002298283.1| predicted protein [Populus trichocarpa] gi|222845541|gb|EEE83088.1|
            predicted protein [Populus trichocarpa]
          Length = 261

 Score =  405 bits (1041), Expect = e-110
 Identities = 194/248 (78%), Positives = 222/248 (89%), Gaps = 2/248 (0%)
 Frame = -3

Query: 1129 NWQRGMHSRNKKAMELIAKGWSALKEVDRVIDYCELNDKRLIPLLRTAKENFELALETDN 950
            NWQR +H RNKKAME IAKGWSALKEVDRVIDYCE NDKRLIPLLRTAKENF+LALE DN
Sbjct: 1    NWQREIHGRNKKAMEFIAKGWSALKEVDRVIDYCERNDKRLIPLLRTAKENFQLALEVDN 60

Query: 949  SNTHARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPDAQYELACRLRVENDYVQSDQ 770
            SNTHAR+WLSKLHLKYHVPG   AIG ALLVEAA+MGDP+AQYEL CRLRVENDYVQSDQ
Sbjct: 61   SNTHARYWLSKLHLKYHVPGQNHAIGVALLVEAANMGDPEAQYELGCRLRVENDYVQSDQ 120

Query: 769  QAFHYLEMAVDQLHPAALYMLGAVYLTGDCVKKDVSSAMWCFHRASQKGHAGAAIAYGSL 590
            QAF+Y+E AV++LHP ALY+LGAVYLTGDCVKKD++SA+WCFHRAS+KGH GAAIAYGSL
Sbjct: 121  QAFYYIEKAVEKLHPGALYLLGAVYLTGDCVKKDIASALWCFHRASEKGHVGAAIAYGSL 180

Query: 589  LLRGAQVPESITKFSVKRDSSSRTLR--KNSAQNPLEMAREQFEIAAKAKCELGFRWLKR 416
            LLRGAQVPE +TKFS+KR SS++ +   +N+  NP+E A+EQF+IAAKA  +LG +WL+R
Sbjct: 181  LLRGAQVPEHLTKFSLKRGSSAKKMNSAENTEMNPVERAKEQFQIAAKAGSDLGLKWLQR 240

Query: 415  LDEEEKRL 392
            L+EEE RL
Sbjct: 241  LEEEENRL 248


>ref|NP_565600.1| binding protein [Arabidopsis thaliana]
            gi|186502978|ref|NP_001118384.1| binding protein
            [Arabidopsis thaliana] gi|4874298|gb|AAD31360.1|
            expressed protein [Arabidopsis thaliana]
            gi|20197749|gb|AAM15230.1| expressed protein [Arabidopsis
            thaliana] gi|51971683|dbj|BAD44506.1| unknown protein
            [Arabidopsis thaliana] gi|91806270|gb|ABE65863.1| unknown
            [Arabidopsis thaliana] gi|94442439|gb|ABF19007.1|
            At2g25570 [Arabidopsis thaliana]
            gi|330252623|gb|AEC07717.1| binding protein [Arabidopsis
            thaliana] gi|330252625|gb|AEC07719.1| binding protein
            [Arabidopsis thaliana]
          Length = 288

 Score =  400 bits (1028), Expect = e-109
 Identities = 195/263 (74%), Positives = 225/263 (85%), Gaps = 3/263 (1%)
 Frame = -3

Query: 1171 SKATSKHGLHLSQYNWQRGMHSRNKKAMELIAKGWSALKEVDRVIDYCELNDKRLIPLLR 992
            SK    H +H   +  +RG+HSRN+KAME +AKGWSA+KEV+RVIDYCELND+RLIPLLR
Sbjct: 17   SKIACHHTVH--GFEQRRGLHSRNEKAMEYVAKGWSAIKEVERVIDYCELNDRRLIPLLR 74

Query: 991  TAKENFELALETDNSNTHARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPDAQYELA 812
             AKENFELALE DN NTHAR+WLSKLHLKYHVPGACKA+GAALLVEAADMG+ DAQYEL 
Sbjct: 75   GAKENFELALEADNLNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELG 134

Query: 811  CRLRVENDYVQSDQQAFHYLEMAVDQLHPAALYMLGAVYLTGDCVKKDVSSAMWCFHRAS 632
            CRLRVEND+VQSDQQAFHY+E AVDQLHP ALY+LG VYLTGDCVK+DV SA+WCFHRAS
Sbjct: 135  CRLRVENDHVQSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRAS 194

Query: 631  QKGHAGAAIAYGSLLLRGAQVPESITKFSVKRDSSSRTLRK---NSAQNPLEMAREQFEI 461
            +KGHAGAAIAYGSLLLRG QVPES+TK +V   S  +  RK   N   NPLEMA+EQF+I
Sbjct: 195  EKGHAGAAIAYGSLLLRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQI 254

