BLASTX nr result

ID: Bupleurum21_contig00019629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019629
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...   107   3e-21
ref|XP_002511089.1| nucleotide binding protein, putative [Ricinu...   100   2e-19
ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-contain...   100   3e-19
ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...    99   1e-18
ref|XP_003602749.1| WD repeat-containing protein, putative [Medi...    97   3e-18

>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Glycine max]
          Length = 533

 Score =  107 bits (267), Expect = 3e-21
 Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 13/249 (5%)
 Frame = +1

Query: 22  DNG--VKRDEQEQVLLALIEHRTKEVERNKWRVSHYIAELENSERVLEETKNQLSRLRKQ 195
           +NG    R+EQE+ L+ALIEHRT EV+  + R+++Y  +L+ +E+ L++++++L+RLR  
Sbjct: 6   ENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLR-- 63

Query: 196 HSIFLSRXXXXXXXXXXXXXXXPTSPYGISQSRAILQPLQDNVKSSTKSEVDVKGVSNST 375
                                         Q+ +    L D +K+     +  +  SNS 
Sbjct: 64  -----------------------------GQTVSSRSTLDDGIKT-----LKTERRSNSP 89

Query: 376 ILQNGEGSSRNKTKPRTQIVIPAPNPVIPQ---LSKSHMGTQASNSSDLVPA-------- 522
           I +N EGS++N+ + + +++IP+ NP I Q   L KS      ++SS+  P         
Sbjct: 90  IDRN-EGSTKNRHQSKPELLIPSANPKISQPVLLPKSFSKASITSSSEATPGVHSSPITG 148

Query: 523 HAXXXXXXXXXXXXXXXEQESADMQSDGTKRKSEKKEHTDLIRLIGSSSSARSLHCQTGS 702
            +               EQ+  +++  GTKRK E+KEH +LI LI  SSS   + CQT +
Sbjct: 149 GSSRGKSDKSHSNRLSSEQQKTEVKEKGTKRKFEQKEHKELIPLIRKSSSPSLVTCQTSN 208

Query: 703 IMSSQHKRK 729
            +SSQHKRK
Sbjct: 209 HISSQHKRK 217


>ref|XP_002511089.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223550204|gb|EEF51691.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 752

 Score =  100 bits (250), Expect = 2e-19
 Identities = 75/238 (31%), Positives = 122/238 (51%), Gaps = 4/238 (1%)
 Frame = +1

Query: 28  GVKRDEQEQVLLALIEHRTKEVERNKWRVSHYIAELENSERVLEETKNQLSRLRKQHSIF 207
           G    EQE+ L+ALIEHR +EV+  K R+S+Y ++L+ +E  L +++++L+RLR Q    
Sbjct: 29  GTSLQEQEEALVALIEHRAREVDHLKRRISYYQSQLQETENKLHDSESRLARLRAQRIAP 88

Query: 208 LSRXXXXXXXXXXXXXXXPTSPYGISQSRAILQPLQDNVKSSTKSEVDVKGVSNSTILQN 387
            ++                 SP   ++S  ++ P+  N                      
Sbjct: 89  SAK----------------ASPGSGTKSVKVIAPININ---------------------- 110

Query: 388 GEGSSRNKTKPRTQIVIPAPNPVI--PQLSKSHMGTQAS--NSSDLVPAHAXXXXXXXXX 555
            EGSSR++ + +T+++IPA NP    P++S    GT+AS  +++   P+           
Sbjct: 111 -EGSSRSQPQAKTELLIPAINPKTFQPRISGG-FGTKASAVSTTQSSPSRHTNTVPKLKG 168

Query: 556 XXXXXXEQESADMQSDGTKRKSEKKEHTDLIRLIGSSSSARSLHCQTGSIMSSQHKRK 729
                   E A++++ GTKRK E+KEH +LI LI SSSS  ++ C   + +SSQHKRK
Sbjct: 169 EKNCRSSPE-AEVEARGTKRKLEQKEHKELIPLIRSSSSPSTIDCYASNNISSQHKRK 225


>ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera] gi|297734510|emb|CBI15757.3| unnamed
           protein product [Vitis vinifera]
          Length = 526

 Score =  100 bits (249), Expect = 3e-19
 Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
 Frame = +1

Query: 37  RDEQEQVLLALIEHRTKEVERNKWRVSHYIAELENSERVLEETKNQLSRLRKQHSIFLSR 216
           RDEQE+ L+ALIEHRTKEVE  + R+++Y ++L+ +E+ L +++ QL RLR + ++  SR
Sbjct: 25  RDEQEEALVALIEHRTKEVEHIRKRITYYQSQLQEAEKKLLDSQAQLGRLRSKDNLVSSR 84

