BLASTX nr result

ID: Bupleurum21_contig00019706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019706
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522602.1| ring finger protein, putative [Ricinus commu...   187   6e-46
emb|CBI34030.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...   185   4e-45
gb|AFK33981.1| unknown [Lotus japonicus]                              179   3e-43
ref|XP_003541479.1| PREDICTED: putative RING-H2 finger protein A...   177   8e-43

>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
           gi|223538078|gb|EEF39689.1| ring finger protein,
           putative [Ricinus communis]
          Length = 378

 Score =  187 bits (476), Expect = 6e-46
 Identities = 79/96 (82%), Positives = 93/96 (96%)
 Frame = -1

Query: 288 THQDFLDEDHGFVLDHPIWYIRTIGLQPSVISAITICKYKKGEGLVEGTECSVCLSEFQE 109
           TH++FLDEDHG +LDHP+WYI TIGLQPSVI++I++CKYK+G+GLVEGT+CSVCL+EF+E
Sbjct: 106 THEEFLDEDHGPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEE 165

Query: 108 DETLRLLPKCNHAFHIPCIDTWLRSHTNCPLCRAGI 1
           DETLRLLPKC+HAFHIPCIDTWLRSHTNCPLCRA I
Sbjct: 166 DETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPI 201


>emb|CBI34030.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  185 bits (470), Expect = 3e-45
 Identities = 80/96 (83%), Positives = 90/96 (93%)
 Frame = -1

Query: 288 THQDFLDEDHGFVLDHPIWYIRTIGLQPSVISAITICKYKKGEGLVEGTECSVCLSEFQE 109
           +H DF+DED   V+DHPIWYIRT+GLQPSVISAITICKYK+G+GLVEGTECSVCL+EF+E
Sbjct: 33  SHDDFIDEDQEPVVDHPIWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEE 92

Query: 108 DETLRLLPKCNHAFHIPCIDTWLRSHTNCPLCRAGI 1
           DE +RLLPKCNHAFHIPCIDTWL SHTNCP+CRAGI
Sbjct: 93  DEAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCRAGI 128


>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score =  185 bits (469), Expect = 4e-45
 Identities = 80/95 (84%), Positives = 89/95 (93%)
 Frame = -1

Query: 285 HQDFLDEDHGFVLDHPIWYIRTIGLQPSVISAITICKYKKGEGLVEGTECSVCLSEFQED 106
           H DF+DED   V+DHPIWYIRT+GLQPSVISAITICKYK+G+GLVEGTECSVCL+EF+ED
Sbjct: 108 HDDFIDEDQEPVVDHPIWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEED 167

Query: 105 ETLRLLPKCNHAFHIPCIDTWLRSHTNCPLCRAGI 1
           E +RLLPKCNHAFHIPCIDTWL SHTNCP+CRAGI
Sbjct: 168 EAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCRAGI 202


>gb|AFK33981.1| unknown [Lotus japonicus]
          Length = 404

 Score =  179 bits (453), Expect = 3e-43
 Identities = 75/95 (78%), Positives = 86/95 (90%)
 Frame = -1

Query: 285 HQDFLDEDHGFVLDHPIWYIRTIGLQPSVISAITICKYKKGEGLVEGTECSVCLSEFQED 106
           H DFLDE+HG ++DHPIWYIRT GL  S+I AIT+C+YKKGEGL+EGTECSVCLSEFQE 
Sbjct: 121 HDDFLDEEHGAIVDHPIWYIRTTGLHQSIIKAITVCRYKKGEGLIEGTECSVCLSEFQES 180

Query: 105 ETLRLLPKCNHAFHIPCIDTWLRSHTNCPLCRAGI 1
           E+LRLLPKC+HAFH+PCIDTWL SHTNCP+CRA I
Sbjct: 181 ESLRLLPKCHHAFHLPCIDTWLNSHTNCPMCRAPI 215


>ref|XP_003541479.1| PREDICTED: putative RING-H2 finger protein ATL53-like [Glycine max]
          Length = 352

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/100 (79%), Positives = 90/100 (90%), Gaps = 4/100 (4%)
 Frame = -1

Query: 288 THQDFLDED----HGFVLDHPIWYIRTIGLQPSVISAITICKYKKGEGLVEGTECSVCLS 121
           T QDFLDE+    HG V+DHPIWYIRT GLQ +VI+AIT+CKY+K EGL+EGT+CSVCLS
Sbjct: 102 TEQDFLDEEEQQQHGPVVDHPIWYIRTTGLQQAVITAITVCKYRKDEGLIEGTDCSVCLS 161

Query: 120 EFQEDETLRLLPKCNHAFHIPCIDTWLRSHTNCPLCRAGI 1
           EFQEDE+LRLLPKCNHAFH+PCIDTWLRSHTNCP+CRA I
Sbjct: 162 EFQEDESLRLLPKCNHAFHLPCIDTWLRSHTNCPMCRAPI 201


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