Query: 460  AAKAKCELGFRWLKRLDEEEKRL 392
            AA+A C+LG +WL+R+++EEK L
Sbjct: 255  AARAGCDLGLKWLQRVEQEEKLL 277


>gb|ABK28514.1| unknown [Arabidopsis thaliana]
          Length = 289

 Score =  400 bits (1028), Expect = e-109
 Identities = 195/263 (74%), Positives = 225/263 (85%), Gaps = 3/263 (1%)
 Frame = -3

Query: 1171 SKATSKHGLHLSQYNWQRGMHSRNKKAMELIAKGWSALKEVDRVIDYCELNDKRLIPLLR 992
            SK    H +H   +  +RG+HSRN+KAME +AKGWSA+KEV+RVIDYCELND+RLIPLLR
Sbjct: 17   SKIACHHTVH--GFEQRRGLHSRNEKAMEYVAKGWSAIKEVERVIDYCELNDRRLIPLLR 74

Query: 991  TAKENFELALETDNSNTHARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPDAQYELA 812
             AKENFELALE DN NTHAR+WLSKLHLKYHVPGACKA+GAALLVEAADMG+ DAQYEL 
Sbjct: 75   GAKENFELALEADNLNTHARYWLSKLHLKYHVPGACKAVGAALLVEAADMGNADAQYELG 134

Query: 811  CRLRVENDYVQSDQQAFHYLEMAVDQLHPAALYMLGAVYLTGDCVKKDVSSAMWCFHRAS 632
            CRLRVEND+VQSDQQAFHY+E AVDQLHP ALY+LG VYLTGDCVK+DV SA+WCFHRAS
Sbjct: 135  CRLRVENDHVQSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRAS 194

Query: 631  QKGHAGAAIAYGSLLLRGAQVPESITKFSVKRDSSSRTLRK---NSAQNPLEMAREQFEI 461
            +KGHAGAAIAYGSLLLRG QVPES+TK +V   S  +  RK   N   NPLEMA+EQF+I
Sbjct: 195  EKGHAGAAIAYGSLLLRGVQVPESLTKLNVVGVSPPKRARKNLENPEMNPLEMAKEQFQI 254

Query: 460  AAKAKCELGFRWLKRLDEEEKRL 392
            AA+A C+LG +WL+R+++EEK L
Sbjct: 255  AARAGCDLGLKWLQRVEQEEKLL 277


>ref|XP_004139315.1| PREDICTED: uncharacterized protein LOC101222228 [Cucumis sativus]
            gi|449493614|ref|XP_004159376.1| PREDICTED:
            uncharacterized LOC101222228 [Cucumis sativus]
          Length = 276

 Score =  399 bits (1025), Expect = e-109
 Identities = 192/254 (75%), Positives = 223/254 (87%), Gaps = 3/254 (1%)
 Frame = -3

Query: 1141 LSQYNWQRGMHSRNKKAMELIAKGWSALKEVDRVIDYCELNDKRLIPLLRTAKENFELAL 962
            L +++  R +HSRN+KAME IAKGW+ALKEVDRVIDYCELND+RLIP LRTAKENFELAL
Sbjct: 19   LLRFSQHRELHSRNRKAMEFIAKGWNALKEVDRVIDYCELNDRRLIPHLRTAKENFELAL 78

Query: 961  ETDNSNTHARFWLSKLHLKYHVPGACKAIGAALLVEAADMGDPDAQYELACRLRVENDYV 782
            E DNSNTHAR+WLS+LHLKYHVPGACKA+GAALLVEAA+MGD DAQYEL CRLRVEN YV
Sbjct: 79   EVDNSNTHARYWLSRLHLKYHVPGACKAVGAALLVEAAEMGDADAQYELGCRLRVENKYV 138

Query: 781  QSDQQAFHYLEMAVDQLHPAALYMLGAVYLTGDCVKKDVSSAMWCFHRASQKGHAGAAIA 602
            QSDQQAF++LE AVDQLHP AL++LGAVYLTGDCVKKD++SA+WCFHRAS+KGHAGAAIA
Sbjct: 139  QSDQQAFYFLEKAVDQLHPGALFLLGAVYLTGDCVKKDIASALWCFHRASEKGHAGAAIA 198

Query: 601  YGSLLLRGAQVPESITKFSVKRDSSSRTLRKN---SAQNPLEMAREQFEIAAKAKCELGF 431
            YGSLLL+G +VPES+TKFS+K  S +R  RKN   S  + +EMAREQF  AA + C+LG 
Sbjct: 199  YGSLLLKGVEVPESLTKFSLKNGSPTRKARKNPDASMMSSIEMAREQFNAAAISGCDLGL 258

Query: 430  RWLKRLDEEEKRLT 389
            +WL RL+EEEK L+
Sbjct: 259  KWLNRLEEEEKSLS 272


Top