BLASTX nr result

ID: Bupleurum21_contig00019661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019661
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...    78   7e-13
ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213...    77   1e-12
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002870197.1| At4g15950 [Arabidopsis lyrata subsp. lyrata]...    65   8e-09

>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/57 (64%), Positives = 47/57 (82%)
 Frame = +2

Query: 2   SLKKYGVADSEICMIANMHPEDTDEVFALVPSLEGKKNKLEEPLESALGELAKVNRS 172
           +LKKYGV DSEIC+IAN+ P+ TDEVFAL+PSL+ K++KL EP+ + L ELAKV  S
Sbjct: 164 TLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNVLSELAKVKSS 220


>ref|XP_004134991.1| PREDICTED: uncharacterized protein LOC101213971 [Cucumis sativus]
          Length = 242

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/54 (66%), Positives = 46/54 (85%)
 Frame = +2

Query: 2   SLKKYGVADSEICMIANMHPEDTDEVFALVPSLEGKKNKLEEPLESALGELAKV 163
           +LKKYGV DSEIC+IAN+ P+ TDEVFAL+PSL+ K++KL EP+ + L ELAKV
Sbjct: 164 TLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRSKLSEPINNVLSELAKV 217


>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +2

Query: 5   LKKYGVADSEICMIANMHPEDTDEVFALVPSLEGKKNKLEEPLESALGELAKVNRSA 175
           LKK+GV++ EIC IAN+ P+  DEVFALVPSL+ KKN L EPL+  LG+L+++ + A
Sbjct: 147 LKKHGVSEGEICTIANVCPDGVDEVFALVPSLKSKKNVLREPLKDILGQLSELKQQA 203


>ref|XP_002329936.1| predicted protein [Populus trichocarpa] gi|222871958|gb|EEF09089.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = +2

Query: 2   SLKKYGVADSEICMIANMHPEDTDEVFALVPSLEGKKNKLEEPLESALGELAKVNRSA 175
           +L+KYGV+D EI +IAN+ PE  DE FALVPSL+ K + L EPL+  LGELAK  + A
Sbjct: 140 ALRKYGVSDGEISLIANVFPETADEAFALVPSLKSKASTLREPLKDILGELAKFKQPA 197


>ref|XP_002870197.1| At4g15950 [Arabidopsis lyrata subsp. lyrata]
           gi|297316033|gb|EFH46456.1| At4g15950 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 210

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +2

Query: 5   LKKYGVADSEICMIANMHPEDTDEVFALVPSLEGKKNKLEEPLESALGELAKVNRS 172
           LK +GV+D E+C+IAN  P+  DEV A +PSL+ KK  + +PL+ AL ELAK+ +S
Sbjct: 154 LKTHGVSDGEMCVIANASPDTVDEVLAFIPSLKAKKEVINQPLQDALVELAKLKKS 209


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