BLASTX nr result

ID: Bupleurum21_contig00019656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019656
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150016.1| PREDICTED: zinc finger Ran-binding domain-co...   190   2e-46
ref|XP_004170003.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   188   8e-46
gb|AFK48974.1| unknown [Lotus japonicus]                              188   8e-46
ref|XP_003609267.1| Zinc finger protein-like Ser/Thr protein kin...   186   3e-45
ref|NP_973537.2| Ran BP2/NZF zinc finger-like protein [Arabidops...   186   3e-45

>ref|XP_004150016.1| PREDICTED: zinc finger Ran-binding domain-containing protein 2-like
           [Cucumis sativus]
          Length = 140

 Score =  190 bits (483), Expect = 2e-46
 Identities = 80/138 (57%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +3

Query: 162 SSGDWMCGACQHMNFKKRDSCHRCRFPKFGSDADMASYGINREEVLAGDWYCNVMSCGAH 341
           S+GDW+C  CQ++NFKKR++CHRC +PK+G   D ++Y  N+ E LAGDWYC  +SCGAH
Sbjct: 4   SAGDWICNVCQNVNFKKREACHRCGYPKYGGP-DPSTYSYNKTEALAGDWYCTTVSCGAH 62

Query: 342 NYASRTNCFRCGASKEDIXXXXXXXXXXXXXXXENP-VPPGWKCGDWVCNRYGCGVHNYA 518
           NYASR NCFRCGA K                   +  +PPGWK GDW+C R GCGVHNYA
Sbjct: 63  NYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYA 122

Query: 519 SRMECYKCKTPKEYGGAV 572
           SRMEC+KCKTP+++GGAV
Sbjct: 123 SRMECFKCKTPRDFGGAV 140


>ref|XP_004170003.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger Ran-binding
           domain-containing protein 2-like [Cucumis sativus]
          Length = 140

 Score =  188 bits (477), Expect = 8e-46
 Identities = 79/138 (57%), Positives = 98/138 (71%), Gaps = 1/138 (0%)
 Frame = +3

Query: 162 SSGDWMCGACQHMNFKKRDSCHRCRFPKFGSDADMASYGINREEVLAGDWYCNVMSCGAH 341
           S+GDW+C  CQ++NF KR++CHRC +PK+G   D ++Y  N+ E LAGDWYC  +SCGAH
Sbjct: 4   SAGDWICNVCQNVNFXKREACHRCGYPKYGGP-DPSTYSYNKTEALAGDWYCTTVSCGAH 62

Query: 342 NYASRTNCFRCGASKEDIXXXXXXXXXXXXXXXENP-VPPGWKCGDWVCNRYGCGVHNYA 518
           NYASR NCFRCGA K                   +  +PPGWK GDW+C R GCGVHNYA
Sbjct: 63  NYASRPNCFRCGAFKSVYPGDYGAYMMGSDQYGSDASIPPGWKSGDWICPRMGCGVHNYA 122

Query: 519 SRMECYKCKTPKEYGGAV 572
           SRMEC+KCKTP+++GGAV
Sbjct: 123 SRMECFKCKTPRDFGGAV 140


>gb|AFK48974.1| unknown [Lotus japonicus]
          Length = 140

 Score =  188 bits (477), Expect = 8e-46
 Identities = 79/136 (58%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = +3

Query: 162 SSGDWMCGACQHMNFKKRDSCHRCRFPKFGSDADMASYGINREEVLAGDWYCNVMSCGAH 341
           S GDWMCGACQH+NFKKR+ C  C +PK+G   D A+Y  NR E LAGDWYC+ M+CGAH
Sbjct: 4   SGGDWMCGACQHVNFKKREQCQSCAYPKYGGP-DPATYRYNRTETLAGDWYCSAMNCGAH 62

