BLASTX nr result

ID: Bupleurum21_contig00019646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019646
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974992.1| transducin/WD40 domain-containing protein [Arab...   173   3e-41
ref|NP_974991.1| transducin/WD40 domain-containing protein [Arab...   173   3e-41
ref|XP_002517246.1| chromatin assembly factor I P60 subunit, put...   170   3e-40
ref|XP_004148649.1| PREDICTED: chromatin assembly factor 1 subun...   166   5e-39
ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arab...   165   1e-38

>ref|NP_974992.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|332010545|gb|AED97928.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 428

 Score =  173 bits (439), Expect = 3e-41
 Identities = 95/207 (45%), Positives = 127/207 (61%), Gaps = 13/207 (6%)
 Frame = +1

Query: 1   RFCPIKFSLRGTTTS-AFFNLPHRLIFTVATLNSLYIYDTESVQPIAVFAGLHYAAITDI 177
           RFCP+ F LRG+++   FF LP+RL+F +ATLNS+YIYDTE V PIAV AGLHYAAITDI
Sbjct: 229 RFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDI 288

Query: 178 SWSRTGKYLGLSSQDGYCTIIEFVDDELGSPVYVSEDKNNTCDENAPT*LPEDNNKIDAT 357
           +WS    YL LSSQDGYCT++EF D ELG  V +S  K     E     L + +  +  T
Sbjct: 289 TWSPNASYLALSSQDGYCTLVEFEDKELGEAVSISVGKKPVDGEEKKHDLEKGDELMTET 348

Query: 358 TENSRGAEAEESNDRQALIDKSSEGKQELPAK-ANEGKQPS-----------PNTQTNEQ 501
           T         + + +QA ++++ E KQ LP+K   +GK+               T+  E+
Sbjct: 349 T--------PDESKKQAELEQNEESKQPLPSKITTDGKEKEHIMQKTDDEVMTETRHEEE 400

Query: 502 KQASGNLLNTPTESKPAKRRITPMAID 582
            Q   + +NTP  +KPA++RITPMAID
Sbjct: 401 NQPLQSKVNTPVSNKPARKRITPMAID 427


>ref|NP_974991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|75337830|sp|Q9SXY1.1|FAS2_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS2;
           Short=CAF-1 subunit FAS2; AltName: Full=CAF-1 p60
           homolog; AltName: Full=Protein FASCIATA 2
           gi|4884488|dbj|BAA77766.1| FAS2 [Arabidopsis thaliana]
           gi|10178066|dbj|BAB11430.1| FAS2 [Arabidopsis thaliana]
           gi|332010547|gb|AED97930.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  173 bits (439), Expect = 3e-41
 Identities = 95/207 (45%), Positives = 127/207 (61%), Gaps = 13/207 (6%)
 Frame = +1

Query: 1   RFCPIKFSLRGTTTS-AFFNLPHRLIFTVATLNSLYIYDTESVQPIAVFAGLHYAAITDI 177
           RFCP+ F LRG+++   FF LP+RL+F +ATLNS+YIYDTE V PIAV AGLHYAAITDI
Sbjct: 288 RFCPVAFKLRGSSSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDI 347

Query: 178 SWSRTGKYLGLSSQDGYCTIIEFVDDELGSPVYVSEDKNNTCDENAPT*LPEDNNKIDAT 357
           +WS    YL LSSQDGYCT++EF D ELG  V +S  K     E     L + +  +  T
Sbjct: 348 TWSPNASYLALSSQDGYCTLVEFEDKELGEAVSISVGKKPVDGEEKKHDLEKGDELMTET 407

Query: 358 TENSRGAEAEESNDRQALIDKSSEGKQELPAK-ANEGKQPS-----------PNTQTNEQ 501
           T         + + +QA ++++ E KQ LP+K   +GK+               T+  E+
Sbjct: 408 T--------PDESKKQAELEQNEESKQPLPSKITTDGKEKEHIMQKTDDEVMTETRHEEE 459

Query: 502 KQASGNLLNTPTESKPAKRRITPMAID 582
            Q   + +NTP  +KPA++RITPMAID
Sbjct: 460 NQPLQSKVNTPVSNKPARKRITPMAID 486


>ref|XP_002517246.1| chromatin assembly factor I P60 subunit, putative [Ricinus
           communis] gi|223543617|gb|EEF45146.1| chromatin assembly
           factor I P60 subunit, putative [Ricinus communis]
          Length = 455

 Score =  170 bits (430), Expect = 3e-40
 Identities = 92/194 (47%), Positives = 119/194 (61%)
 Frame = +1

Query: 1   RFCPIKFSLRGTTTSAFFNLPHRLIFTVATLNSLYIYDTESVQPIAVFAGLHYAAITDIS 180
           RFCP+ FSLR + ++ FF LP+RLIF VATLNSLYIYDTES  PIA+ AGLHYAAITDI+
Sbjct: 287 RFCPMAFSLRESHSAGFFKLPYRLIFAVATLNSLYIYDTESAPPIAILAGLHYAAITDIA 346

