BLASTX nr result

ID: Bupleurum21_contig00019696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019696
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272565.1| PREDICTED: RNA-binding protein pno1-like [Vi...   207   6e-52
ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Gl...   207   9e-52
ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Gl...   204   5e-51
gb|ACU24003.1| unknown [Glycine max]                                  204   6e-51
gb|ACU18933.1| unknown [Glycine max]                                  204   8e-51

>ref|XP_002272565.1| PREDICTED: RNA-binding protein pno1-like [Vitis vinifera]
           gi|225455824|ref|XP_002272932.1| PREDICTED: RNA-binding
           protein pno1-like [Vitis vinifera]
          Length = 224

 Score =  207 bits (528), Expect = 6e-52
 Identities = 102/127 (80%), Positives = 113/127 (88%), Gaps = 2/127 (1%)
 Frame = -3

Query: 377 MESDKGVTSMEVEKVPSEANRVS--FASKPNFQPLKAHEISDGQVQFRKVSVPPHRYTPL 204
           M+S++  TSMEVE V SE N  S  F SKP F+PLKAHE+S+G+VQFRKVSVPPHRYTPL
Sbjct: 1   MQSNEPATSMEVENVLSEPNPTSGTFPSKPKFEPLKAHEMSEGRVQFRKVSVPPHRYTPL 60

Query: 203 KKAWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKCADFVHAFMLGFDVID 24
           KKAWMEIYTP+YEQMKIDIRMNLK RKVELKTR+DTPDISNLQKC DFVHAFMLGF V+D
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCTDFVHAFMLGFGVVD 120

Query: 23  AVALLRL 3
           A+ALLRL
Sbjct: 121 AIALLRL 127


>ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/125 (80%), Positives = 112/125 (89%)
 Frame = -3

Query: 377 MESDKGVTSMEVEKVPSEANRVSFASKPNFQPLKAHEISDGQVQFRKVSVPPHRYTPLKK 198
           MES++  +SMEVE VPSEA  +    KP F+PLK HE+SDGQVQFRKV+VPPHRYTPLKK
Sbjct: 1   MESNQAASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 197 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDAV 18
           AWM+IYTP+YEQMKID+RMNLK R+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 17  ALLRL 3
           ALLRL
Sbjct: 119 ALLRL 123


>ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  204 bits (520), Expect = 5e-51
 Identities = 99/125 (79%), Positives = 112/125 (89%)
 Frame = -3

Query: 377 MESDKGVTSMEVEKVPSEANRVSFASKPNFQPLKAHEISDGQVQFRKVSVPPHRYTPLKK 198
           MES++  +SMEVE VPSEA  +    KP F+PLK HE+SDGQVQFRKV+VPPHRYTPLKK
Sbjct: 1   MESNQEASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 197 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDAV 18
           AWM+IY+P+YEQMKID+RMNLK R+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYSPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 17  ALLRL 3
           ALLRL
Sbjct: 119 ALLRL 123


>gb|ACU24003.1| unknown [Glycine max]
          Length = 220

 Score =  204 bits (519), Expect = 6e-51
 Identities = 99/125 (79%), Positives = 111/125 (88%)
 Frame = -3

Query: 377 MESDKGVTSMEVEKVPSEANRVSFASKPNFQPLKAHEISDGQVQFRKVSVPPHRYTPLKK 198
           M S++  +SMEVE VPSEA  +    KP F+PLK HE+SDGQVQFRKV+VPPHRYTPLKK
Sbjct: 1   MGSNQAASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 197 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDAV 18
           AWM+IYTP+YEQMKID+RMNLK R+VELKTR DTPDISNLQKCADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 17  ALLRL 3
           ALLRL
Sbjct: 119 ALLRL 123


>gb|ACU18933.1| unknown [Glycine max]
          Length = 208

 Score =  204 bits (518), Expect = 8e-51
 Identities = 98/125 (78%), Positives = 112/125 (89%)
 Frame = -3

Query: 377 MESDKGVTSMEVEKVPSEANRVSFASKPNFQPLKAHEISDGQVQFRKVSVPPHRYTPLKK 198
           MES++  +SMEVE VPSEA  +    KP F+PLK HE+SDGQVQFRKV+VPPHRYTPLKK
Sbjct: 1   MESNQEASSMEVETVPSEAKLLP--PKPKFEPLKPHEVSDGQVQFRKVNVPPHRYTPLKK 58

Query: 197 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKCADFVHAFMLGFDVIDAV 18
           AWM+IY+P+YEQMKID+RMNLK R+VELKTR DTPDISNLQ+CADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYSPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQECADFVHAFMLGFDVIDAI 118

Query: 17  ALLRL 3
           ALLRL
Sbjct: 119 ALLRL 123


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