BLASTX nr result

ID: Bupleurum21_contig00019577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019577
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326707.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002279231.1| PREDICTED: uncharacterized protein LOC100257...   108   6e-22
ref|XP_003543156.1| PREDICTED: uncharacterized protein LOC100819...   106   2e-21
gb|AFK40660.1| unknown [Medicago truncatula]                          105   4e-21
ref|XP_003596213.1| Tobamovirus multiplication 2B [Medicago trun...   105   4e-21

>ref|XP_002326707.1| predicted protein [Populus trichocarpa] gi|222834029|gb|EEE72506.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/98 (63%), Positives = 72/98 (73%)
 Frame = +3

Query: 189 SSSSREGSAKSMVTDQISQSVXXXXXXXXXXXXXXXXXAHLMKLPRNLLAKTSTIKNTEQ 368
           S+S+REG+AKS+V DQISQ+V                 A LMKLP+NLLAK STIKNT Q
Sbjct: 14  SASAREGTAKSVVADQISQAVQSTSNLLHLMQQSSPSQAKLMKLPKNLLAKASTIKNTGQ 73

Query: 369 VLEQLPRVISSLDAHMDNGLQSVLHLETVTQLLENMES 482
           VL+Q+P+VISSLDAHMD+GLQSV HL T  QLL NMES
Sbjct: 74  VLDQMPKVISSLDAHMDSGLQSVPHLRTAIQLLANMES 111


>ref|XP_002279231.1| PREDICTED: uncharacterized protein LOC100257452 [Vitis vinifera]
          Length = 173

 Score =  108 bits (269), Expect = 6e-22
 Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
 Frame = +3

Query: 159 SKMATAPAPVSSSSREGSA-----KSMVTDQISQSVXXXXXXXXXXXXXXXXXAHLMKLP 323
           S+ +T P   S+S+  GSA     K+ + DQISQSV                 A L KLP
Sbjct: 5   SRSSTTPTGGSASAGRGSARESTVKATMADQISQSVQSTSNLLHLMQQSSPSHAQLTKLP 64

Query: 324 RNLLAKTSTIKNTEQVLEQLPRVISSLDAHMDNGLQSVLHLETVTQLLENMES 482
           +NLLAKTSTIKNT Q+LEQ+PRVISSLDAH+++GLQSV HL+TV QLL NMES
Sbjct: 65  KNLLAKTSTIKNTGQLLEQMPRVISSLDAHIESGLQSVPHLKTVIQLLANMES 117


>ref|XP_003543156.1| PREDICTED: uncharacterized protein LOC100819701 [Glycine max]
          Length = 130

 Score =  106 bits (265), Expect = 2e-21
 Identities = 58/98 (59%), Positives = 69/98 (70%)
 Frame = +3

Query: 189 SSSSREGSAKSMVTDQISQSVXXXXXXXXXXXXXXXXXAHLMKLPRNLLAKTSTIKNTEQ 368
           S+    G+AK+ V +QISQ+V                 A L+KLP+NLLAK STIKNTEQ
Sbjct: 7   SAGGGGGTAKATVAEQISQAVQSTSNLLHLMRHSSPAQAQLVKLPKNLLAKVSTIKNTEQ 66

Query: 369 VLEQLPRVISSLDAHMDNGLQSVLHLETVTQLLENMES 482
           VLEQLP VISSLDAHM+NGLQ+V HL+TV Q+L NMES
Sbjct: 67  VLEQLPGVISSLDAHMENGLQNVPHLKTVVQVLSNMES 104


>gb|AFK40660.1| unknown [Medicago truncatula]
          Length = 129

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = +3

Query: 189 SSSSREGSAKSMVTDQISQSVXXXXXXXXXXXXXXXXXAHLMKLPRNLLAKTSTIKNTEQ 368
           +++  + SAK++V +QISQ+V                 A L+KLP+NLLAK ST+KNT+Q
Sbjct: 6   AATGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQ 65

Query: 369 VLEQLPRVISSLDAHMDNGLQSVLHLETVTQLLENMES 482
           VLEQLPRVISSLDAHM+NGLQ+V  L+TV QLL NMES
Sbjct: 66  VLEQLPRVISSLDAHMENGLQNVPQLKTVVQLLANMES 103


>ref|XP_003596213.1| Tobamovirus multiplication 2B [Medicago truncatula]
           gi|355485261|gb|AES66464.1| Tobamovirus multiplication
           2B [Medicago truncatula]
          Length = 150

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = +3

Query: 189 SSSSREGSAKSMVTDQISQSVXXXXXXXXXXXXXXXXXAHLMKLPRNLLAKTSTIKNTEQ 368
           +++  + SAK++V +QISQ+V                 A L+KLP+NLLAK ST+KNT+Q
Sbjct: 27  AATGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQ 86

Query: 369 VLEQLPRVISSLDAHMDNGLQSVLHLETVTQLLENMES 482
           VLEQLPRVISSLDAHM+NGLQ+V  L+TV QLL NMES
Sbjct: 87  VLEQLPRVISSLDAHMENGLQNVPQLKTVVQLLANMES 124


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