BLASTX nr result

ID: Bupleurum21_contig00019643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019643
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vit...   313   2e-83
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   304   9e-81
ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   303   2e-80
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   300   9e-80
ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-78

>ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vitis vinifera]
          Length = 385

 Score =  313 bits (801), Expect = 2e-83
 Identities = 149/201 (74%), Positives = 161/201 (80%), Gaps = 4/201 (1%)
 Frame = -1

Query: 593 FNGSGGSKTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVVEGRRFLVQAN 414
           FNGS GSK DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRRFLVQAN
Sbjct: 173 FNGSVGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRFLVQAN 232

Query: 413 ARELATVLHATTEAIKSSSWLQWDPLPHHRHAHMAAGCSNCLLLSDFGCNLPQPPPHPAN 234
           ARELA VL + + A+ S SWL W+P  HHRH       S C LLSDFGCN+P P  HPA+
Sbjct: 233 ARELAAVLSSASSAVSSRSWLTWNPHQHHRH----VTGSGCPLLSDFGCNVPAPEAHPAS 288

Query: 233 QFLTDWFGSKS--PGPGLRLCSHVGCGRPESRRHEFRRCSVCGDVNYCSRACQALDWRTR 60
           +FL +WF ++   PGPGLRLCSH GCGRPE RRHEFRRCSVCG VNYCSRACQALDW+ R
Sbjct: 289 RFLAEWFAARGGVPGPGLRLCSHAGCGRPEMRRHEFRRCSVCGIVNYCSRACQALDWKLR 348

Query: 59  HKAECTPAERW--DDGHDDGE 3
           HKA C P ERW  DDG  +GE
Sbjct: 349 HKAACAPVERWLVDDGDANGE 369


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  304 bits (778), Expect = 9e-81
 Identities = 144/200 (72%), Positives = 160/200 (80%), Gaps = 3/200 (1%)
 Frame = -1

Query: 593 FNGSGGSKTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVVEGRRFLVQAN 414
           FNGSGGSK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRRFLVQAN
Sbjct: 186 FNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRFLVQAN 245

Query: 413 ARELATVLHATTEAIKSSSWLQWDPLPHHRHAHMAA-GCSNCLLLSDFGCNLPQPPPHPA 237
           ARELA VL      + + +WL W+P  H  H H +  G S C LLSDFGCN+P P  HPA
Sbjct: 246 ARELAAVLSNPDSGLPTRAWLTWNPHAHPNHRHPSENGPSGCPLLSDFGCNVPAPEAHPA 305

Query: 236 NQFLTDWFGSK--SPGPGLRLCSHVGCGRPESRRHEFRRCSVCGDVNYCSRACQALDWRT 63
           ++F+T+WF  +  S G GLRLCSH GCGRPE+R+HEFRRCSVCG VNYCSRACQALDW+ 
Sbjct: 306 SRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKL 365

Query: 62  RHKAECTPAERWDDGHDDGE 3
           RHK EC P ERW D  +DGE
Sbjct: 366 RHKEECAPVERWVD--EDGE 383


>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
           gi|223545966|gb|EEF47469.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score =  303 bits (775), Expect = 2e-80
 Identities = 141/196 (71%), Positives = 157/196 (80%), Gaps = 4/196 (2%)
 Frame = -1

Query: 593 FNGSGGSKTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVVEGRRFLVQAN 414
           FNGSGGSK DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+ EGRRFLVQAN
Sbjct: 183 FNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRRFLVQAN 242

Query: 413 ARELATVLHATTEAIKSSSWLQWDPLPHHRHAHMAAGCSNCLLLSDFGCNLPQPPPHPAN 234
           ARELA VL      + + +W+ W+P  H  H H  A    C LLSDFGCN+P P  HPA+
Sbjct: 243 ARELAAVLSNPNSDLNTRAWVNWNPHAHSNHRH--ASGPGCPLLSDFGCNVPAPEAHPAS 300

Query: 233 QFLTDWFGSK--SPGPGLRLCSHVGCGRPESRRHEFRRCSVCGDVNYCSRACQALDWRTR 60
           +F+ DWF ++  SPG GLRLCSHVGCGRPE+R+HEFRRCSVCG VNYCSRACQALDW+ R
Sbjct: 301 RFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKLR 360

Query: 59  HKAECTPAERW--DDG 18
           HK EC P ERW  +DG
Sbjct: 361 HKEECAPVERWVVEDG 376


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
           gi|449494931|ref|XP_004159686.1| PREDICTED: F-box
           protein At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  300 bits (769), Expect = 9e-80
 Identities = 147/201 (73%), Positives = 159/201 (79%), Gaps = 5/201 (2%)
 Frame = -1

Query: 593 FNGSGGSKTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVVEGRRFLVQAN 414
           FNGSGGSK DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+ EGRRFLVQAN
Sbjct: 174 FNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLVQAN 233

Query: 413 ARELATVL--HATTEAIKSSSWLQWDPL-PHHRHAHMAAGCSNCLLLSDFGCNLPQPPPH 243
           ARELA VL   A +    S S L W+   PHHRH       S C LLSDFGCN+P P  H
Sbjct: 234 ARELAAVLSSEAASSVAASRSCLTWNTQPPHHRH----VTGSGCPLLSDFGCNIPAPEAH 289

Query: 242 PANQFLTDWFGSK--SPGPGLRLCSHVGCGRPESRRHEFRRCSVCGDVNYCSRACQALDW 69
           PA+QFL +WF ++  SPG GLRLCSHVGCGRPE+RRHEFRRCSVCG VNYCSRACQALDW
Sbjct: 290 PASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDW 349

Query: 68  RTRHKAECTPAERWDDGHDDG 6
           + RHK +C P ERW D + DG
Sbjct: 350 KLRHKIDCAPVERWLDDNGDG 370


>ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|222842112|gb|EEE79659.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  296 bits (759), Expect = 1e-78
 Identities = 141/200 (70%), Positives = 155/200 (77%), Gaps = 3/200 (1%)
 Frame = -1

Query: 593 FNGSGGSKTDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVVEGRRFLVQAN 414
           FNGSGGSK+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRRFLVQAN
Sbjct: 185 FNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRFLVQAN 244

Query: 413 ARELATVLHATTEAIKSSSWLQWDPLPHHRHAHMAA-GCSNCLLLSDFGCNLPQPPPHPA 237
           ARELA VL        + +W  W+P  H  H H    G S C LLSDFGCN+P P  HPA
Sbjct: 245 ARELAAVLSKHNSGFPTRTWFSWNPHAHPNHRHPTGNGPSGCPLLSDFGCNVPAPESHPA 304

Query: 236 NQFLTDWFGSK--SPGPGLRLCSHVGCGRPESRRHEFRRCSVCGDVNYCSRACQALDWRT 63
           ++F+T+WF  +  S G GLRLCSH GCGR E+R+HEFRRCSVCG VNYCSRACQALDW+ 
Sbjct: 305 SRFMTEWFAIRGGSSGSGLRLCSHTGCGRSETRKHEFRRCSVCGAVNYCSRACQALDWKL 364

Query: 62  RHKAECTPAERWDDGHDDGE 3
           RHK  C P ERW D  +DGE
Sbjct: 365 RHKEGCAPVERWVD--EDGE 382


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