Query: 342 NYASRTNCFRCGASKEDIXXXXXXXXXXXXXXXEN-PVPPGWKCGDWVCNRYGCGVHNYA 518
           NYASRTNC+RCG  ++D                 +   PPGWK GDW+C R GCGVHNYA
Sbjct: 63  NYASRTNCYRCGTMRDDYSSGYGGNMAGSGGYGSDCSFPPGWKNGDWICPRIGCGVHNYA 122

Query: 519 SRMECYKCKTPKEYGG 566
           SR EC+KCK P+++GG
Sbjct: 123 SRAECFKCKMPRDFGG 138


>ref|XP_003609267.1| Zinc finger protein-like Ser/Thr protein kinase-like protein
           [Medicago truncatula] gi|355510322|gb|AES91464.1| Zinc
           finger protein-like Ser/Thr protein kinase-like protein
           [Medicago truncatula]
          Length = 144

 Score =  186 bits (472), Expect = 3e-45
 Identities = 78/137 (56%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
 Frame = +3

Query: 162 SSGDWMCGACQHMNFKKRDSCHRCRFPKFGSDADMASYGINREEVLAGDWYCNVMSCGAH 341
           S GDWMCGAC+H+NFKKR++C  C +PK+G   D ++Y  NR E LAGDW+C  M+CGAH
Sbjct: 8   SGGDWMCGACEHINFKKREACQNCGYPKYGGP-DPSTYRYNRTETLAGDWFCTSMNCGAH 66

Query: 342 NYASRTNCFRCGASKEDIXXXXXXXXXXXXXXXEN-PVPPGWKCGDWVCNRYGCGVHNYA 518
           NYASR+NC+RCGA K+                  +   PPGWK GDW+C R GCG+HNYA
Sbjct: 67  NYASRSNCYRCGAFKDPYSSGYGGNMVGSGGYGSDCSSPPGWKSGDWICPRIGCGIHNYA 126

Query: 519 SRMECYKCKTPKEYGGA 569
           SR ECYKCK P++YGGA
Sbjct: 127 SRTECYKCKMPRDYGGA 143


>ref|NP_973537.2| Ran BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
           gi|48310248|gb|AAT41783.1| At2g26695 [Arabidopsis
           thaliana] gi|50198944|gb|AAT70475.1| At2g26695
           [Arabidopsis thaliana] gi|330252782|gb|AEC07876.1| Ran
           BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
          Length = 138

 Score =  186 bits (472), Expect = 3e-45
 Identities = 77/135 (57%), Positives = 95/135 (70%)
 Frame = +3

Query: 162 SSGDWMCGACQHMNFKKRDSCHRCRFPKFGSDADMASYGINREEVLAGDWYCNVMSCGAH 341
           + GDW+CGACQH NFKKR+SC +C +PKFG   D+++Y  NR EV+AGDWYC  ++CG+H
Sbjct: 4   TGGDWLCGACQHANFKKRESCQKCGYPKFGG-VDVSTYLYNRTEVMAGDWYCGALNCGSH 62

Query: 342 NYASRTNCFRCGASKEDIXXXXXXXXXXXXXXXENPVPPGWKCGDWVCNRYGCGVHNYAS 521
           NYASRT+C+RCG  K +                    PPGWK GDWVC R GCGVHNYAS
Sbjct: 63  NYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHNYAS 122

Query: 522 RMECYKCKTPKEYGG 566
           R EC+KCKT ++YGG
Sbjct: 123 RAECFKCKTTRDYGG 137



 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
 Frame = +3

Query: 156 EMSSGDWMCGA--CQHMNFKKRDSCHRC-----RFPKFGSDADMASYGINREEV----LA 302
           E+ +GDW CGA  C   N+  R SC+RC      + +    A M +YG +          
Sbjct: 46  EVMAGDWYCGALNCGSHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKT 105

Query: 303 GDWYCNVMSCGAHNYASRTNCFRCGASKE 389
           GDW C  + CG HNYASR  CF+C  +++
Sbjct: 106 GDWVCPRVGCGVHNYASRAECFKCKTTRD 134


Top