BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019615
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   113   2e-39
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    98   3e-30
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    97   2e-29
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    80   2e-25
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    95   5e-23

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  113 bits (283), Expect(2) = 2e-39
 Identities = 53/134 (39%), Positives = 75/134 (55%)
 Frame = -3

Query: 843 DVDIVRDVFNERDQDCILKIPLSADNTEDVMFWNLEDSGNYSVKSTYRLLQTQRGAWRLE 664
           D DI+ D+FN RD+  I  IPL+  N ED  +W  +D GNY VK+ YRLLQ   G     
Sbjct: 367 DGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLG----R 422

Query: 663 NNENIWRLLWKIKAPSKATNLVWWALSGCLPTLTQLQAKHVTVQVGCPLCGEGPETIAHI 484
              + W   WK+K P+K  NL+W   S C+ T   L+ ++V +   C  C   PET+ H+
Sbjct: 423 PETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHV 482

Query: 483 LVNCAFASQCWGMM 442
           L  C+ A +CW ++
Sbjct: 483 LFGCSMARECWDLL 496



 Score = 75.5 bits (184), Expect(2) = 2e-39
 Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
 Frame = -2

Query: 391 WFANVLKSSNKDRRAEIVTLCWMIWRARNDWVWNKKYSTVNKVVAETKQYLIQWKAAQG- 215
           W  N    +++D  A++  +C  +W  RN WVWNK+ +T   V++   Q L Q   AQ  
Sbjct: 511 WIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSA 570

Query: 214 -RSFVAPLQPTIEGDGASNWVKPQTNIIKVSVDAAIFEDREEVGIGLIARDEEGQLVLA 41
                 PL      D    W KP+   +K++ D A+F  +  +G+G + RD  G++++A
Sbjct: 571 DEEIAPPLGHNT--DVTRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMA 627


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 98.2 bits (243), Expect(2) = 3e-30
 Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
 Frame = -3

Query: 837 DIVRDVFNERDQDCILKIPLSADNTEDVMFWNLEDSGNYSVKSTYRLLQTQRGAWRLE-- 664
           D +RD F  RD D IL IPL   + ED + W+ +  G Y+ +S Y  L+  R +  L   
Sbjct: 441 DFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVAS 500

Query: 663 --NNENIWRLLWKIKAPSKATNLVWWALSGCLPTLTQLQAKHVTVQVGCPLCGEGPETIA 490
             ++  +W  LWK+ AP K  N  W A   CLPT   L  +HV   + CP+C    ET  
Sbjct: 501 DVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTL 560

Query: 489 HILVNCAFASQCW 451
           H LV C  A   W
Sbjct: 561 HALVECVAARDVW 573



 Score = 60.5 bits (145), Expect(2) = 3e-30
 Identities = 38/125 (30%), Positives = 56/125 (44%)
 Frame = -2

Query: 421 LHNEIMEFPDWFANVLKSSNKDRRAEIVTLCWMIWRARNDWVWNKKYSTVNKVVAETKQY 242
           L      F DW A +    +    A+ + +CW +W  RND VWN +     +VV      
Sbjct: 581 LQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTM 640

Query: 241 LIQWKAAQGRSFVAPLQPTIEGDGASNWVKPQTNIIKVSVDAAIFEDREEVGIGLIARDE 62
           L  W  A      A   P+     +S W KP    IK++VD A+F D+    IG + RD 
Sbjct: 641 LESWFHANETLATAVTVPSY----SSKWQKPDYGWIKINVDGAVFPDKG--AIGAVFRDH 694

Query: 61  EGQLV 47
           +G+ +
Sbjct: 695 QGRFM 699


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 97.4 bits (241), Expect(2) = 2e-29
 Identities = 52/135 (38%), Positives = 71/135 (52%)
 Frame = -3

Query: 843 DVDIVRDVFNERDQDCILKIPLSADNTEDVMFWNLEDSGNYSVKSTYRLLQTQRGAWRLE 664
           D +I+ D+F+ERD++ I  I LS     D +FW  +  G +SVK  YR+ Q         
Sbjct: 120 DQEILNDLFSERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSVKDVYRVQQPDFSVL-YP 178

Query: 663 NNENIWRLLWKIKAPSKATNLVWWALSGCLPTLTQLQAKHVTVQVGCPLCGEGPETIAHI 484
           +N  +WR LWK+   +K    +W AL+  LP  T L  + VT    CP C   PETI HI
Sbjct: 179 SNVVVWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHI 238

