BLASTX nr result

ID: Bupleurum21_contig00019698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019698
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...    92   7e-17
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]          91   1e-16
ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...    91   1e-16
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...    89   6e-16

>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 68/170 (40%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
 Frame = -1

Query: 561 DEEQILMWRGDDWKSMYTRARIARS-PVHDMTRNGLN---RSDLELER---RRVQSSPKM 403
           D+EQILMWRG DWKSMY  AR + S P      +G +   +SD + +    + + SSPKM
Sbjct: 335 DDEQILMWRGQDWKSMYPEARPSISFPAELDIASGSDDSGKSDDDCDNSDAKILSSSPKM 394

Query: 402 LSLWNRAIESNQAXXXXXXXXXXXXXLEKVEEFERISQATVHSFPANILPDEDAHGKSNE 223
           + LW  A+ESN+A             L KVEEFE ISQAT HS+PA ++  ED  G SN 
Sbjct: 395 MLLWKHALESNKAILLDEIDLGPDALLTKVEEFEGISQATEHSYPALVMSSED--GSSNS 452

Query: 222 EVGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPQGSLPIDLIAER 73
               E                              SAP GSL IDLIAE+
Sbjct: 453 ISTFEDDSHSENFSEDDMYSDDEYYDSESFEELETSAPPGSLSIDLIAEK 502


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 60/172 (34%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
 Frame = -1

Query: 561 DEEQILMWRGDDWKSMYTRARIARSPVHDMTRNGLNRSDL------ELERRRVQSSPKML 400
           D+EQIL WRG  WKSMY  A     PV     +GL  S +       L+ + V +SPKM+
Sbjct: 389 DDEQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGIPKSNHHRLDTKAVSASPKMM 448

Query: 399 SLWNRAIESNQAXXXXXXXXXXXXXLEKVEEFERISQATVHSFPANILPDEDAHGKSNEE 220
           SLW  AIES++A             L+ VEEFE ISQAT HS+PA ++  ED  G +  E
Sbjct: 449 SLWKSAIESSKALLLDETGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAE 508

Query: 219 VGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPQGSLPIDLIAERFSD 64
                                               P GSLP+DL+A++  +
Sbjct: 509 YEGYNSEDYSEDEMYNDDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 560


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
 Frame = -1

Query: 561 DEEQILMWRGDDWKSMYTRARIARSPVHDMTRNGLNRSDLELER--------RRVQSSPK 406
           D EQILMWRG DWKS+ +  R A  P    + + L  S   +E           +++SPK
Sbjct: 435 DNEQILMWRGKDWKSVISDDRSAPLPSRASSNDSLGSSGESVENSDLLNGNHHTIKTSPK 494

Query: 405 MLSLWNRAIESNQAXXXXXXXXXXXXXLEKVEEFERISQATVHSFPANILPDEDAHGKSN 226
           M  LW RAI+SN+A             LE+VEEFERISQAT HS+PA I   E+    ++
Sbjct: 495 MKLLWERAIDSNKALMLDEIGLAPDELLERVEEFERISQATEHSYPAFITSSEEVSSPAD 554

Query: 225 EEVGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPQGSLPIDLIAERFS 67
               Q+                                P GSLP+D+IA++ S
Sbjct: 555 SPESQD------HSEANYNSDDDVGREEDLFDNVDPLVPLGSLPVDIIAKKLS 601


>ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Cucumis sativus]
          Length = 602

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 61/173 (35%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
 Frame = -1

Query: 561 DEEQILMWRGDDWKSMYTRARIARSPVHDMTRNGLNRSDLELER--------RRVQSSPK 406
           D EQILMWRG DWKS+ +  R A  P    + + L      LE           +++SPK
Sbjct: 434 DNEQILMWRGKDWKSIISDDRSAPLPSRASSNDSLGSPGESLENSDLLHGNHHTIKTSPK 493

Query: 405 MLSLWNRAIESNQAXXXXXXXXXXXXXLEKVEEFERISQATVHSFPANILPDEDAHGKSN 226
           M  LW  AI+SN+A             LEKVEEFERISQAT HS+PA I   ED     +
Sbjct: 494 MKLLWEHAIDSNKALLLDEIGLAPDDLLEKVEEFERISQATEHSYPAFITSSEDVSSPDD 553

Query: 225 EEVGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPQGSLPIDLIAERFS 67
               Q+                                P GSLP+D+IA++ S
Sbjct: 554 SPKSQD------HTEANYNSDDDVGREEDLFDNADPLVPLGSLPVDIIAKKLS 600


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Vitis vinifera]
          Length = 560

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 60/172 (34%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
 Frame = -1

Query: 561 DEEQILMWRGDDWKSMYTRARIARSPVHDMTRNGLNRSDL------ELERRRVQSSPKML 400
           D+EQIL WRG  WKSMY  A     PV     +GL  S +       L+ + V +SPKM+
Sbjct: 389 DDEQILTWRGHGWKSMYQGAPSFLIPVVADVASGLEGSGVPKSNHHRLDTKAVSASPKMM 448

Query: 399 SLWNRAIESNQAXXXXXXXXXXXXXLEKVEEFERISQATVHSFPANILPDEDAHGKSNEE 220
           SLW  AIES++A             L+ VEEFE ISQAT HS+PA ++  ED  G +  E
Sbjct: 449 SLWKSAIESSKALLLDEIGLGPDALLKVVEEFEGISQATEHSYPALVMSSEDGTGGTKAE 508

Query: 219 VGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPQGSLPIDLIAERFSD 64
             +                                 P GSLP+DL+A++  +
Sbjct: 509 -HEGYNSEDYSEDEMYNDDDDEYLVNESLEEMESPVPLGSLPVDLLAKQLGE 559


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