Query: 217 XXXXXXXXXXXXXXXPTSPYGISQSRAILQPLQDNVKSSTKSEVDVKGVSNSTILQNGEG 396
                                         PL +  K     +V V+  S S +      
Sbjct: 85  -----------------------------SPLDNGTK-----KVKVERRSTSPL------ 104

Query: 397 SSRNKTKPRTQIVIPAPNPVIPQLSK-SHMGTQASNSSDLVPAHAXXXXXXXXXXXXXXX 573
               + + R +++IPA NP I Q  K +  GT+A + +   P HA               
Sbjct: 105 ----QLQSRPELLIPAVNPKISQPVKLADAGTRARSPT---PNHAHSVGKVKWEKSHGSS 157

Query: 574 -EQESADMQSDGTKRKSEKKEHTDLIRLIGSSSSARSLHCQTGSIMSSQHKRK 729
            E+E  ++Q  GTKRK E KEH +LI  I +SSS   + C + S +SSQHKRK
Sbjct: 158 SEREMVEVQDKGTKRKFEPKEHKELITSIATSSSPVIVRCYSSSHISSQHKRK 210


>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 72/249 (28%), Positives = 124/249 (49%), Gaps = 13/249 (5%)
 Frame = +1

Query: 22  DNG--VKRDEQEQVLLALIEHRTKEVERNKWRVSHYIAELENSERVLEETKNQLSRLRKQ 195
           +NG    R+EQE+ L+ALIEHRT EV+  + R+++Y  +L+ +E+ L++++++L+RLR Q
Sbjct: 6   ENGGSTSREEQEEALVALIEHRTHEVKNLRHRIAYYKTQLDEAEKRLQDSESKLARLRGQ 65

Query: 196 HSIFLSRXXXXXXXXXXXXXXXPTSPYGISQSRAILQPLQDNVKSSTKSEVDVKGVSNST 375
                                          SR+ L    + +K+ ++S         S+
Sbjct: 66  ----------------------------TVSSRSTLDDGIETLKTKSRS---------SS 88

Query: 376 ILQNGEGSSRNKTKPRTQIVIPAPNPVIPQ---LSKSHMGTQASNSSDLVPA-------- 522
            +   E S++++ + + +++IP+ NP I Q   L KS      ++SS+  P         
Sbjct: 89  PIDRNEVSTKSQHQSKPELLIPSLNPKISQPVLLPKSSSKASITSSSEATPGVHNSPITG 148

Query: 523 HAXXXXXXXXXXXXXXXEQESADMQSDGTKRKSEKKEHTDLIRLIGSSSSARSLHCQTGS 702
            +               EQ+  +++  GTKRK E+K H +LI L+  SSS   + CQT +
Sbjct: 149 GSSRGKSDKSQSNRLSSEQQKTEVKEKGTKRKFEQKGHKELIPLVRKSSSPSLVTCQTSN 208

Query: 703 IMSSQHKRK 729
            +SSQHKRK
Sbjct: 209 HISSQHKRK 217


>ref|XP_003602749.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355491797|gb|AES73000.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 517

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 72/231 (31%), Positives = 121/231 (52%)
 Frame = +1

Query: 37  RDEQEQVLLALIEHRTKEVERNKWRVSHYIAELENSERVLEETKNQLSRLRKQHSIFLSR 216
           R+EQE+ L+ALIEHRT+EV   + R+++   +L+++E+ L++++++L+RLR Q       
Sbjct: 11  REEQEEALVALIEHRTREVNNLRHRLAYTKNQLDDAEKRLKDSESKLARLRGQ------- 63

Query: 217 XXXXXXXXXXXXXXXPTSPYGISQSRAILQPLQDNVKSSTKSEVDVKGVSNSTILQNGEG 396
                                   ++ I     DN   + K E      SNS I +N E 
Sbjct: 64  -----------------------TTKKITNSDDDNGTVAVKKERR----SNSPIDRN-ER 95

Query: 397 SSRNKTKPRTQIVIPAPNPVIPQLSKSHMGTQASNSSDLVPAHAXXXXXXXXXXXXXXXE 576
           S ++  + +T++VIPA   V P++S+S   +   + S++  +                 +
Sbjct: 96  SYKSNKQSKTELVIPA---VTPKISRS---SGKGSVSEVAVSSVHTSSVSGGKSVKSKID 149

Query: 577 QESADMQSDGTKRKSEKKEHTDLIRLIGSSSSARSLHCQTGSIMSSQHKRK 729
           Q++ + +  GTKRK E+KEH +LI LI  SSS   +HCQ+ + +SSQHKRK
Sbjct: 150 QQNVEGKDKGTKRKFEQKEHQELIPLIRKSSSKNLVHCQSSNHISSQHKRK 200


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