BLASTX nr result

ID: Bupleurum21_contig00019681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019681
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...    73   6e-11
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...    73   6e-11
ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin...    70   5e-10
ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin...    56   7e-06
emb|CBI21978.3| unnamed protein product [Vitis vinifera]               56   7e-06

>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 48/107 (44%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
 Frame = -1

Query: 676 MSHSG-------VDKLADRLRKSVKCEDNEIEINKPDFREHDLGSPVTPLXXXXXXXXXX 518
           MSHSG        D L+DR R SV CE     +NKPDFRE DLGSPV+PL          
Sbjct: 1   MSHSGNPISDLRFDHLSDRFRDSVSCE-----VNKPDFRELDLGSPVSPLRTRHQTGGGP 55

Query: 517 XXXXXXXXXXXXXXSNS---LPRKSDSAGTNHSGELSGSVESSPTHA 386
                          N    + ++SDS   NHSGELSGS ESSPT A
Sbjct: 56  AASSSSSSSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAA 102


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 48/107 (44%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
 Frame = -1

Query: 676 MSHSG-------VDKLADRLRKSVKCEDNEIEINKPDFREHDLGSPVTPLXXXXXXXXXX 518
           MSHSG        D L+DR R SV CE     +NKPDFRE DLGSPV+PL          
Sbjct: 1   MSHSGNPISDLRFDHLSDRFRDSVSCE-----VNKPDFRELDLGSPVSPLRTRHQTGGGP 55

Query: 517 XXXXXXXXXXXXXXSNS---LPRKSDSAGTNHSGELSGSVESSPTHA 386
                          N    + ++SDS   NHSGELSGS ESSPT A
Sbjct: 56  AASSSSSSSGSVSGRNGPNPVAKRSDSGPNNHSGELSGSSESSPTAA 102


>ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 656

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = -1

Query: 676 MSHSGVDKLADRLRKSVKCEDNEIEINKPDFREHDLGSPVTPL------XXXXXXXXXXX 515
           MS  G+  +ADR R+++ C++N     KPDF+E DLGSPV+PL                 
Sbjct: 8   MSEVGLGAVADRFRETLNCDNN-----KPDFKELDLGSPVSPLRTRRSGPAGSGVTTTSS 62

Query: 514 XXXXXXXXXXXXXSNSLPRKSDSAGTNHSGELSGSVESSPTHA 386
                        +N L +++D AG NHSGELSGS ESSPT A
Sbjct: 63  SSSSSGSVSCRNANNQLAKRADGAGNNHSGELSGSSESSPTAA 105


>ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 692

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
 Frame = -1

Query: 676 MSHS---------GVDK-LADRLRKSVKCEDNEIEINKPDFREHDLGSPVTPLXXXXXXX 527
           MSHS         G+D   +DR R ++ C+DN   INKPDFRE DLGSPV+PL       
Sbjct: 1   MSHSSGKPVSEVVGIDATFSDRFRDALTCDDNN-NINKPDFRELDLGSPVSPLRTTRGPA 59

Query: 526 XXXXXXXXXXXXXXXXXSNSLPRKSDSAGT--------NHSGELSGSVESSPT 392
                            +       +++ T        N+SGELSGS E+SPT
Sbjct: 60  ASSSSSSSGSFSGRTGPTRKPESAQNNSNTNTHIHSNNNNSGELSGSSENSPT 112


>emb|CBI21978.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 34/90 (37%), Positives = 45/90 (50%)
 Frame = -1

Query: 664 GVDKLADRLRKSVKCEDNEIEINKPDFREHDLGSPVTPLXXXXXXXXXXXXXXXXXXXXX 485
           G+D L+DR+R ++ CE N     KPDFRE DLGSPV+P                      
Sbjct: 12  GIDSLSDRVRDTLSCESN-----KPDFRELDLGSPVSP---------------SSGSVSG 51

Query: 484 XXXSNSLPRKSDSAGTNHSGELSGSVESSP 395
                 L ++ D +  N+SGELS S E+SP
Sbjct: 52  KTGGTQLVKRPDGSLNNYSGELSASSETSP 81


Top