BLASTX nr result

ID: Bupleurum21_contig00019672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019672
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34155.3| unnamed protein product [Vitis vinifera]              470   e-130
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   470   e-130
ref|XP_002531290.1| protein with unknown function [Ricinus commu...   462   e-128
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   458   e-127
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra...   458   e-127

>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  470 bits (1210), Expect = e-130
 Identities = 234/279 (83%), Positives = 252/279 (90%), Gaps = 1/279 (0%)
 Frame = -3

Query: 921  NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHSXXXXXQ-NPATAQEELTQSE 745
            NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHH      Q N ATAQEELTQSE
Sbjct: 1444 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQPQQQPNSATAQEELTQSE 1503

Query: 744  IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDVAPA 565
            IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGD APA
Sbjct: 1504 IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDTAPA 1563

Query: 564  QKSRIELCLENHSGLNIHGNPENSSSSKSNIHYDRPHNSVDFGLTVVLDSAHIPHLNAAG 385
            QK RIELCLENH+GL +  + ENSS+SKSNIHYDR HNSVDFGLTVVLD AHIPH+NAAG
Sbjct: 1564 QKPRIELCLENHAGLKMDESSENSSTSKSNIHYDRSHNSVDFGLTVVLDPAHIPHINAAG 1623

Query: 384  GAAWLPYCVSVRLRYSFGEKPNVSFLGMEGSHGGRACWHRIDDWDKCKQRVIRTVEMNGS 205
            GAAWLPYCVSVRLRYSFGE   VSFLGMEGSHGGRACW RIDDW+KCK RV+RTVEM+G 
Sbjct: 1624 GAAWLPYCVSVRLRYSFGENSTVSFLGMEGSHGGRACWLRIDDWEKCKHRVVRTVEMSGC 1683

Query: 204  STGELNQGRLKIIADSVQRTLHVCLQGLKDGTAVSGSTG 88
            S G+++QGRLKI+AD+VQR LHV LQGL+DG+ V+ ++G
Sbjct: 1684 SPGDMSQGRLKIVADNVQRALHVNLQGLRDGSGVASNSG 1722


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  470 bits (1210), Expect = e-130
 Identities = 234/279 (83%), Positives = 252/279 (90%), Gaps = 1/279 (0%)
 Frame = -3

Query: 921  NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHSXXXXXQ-NPATAQEELTQSE 745
            NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHH      Q N ATAQEELTQSE
Sbjct: 1478 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQPQQQPNSATAQEELTQSE 1537

Query: 744  IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDVAPA 565
            IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGD APA
Sbjct: 1538 IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDTAPA 1597

Query: 564  QKSRIELCLENHSGLNIHGNPENSSSSKSNIHYDRPHNSVDFGLTVVLDSAHIPHLNAAG 385
            QK RIELCLENH+GL +  + ENSS+SKSNIHYDR HNSVDFGLTVVLD AHIPH+NAAG
Sbjct: 1598 QKPRIELCLENHAGLKMDESSENSSTSKSNIHYDRSHNSVDFGLTVVLDPAHIPHINAAG 1657

Query: 384  GAAWLPYCVSVRLRYSFGEKPNVSFLGMEGSHGGRACWHRIDDWDKCKQRVIRTVEMNGS 205
            GAAWLPYCVSVRLRYSFGE   VSFLGMEGSHGGRACW RIDDW+KCK RV+RTVEM+G 
Sbjct: 1658 GAAWLPYCVSVRLRYSFGENSTVSFLGMEGSHGGRACWLRIDDWEKCKHRVVRTVEMSGC 1717

Query: 204  STGELNQGRLKIIADSVQRTLHVCLQGLKDGTAVSGSTG 88
            S G+++QGRLKI+AD+VQR LHV LQGL+DG+ V+ ++G
Sbjct: 1718 SPGDMSQGRLKIVADNVQRALHVNLQGLRDGSGVASNSG 1756


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
            gi|223529123|gb|EEF31103.1| protein with unknown function
            [Ricinus communis]
          Length = 1746

 Score =  462 bits (1189), Expect = e-128
 Identities = 229/279 (82%), Positives = 252/279 (90%), Gaps = 1/279 (0%)
 Frame = -3

Query: 921  NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHSXXXXXQ-NPATAQEELTQSE 745
            NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHH      Q N  T+QEEL QSE
Sbjct: 1467 NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQQNSVTSQEELIQSE 1526

Query: 744  IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDVAPA 565
            I EICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKG+ Q QGG++AP 
Sbjct: 1527 IAEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGMTQVQGGEIAPG 1586

Query: 564  QKSRIELCLENHSGLNIHGNPENSSSSKSNIHYDRPHNSVDFGLTVVLDSAHIPHLNAAG 385
            QK RIELCLENH+GL+ + N ENSS++KSNIHYDRPHNSVDF LTVVLD A IPH+NAAG
Sbjct: 1587 QKPRIELCLENHAGLSENDNSENSSAAKSNIHYDRPHNSVDFALTVVLDPALIPHVNAAG 1646

