BLASTX nr result

ID: Bupleurum21_contig00019583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019583
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45081.1| putative polyprotein [Solanum habrochaites]            208   5e-52
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   207   9e-52
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   207   1e-51
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   206   2e-51
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   204   6e-51

>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score =  208 bits (529), Expect = 5e-52
 Identities = 102/171 (59%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
 Frame = +2

Query: 59  YACPVSVDKVVSEPSSYKQATLDPRWVDAMNKEMSALESNNTWTVMPLPPGKKVIGCKWV 238
           Y C ++   V +EP  Y QA  D RW+ AM +E+ ALE N TW V+ LP GKK IGCKWV
Sbjct: 320 YQCCIANLSVDTEPKFYHQAAKDKRWIAAMKEEIQALEENKTWEVVTLPIGKKAIGCKWV 379

Query: 239 FKVKYLANGDIDKFKARLVAKGYTQTFGEDYHHTFAPVAKMPTVRTLLALVATKSWDVHQ 418
           +K+KY ANG++++FKARLVAKGY+Q  G DY  TF+PV KM TVRT+L L A+K WDV Q
Sbjct: 380 YKIKYKANGEVERFKARLVAKGYSQQEGLDYQDTFSPVVKMVTVRTVLTLAASKGWDVQQ 439

Query: 419 LDINNAFLHGDLHEEVYMDLPQG--HPLFG-TAVCKLNKSIYGLKQAAREW 562
           +D+ NAFL GDL EEVYM +PQG  H   G   VCKL KS+YGLKQA+R+W
Sbjct: 440 MDVYNAFLQGDLVEEVYMQIPQGFSHVHAGDQPVCKLLKSLYGLKQASRQW 490


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  207 bits (527), Expect = 9e-52
 Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 2/183 (1%)
 Frame = +2

Query: 20   NFQHYTSPSF-QSVYACPVSVDKVVSEPSSYKQATLDPRWVDAMNKEMSALESNNTWTVM 196
            N+  YT  S     +   ++++K   EP +YK+A  D RW +AM KE+ ALE+N TW V+
Sbjct: 783  NYVTYTKFSVGHRAFLAXINIEK---EPRTYKEAVXDNRWREAMAKEIEALETNQTWKVV 839

Query: 197  PLPPGKKVIGCKWVFKVKYLANGDIDKFKARLVAKGYTQTFGEDYHHTFAPVAKMPTVRT 376
             LPP KK IGCKW++K+KY A+G I+++KARLVA+G+TQ  G DY   F+PVAKM +VR 
Sbjct: 840  DLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRC 899

Query: 377  LLALVATKSWDVHQLDINNAFLHGDLHEEVYMDLPQGHPLFG-TAVCKLNKSIYGLKQAA 553
             LA+   K W++HQ+D+NNAFLHGDL EEVYM LP+G    G   VCKL KS+YGLKQA+
Sbjct: 900  FLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQAS 959

Query: 554  REW 562
            R+W
Sbjct: 960  RQW 962


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  207 bits (526), Expect = 1e-51
 Identities = 97/177 (54%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
 Frame = +2

Query: 38   SPSFQSVYACPVSVDKVVSEPSSYKQATLDPRWVDAMNKEMSALESNNTWTVMPLPPGKK 217
            SP +++ + C ++    + EP++Y+QA LDP+W +AM  E+ ALE N+TWT+ PLP G +
Sbjct: 935  SPKYRN-FVCAITT---LVEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHR 990

Query: 218  VIGCKWVFKVKYLANGDIDKFKARLVAKGYTQTFGEDYHHTFAPVAKMPTVRTLLALVAT 397
             IGCKWV+K+KY ++G ++++KARLVAKG+TQ  G DY  TF+PVAK+ TVR LLA+ A 
Sbjct: 991  PIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAV 1050

Query: 398  KSWDVHQLDINNAFLHGDLHEEVYMDLPQGHPLFGTA--VCKLNKSIYGLKQAAREW 562
            + W +HQ+D+ NAFLHGDL EEVYM LP G    G    VC+LNKS+YGLKQA+R W
Sbjct: 1051 RHWSLHQMDVQNAFLHGDLLEEVYMQLPLGFRQQGETPMVCRLNKSLYGLKQASRSW 1107


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  206 bits (525), Expect = 2e-51
 Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
 Frame = +2

Query: 38   SPSFQSVYACPVSVDKVVSEPSSYKQATLDPRWVDAMNKEMSALESNNTWTVMPLPPGKK 217
            SP +++ + C ++    + EP++Y+QA LDP+W +AM  E+ ALE N+TWT+ PLP G +
Sbjct: 527  SPKYRN-FVCAITT---LVEPTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPSGHR 582

Query: 218  VIGCKWVFKVKYLANGDIDKFKARLVAKGYTQTFGEDYHHTFAPVAKMPTVRTLLALVAT 397
             IGCKWV+K+KY ++G ++++KARLVAKG+TQ  G DY  TF+PVAK+ TVR LLA+ A 
Sbjct: 583  PIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAV 642

Query: 398  KSWDVHQLDINNAFLHGDLHEEVYMDLPQGHPLFGTA--VCKLNKSIYGLKQAAREW 562
            + W +HQ+D+ NAFLHGDL EEVYM LP G    G    VC+ NKS+YGLKQA+R W
Sbjct: 643  RHWSLHQMDVQNAFLHGDLLEEVYMQLPPGFXRQGETPMVCRXNKSLYGLKQASRSW 699


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  204 bits (520), Expect = 6e-51
 Identities = 94/158 (59%), Positives = 122/158 (77%), Gaps = 1/158 (0%)
 Frame = +2

Query: 92   SEPSSYKQATLDPRWVDAMNKEMSALESNNTWTVMPLPPGKKVIGCKWVFKVKYLANGDI 271
            +EPSS++QA  DPRW  AM+ E+ ALE NNTW ++PLPPG K IGC+WV+K+KY ++G I
Sbjct: 1218 TEPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDGTI 1277

Query: 272  DKFKARLVAKGYTQTFGEDYHHTFAPVAKMPTVRTLLALVATKSWDVHQLDINNAFLHGD 451
            +++KARLVAKGYTQ  G DY  TF+P AK+ T+R LL + A+++W +HQLD++NAFLHG+
Sbjct: 1278 ERYKARLVAKGYTQVAGIDYQETFSPTAKLTTLRCLLTVAASRNWYIHQLDVHNAFLHGN 1337

Query: 452  LHEEVYMDLPQGHPLFG-TAVCKLNKSIYGLKQAAREW 562
            L EEVYM  P G    G   VC+L KSIYGLKQA+R W
Sbjct: 1338 LQEEVYMTPPPGLRRQGENLVCRLRKSIYGLKQASRNW 1375


Top