Query: 181 WSRTGKYLGLSSQDGYCTIIEFVDDELGSPVYVSEDKNNTCDENAPT*LPEDNNKIDATT 360
           WS   +YL +SSQDGYCT++EF  +ELG P+ + E KN+  +EN    + E  + I   T
Sbjct: 347 WSSNAQYLAVSSQDGYCTLVEFEINELGLPITLGEHKNDIVEENKSL-IVEKPDDIIIET 405

Query: 361 ENSRGAEAEESNDRQALIDKSSEGKQELPAKANEGKQPSPNTQTNEQKQASGNLLNTPTE 540
                + A ES + +                           + +E+KQ   + +NTP  
Sbjct: 406 HTDDSSTAPESRETE--------------------------VEKHEKKQVLPSPVNTPIS 439

Query: 541 SKPAKRRITPMAID 582
           +KPAKRRITPMAID
Sbjct: 440 TKPAKRRITPMAID 453


>ref|XP_004148649.1| PREDICTED: chromatin assembly factor 1 subunit FAS2-like [Cucumis
           sativus] gi|449530800|ref|XP_004172380.1| PREDICTED:
           chromatin assembly factor 1 subunit FAS2-like [Cucumis
           sativus]
          Length = 477

 Score =  166 bits (420), Expect = 5e-39
 Identities = 93/198 (46%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
 Frame = +1

Query: 4   FCPIKFSLRGTTTSAFFNLPHRLIFTVATLNSLYIYDTESVQPIAVFAGLHYAAITDISW 183
           FCP  F LRG  ++ FF LPHR+IF VATLNSLYIYDTES  P+A+ AGLHYAAITD++W
Sbjct: 289 FCPKLFKLRGLNSAGFFKLPHRVIFAVATLNSLYIYDTESAVPLAIMAGLHYAAITDVAW 348

Query: 184 SRTGKYLGLSSQDGYCTIIEFVDDELGSPVYVSEDK-NNTCDENAP----T*LPEDNNKI 348
           S    YL LSSQDGYCT++EF +DELG P  +SED+   T D+N      T   ++N +I
Sbjct: 349 SADAHYLALSSQDGYCTLVEFENDELGLPFALSEDQIGTTTDQNMSLTDVTINDDENRRI 408

Query: 349 DATTENSRGAEAEESNDRQALIDKSSEGKQELPAKANEGKQPSPNTQTNEQKQASGNLLN 528
           +A  ++      E+  +   +I+K+S G   L    N G +        E+     ++ +
Sbjct: 409 EAEGKHEENKSVEKPEN--MVIEKASSG-DNLVESDNRGHE-------IEKASKQVSISS 458

Query: 529 TPTESKPAKRRITPMAID 582
           +    KPAKRRITPMAID
Sbjct: 459 SSNSVKPAKRRITPMAID 476


>ref|XP_002864911.1| hypothetical protein ARALYDRAFT_496675 [Arabidopsis lyrata subsp.
           lyrata] gi|297310746|gb|EFH41170.1| hypothetical protein
           ARALYDRAFT_496675 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score =  165 bits (417), Expect = 1e-38
 Identities = 92/209 (44%), Positives = 127/209 (60%), Gaps = 15/209 (7%)
 Frame = +1

Query: 1   RFCPIKFSLRGT-TTSAFFNLPHRLIFTVATLNSLYIYDTESVQPIAVFAGLHYAAITDI 177
           RFCP+ F LRG+ +   FF LP+RL+F +ATLNS+YIYDTE V PIAV AGLHYAAITDI
Sbjct: 288 RFCPVAFKLRGSHSEEGFFKLPYRLVFAIATLNSVYIYDTECVAPIAVLAGLHYAAITDI 347

Query: 178 SWSRTGKYLGLSSQDGYCTIIEFVDDELGS--PVYVSEDKNNTCDENAPT*LPEDNNKID 351
           +WS    YL LSSQDGYCT++EF D+ELG   P+ ++  +     E     L + +  + 
Sbjct: 348 TWSPNASYLALSSQDGYCTLVEFEDNELGESIPISITVGRKPVDAEEKKHDLEKADELMT 407

Query: 352 ATTENSRGAEAEESNDRQALIDKSSEGKQELPAK-ANEGKQPS-----------PNTQTN 495
            TT         + + +QA + ++ E KQ LP+K   +G++               T+  
Sbjct: 408 ETT--------PDVSKKQAELQQNEENKQPLPSKITTDGEEKEHVMQKTDDEVMTETRHE 459

Query: 496 EQKQASGNLLNTPTESKPAKRRITPMAID 582
           E+ Q   + +NTP  +KPA++RITPMAID
Sbjct: 460 EENQPLQSKVNTPVSNKPARKRITPMAID 488


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