BLASTX nr result

ID: Bupleurum21_contig00019680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019680
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...   112   4e-23
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...   112   4e-23
ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin...   108   4e-22
ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin...   103   1e-20

>ref|XP_002317465.1| predicted protein [Populus trichocarpa] gi|222860530|gb|EEE98077.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score =  120 bits (300), Expect = 1e-25
 Identities = 81/183 (44%), Positives = 98/183 (53%), Gaps = 20/183 (10%)
 Frame = +3

Query: 9   EINKPDSRELD---PVTPLRTIIXXXXXXXXXXXXXXXXXXXXXLPKKSDSAGT------ 161
           E NKPD RELD   PV+PLRT                           S S+G+      
Sbjct: 32  EANKPDFRELDLGSPVSPLRT--RGGLITTTTATATAATTTTTTTSSSSSSSGSASGAQN 89

Query: 162 --------NHSGELSGSVESSPTHAGRSGKPGHMRXXXXXXXXXXXXXXXXXGSVNSPAP 317
                   NHSGELS S ESSPT   + G+PGH R                  +VNSPA 
Sbjct: 90  PLHKPNNSNHSGELSNSSESSPTAGAKKGQPGHSRSDSLTYSGQITSQ----SAVNSPA- 144

Query: 318 AANVLPTGNICPTGKILKTGM--AGRSSRTDVLGTGTGHYGHGSIIR-GGAVKSAGVGVM 488
             NVLPTGNICP+G+ILKTGM  A RS++ DVLG+GT +YGHGSI+R GG+ K A + V+
Sbjct: 145 TGNVLPTGNICPSGRILKTGMGMANRSAKADVLGSGTANYGHGSIMRGGGSAKCANLDVV 204

Query: 489 NSS 497
           NS+
Sbjct: 205 NSA 207


>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score =  112 bits (279), Expect = 4e-23
 Identities = 80/176 (45%), Positives = 94/176 (53%), Gaps = 19/176 (10%)
 Frame = +3

Query: 9   EINKPDSRELD---PVTPLRTIIXXXXXXXXXXXXXXXXXXXXX-----LPKKSDSAGTN 164
           E+NKPD RELD   PV+PLRT                            + K+SDS   N
Sbjct: 27  EVNKPDFRELDLGSPVSPLRTRHQTGGGPAASSSSSSSGSVSGRNGPNPVAKRSDSGPNN 86

Query: 165 HSGELSGSVESSPTHAG--------RSGKPGHMRXXXXXXXXXXXXXXXXXGSVNSPAPA 320
           HSGELSGS ESSPT A         ++ K GH R                  SV SP+  
Sbjct: 87  HSGELSGSSESSPTAAESLRSIGTPKNFKSGHNRSDSASNHPLIYSGQSQ-SSVTSPS-- 143

Query: 321 ANVLPTGNICPTGKILKTGM--AGRSSRTDVLGTGTGHYGHGSIIRG-GAVKSAGV 479
            NVLPTGNICP+G+ILK  M    RSSRTDVLG+G+G+YGHGSI+RG G VK+  V
Sbjct: 144 -NVLPTGNICPSGRILKPSMPSTNRSSRTDVLGSGSGNYGHGSIMRGLGGVKTGAV 198


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score =  112 bits (279), Expect = 4e-23
 Identities = 80/176 (45%), Positives = 94/176 (53%), Gaps = 19/176 (10%)
 Frame = +3

Query: 9   EINKPDSRELD---PVTPLRTIIXXXXXXXXXXXXXXXXXXXXX-----LPKKSDSAGTN 164
           E+NKPD RELD   PV+PLRT                            + K+SDS   N
Sbjct: 27  EVNKPDFRELDLGSPVSPLRTRHQTGGGPAASSSSSSSGSVSGRNGPNPVAKRSDSGPNN 86

Query: 165 HSGELSGSVESSPTHAG--------RSGKPGHMRXXXXXXXXXXXXXXXXXGSVNSPAPA 320
           HSGELSGS ESSPT A         ++ K GH R                  SV SP+  
Sbjct: 87  HSGELSGSSESSPTAAESLRSIGTPKNFKSGHNRSDSASNHPLIYSGQSQ-SSVTSPS-- 143

Query: 321 ANVLPTGNICPTGKILKTGM--AGRSSRTDVLGTGTGHYGHGSIIRG-GAVKSAGV 479
            NVLPTGNICP+G+ILK  M    RSSRTDVLG+G+G+YGHGSI+RG G VK+  V
Sbjct: 144 -NVLPTGNICPSGRILKPSMPSTNRSSRTDVLGSGSGNYGHGSIMRGLGGVKTGAV 198


>ref|XP_002283097.2| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 656

 Score =  108 bits (270), Expect = 4e-22
 Identities = 73/156 (46%), Positives = 83/156 (53%), Gaps = 19/156 (12%)
 Frame = +3

Query: 15  NKPDSRELD---PVTPLRTI--------IXXXXXXXXXXXXXXXXXXXXXLPKKSDSAGT 161
           NKPD +ELD   PV+PLRT         +                     L K++D AG 
Sbjct: 29  NKPDFKELDLGSPVSPLRTRRSGPAGSGVTTTSSSSSSSGSVSCRNANNQLAKRADGAGN 88

Query: 162 NHSGELSGSVESSPTHA--------GRSGKPGHMRXXXXXXXXXXXXXXXXXGSVNSPAP 317
           NHSGELSGS ESSPT A         R+ KPGH R                 GSVNSP+ 
Sbjct: 89  NHSGELSGSSESSPTAAESVRSGGASRNFKPGHGRSDSGGAHPLIYSGG---GSVNSPS- 144

Query: 318 AANVLPTGNICPTGKILKTGMAGRSSRTDVLGTGTG 425
             NV PTGNICP+GKILKTGMA RSSR+DVLG+G G
Sbjct: 145 -VNVFPTGNICPSGKILKTGMANRSSRSDVLGSGMG 179


>ref|XP_003541820.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 692

 Score =  103 bits (258), Expect = 1e-20
 Identities = 72/168 (42%), Positives = 87/168 (51%), Gaps = 19/168 (11%)
 Frame = +3

Query: 12  INKPDSRELD---PVTPLRTIIXXXXXXXXXXXXXXXXXXXXXLPKKSDSA--------- 155
           INKPD RELD   PV+PLRT                         +K +SA         
Sbjct: 35  INKPDFRELDLGSPVSPLRTTRGPAASSSSSSSGSFSGRTGPT--RKPESAQNNSNTNTH 92

Query: 156 ---GTNHSGELSGSVESSPTHAGRSGKPGHMRXXXXXXXXXXXXXXXXXGSVNSPAPAAN 326
                N+SGELSGS E+SPT    + KPGH R                     + +P  N
Sbjct: 93  IHSNNNNSGELSGSSENSPT----ARKPGHTRSDSGSAPVPLIY-----SGQTATSPVMN 143

Query: 327 VLPTGNICPTGKILKTGM----AGRSSRTDVLGTGTGHYGHGSIIRGG 458
           VLPTGNICP+GKILKTGM    + R+SR+DVLG+G G+YGHGSI+RGG
Sbjct: 144 VLPTGNICPSGKILKTGMTPNRSSRTSRSDVLGSGMGNYGHGSIMRGG 191


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