Query: 483 LVNCAFASQCWGMMN 439
           LV C   +Q W  +N
Sbjct: 239 LVLCDVTTQSWKYVN 253



 Score = 58.5 bits (140), Expect(2) = 2e-29
 Identities = 34/114 (29%), Positives = 51/114 (44%)
 Frame = -2

Query: 349 AEIVTLCWMIWRARNDWVWNKKYSTVNKVVAETKQYLIQWKAAQGRSFVAPLQPTIEGDG 170
           A  V L W +W   ND VWN K  +   V +    +L QW  A+  +    L     G G
Sbjct: 281 ASFVVLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAG-G 339

Query: 169 ASNWVKPQTNIIKVSVDAAIFEDREEVGIGLIARDEEGQLVLAMAMVVQGLVNP 8
              W KP T   K++VDA+   +R + G   + RD  G  +  + ++   + NP
Sbjct: 340 DCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANP 393


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 79.7 bits (195), Expect(2) = 2e-25
 Identities = 39/128 (30%), Positives = 55/128 (42%)
 Frame = -3

Query: 834 IVRDVFNERDQDCILKIPLSADNTEDVMFWNLEDSGNYSVKSTYRLLQTQRGAWRLENNE 655
           IV  +FN +D   IL IPL      D   W    +GNY+VKS YR+           +N 
Sbjct: 53  IVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPHDSAHNN 112

Query: 654 NIWRLLWKIKAPSKATNLVWWALSGCLPTLTQLQAKHVTVQVGCPLCGEGPETIAHILVN 475
           + W  +W +  P +    +W     CLPT   L A+ +  +  C +     E   H+   
Sbjct: 113 SSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFFV 172

Query: 474 CAFASQCW 451
           CA A  CW
Sbjct: 173 CAKAMDCW 180



 Score = 62.8 bits (151), Expect(2) = 2e-25
 Identities = 32/103 (31%), Positives = 55/103 (53%)
 Frame = -2

Query: 334 LCWMIWRARNDWVWNKKYSTVNKVVAETKQYLIQWKAAQGRSFVAPLQPTIEGDGASNWV 155
           L W +W++RN  +W+   +T    ++  K  L +W   Q     A  QP I  +   +WV
Sbjct: 221 LLWSLWKSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQS----AKTQP-INPNHHISWV 275

Query: 154 KPQTNIIKVSVDAAIFEDREEVGIGLIARDEEGQLVLAMAMVV 26
           KP   +IK ++DAAIF++    G G+  R+ E +L+L  + ++
Sbjct: 276 KPTGGMIKCNMDAAIFQNNVAAGYGICCRNSEDELLLGKSAII 318


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 95.1 bits (235), Expect(2) = 5e-23
 Identities = 45/136 (33%), Positives = 68/136 (50%)
 Frame = -3

Query: 843  DVDIVRDVFNERDQDCILKIPLSADNTEDVMFWNLEDSGNYSVKSTYRLLQTQRGAWRLE 664
            +V+++   FNERDQ CIL IPLS    +D + W     G YSVK+ Y L +       L+
Sbjct: 978  NVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYMLGK----GGNLD 1033

Query: 663  NNENIWRLLWKIKAPSKATNLVWWALSGCLPTLTQLQAKHVTVQVGCPLCGEGPETIAHI 484
            +   +W +LW +    K  + +W A +  LP    LQ +H+  + GCP C    ET  H+
Sbjct: 1034 DFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHL 1093

Query: 483  LVNCAFASQCWGMMNS 436
               C  + + W  + S
Sbjct: 1094 FYRCPMSLKLWEELGS 1109



 Score = 39.3 bits (90), Expect(2) = 5e-23
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
 Frame = -2

Query: 334  LCWMIWRARNDWVWNKKYSTVNKV-------VAETKQYLIQWKAAQGRSFVAPLQPTIEG 176
            + W +W  RN  V+         V       V +   Y +  K   G    A L P    
Sbjct: 1142 ILWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDFNNYAV--KIYGGMRSSAALSP---- 1195

Query: 175  DGASNWVKPQTNIIKVSVDAAIFEDREEVGIGLIARDEEGQLVLAMAMVVQGLVNP 8
               S W  P    IK++ DA++ E+   VG+G+IARD EG++  A    V+    P
Sbjct: 1196 ---SRWYAPPVGAIKLNTDASLAEEGW-VGLGVIARDSEGKVCFAATRRVRAYWPP 1247