Query: 384  GAAWLPYCVSVRLRYSFGEKPNVSFLGMEGSHGGRACWHRIDDWDKCKQRVIRTVEMNGS 205
            GAAWLPYCVSVRLRYSFGE  NV+FLGMEGSHGGRACW RIDDW+KCKQRVIRTVE+NGS
Sbjct: 1647 GAAWLPYCVSVRLRYSFGENTNVTFLGMEGSHGGRACWLRIDDWEKCKQRVIRTVEVNGS 1706

Query: 204  STGELNQGRLKIIADSVQRTLHVCLQGLKDGTAVSGSTG 88
            +TG++ QGRL+++ADSVQRTLH+CLQGL+DG  V+GS+G
Sbjct: 1707 TTGDVAQGRLRMVADSVQRTLHMCLQGLRDG-GVTGSSG 1744


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  458 bits (1179), Expect = e-127
 Identities = 229/278 (82%), Positives = 251/278 (90%), Gaps = 1/278 (0%)
 Frame = -3

Query: 921  NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHSXXXXXQ-NPATAQEELTQSE 745
            NLD EQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHH      Q N ATAQEELTQSE
Sbjct: 1052 NLDPEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQQNSATAQEELTQSE 1111

Query: 744  IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDVAPA 565
            IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKG+AQAQGGD+APA
Sbjct: 1112 IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGVAQAQGGDIAPA 1171

Query: 564  QKSRIELCLENHSGLNIHGNPENSSSSKSNIHYDRPHNSVDFGLTVVLDSAHIPHLNAAG 385
            QK RIELCLENHSGL+   N E S+S KSNIHYDR HNSVDF LTVVLD AHIPH+NAAG
Sbjct: 1172 QKPRIELCLENHSGLSTDENSERSTS-KSNIHYDRQHNSVDFALTVVLDPAHIPHMNAAG 1230

Query: 384  GAAWLPYCVSVRLRYSFGEKPNVSFLGMEGSHGGRACWHRIDDWDKCKQRVIRTVEMNGS 205
            GAAWLPYCVSV+LRYSFGE   VSFLGMEGSHGGRACW R+DDW+KCKQRV RTVE++GS
Sbjct: 1231 GAAWLPYCVSVKLRYSFGESLVVSFLGMEGSHGGRACWLRVDDWEKCKQRVARTVEVSGS 1290

Query: 204  STGELNQGRLKIIADSVQRTLHVCLQGLKDGTAVSGST 91
            STG+++QGRL+I+AD+VQRTLH+CLQGL++G+ ++  T
Sbjct: 1291 STGDVSQGRLRIVADNVQRTLHMCLQGLREGSEIATIT 1328


>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like [Cucumis sativus]
          Length = 1800

 Score =  458 bits (1179), Expect = e-127
 Identities = 229/278 (82%), Positives = 251/278 (90%), Gaps = 1/278 (0%)
 Frame = -3

Query: 921  NLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHSXXXXXQ-NPATAQEELTQSE 745
            NLD EQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHH      Q N ATAQEELTQSE
Sbjct: 1520 NLDPEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQPNSATAQEELTQSE 1579

Query: 744  IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQAQGGDVAPA 565
            IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKG+AQAQGGD+APA
Sbjct: 1580 IGEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGVAQAQGGDIAPA 1639

Query: 564  QKSRIELCLENHSGLNIHGNPENSSSSKSNIHYDRPHNSVDFGLTVVLDSAHIPHLNAAG 385
            QK RIELCLENHSGL+   N E S+S KSNIHYDR HNSVDF LTVVLD AHIPH+NAAG
Sbjct: 1640 QKPRIELCLENHSGLSTDENSERSTS-KSNIHYDRQHNSVDFALTVVLDPAHIPHMNAAG 1698

Query: 384  GAAWLPYCVSVRLRYSFGEKPNVSFLGMEGSHGGRACWHRIDDWDKCKQRVIRTVEMNGS 205
            GAAWLPYCVSV+LRYSFGE   VSFLGMEGSHGGRACW R+DDW+KCKQRV RTVE++GS
Sbjct: 1699 GAAWLPYCVSVKLRYSFGESLVVSFLGMEGSHGGRACWLRVDDWEKCKQRVARTVEVSGS 1758

Query: 204  STGELNQGRLKIIADSVQRTLHVCLQGLKDGTAVSGST 91
            STG+++QGRL+I+AD+VQRTLH+CLQGL++G+ ++  T
Sbjct: 1759 STGDVSQGRLRIVADNVQRTLHMCLQGLREGSEIATIT 1796


Top