BLASTX nr result

ID: Bupleurum21_contig00019573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019573
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234731.1| 5-formyltetrahydrofolate cycloligase [Solanu...   194   1e-47
ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Popul...   192   5e-47
ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   186   3e-45
ref|XP_002511485.1| 5-formyltetrahydrofolate cyclo-ligase, putat...   186   4e-45
emb|CAN75382.1| hypothetical protein VITISV_027597 [Vitis vinifera]   185   6e-45

>ref|NP_001234731.1| 5-formyltetrahydrofolate cycloligase [Solanum lycopersicum]
           gi|22087556|gb|AAM90961.1|AF516366_1
           5-formyltetrahydrofolate cycloligase [Solanum
           lycopersicum]
          Length = 273

 Score =  194 bits (493), Expect = 1e-47
 Identities = 103/172 (59%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
 Frame = +1

Query: 124 AYSLDTS-FTPSLIVRLPRRSFCCSPPPHSAAMAAGNKSSDDCVDSDNLFKQKQVLRNKV 300
           A SL TS F P+    L R++  CS    +    AG +++ D    D +FKQK+ LR  V
Sbjct: 6   AVSLSTSRFFPTRSAILRRQTSPCSAT--ATMSTAGEQNTSDTAHLDTIFKQKKALRLVV 63

Query: 301 KKDLKAMDPALRSEEDNAIQSIVLEAPWFRSCKRLCAYISCGALREVDTSKVLAYILHNA 480
           K+DLK+MDP LRSEED AIQ IV+EAPWF++CK LCAYISC ALREVDTS++L++IL + 
Sbjct: 64  KRDLKSMDPTLRSEEDEAIQRIVMEAPWFKACKGLCAYISCSALREVDTSRILSHILSSH 123

Query: 481 TKDGKKLYVPRVEDKNRHMRMLNISSVDDLIPSSMNILEPDPNDAGGNERED 636
           ++  KKL+VPRVED+NR+MRMLNISS +DLI +SMNILEP P DA GNERED
Sbjct: 124 SEMRKKLFVPRVEDRNRNMRMLNISSTEDLIANSMNILEPAPLDAEGNERED 175


>ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Populus trichocarpa]
           gi|222859293|gb|EEE96840.1| 5-formyltetrahydrofolate
           cyclo-ligase [Populus trichocarpa]
          Length = 276

 Score =  192 bits (488), Expect = 5e-47
 Identities = 105/170 (61%), Positives = 125/170 (73%), Gaps = 5/170 (2%)
 Frame = +1

Query: 142 SFTPSLIVRLPRRSFCCSPPPHSAAMAAGNKSSDDCVDSDNLFKQKQVLRNKVKKDLKAM 321
           +FT   ++ L   S C SP   S A            + D +FKQKQVLR+KV+K LK+M
Sbjct: 20  AFTKKPLLGLANASLC-SPGTMSTA-----------TNLDGIFKQKQVLRSKVRKSLKSM 67

Query: 322 DPALRSEEDNAIQSIVLEAPWFRSCKRLCAYISCGALREVDTSKVLAYILHNATKDG--- 492
           DP+LRS+ED+AIQS+VLEAPWF+S +RLCAYI+C ALREVDTSK+L+ IL N TKDG   
Sbjct: 68  DPSLRSQEDDAIQSLVLEAPWFKSSQRLCAYITCSALREVDTSKLLSQILQNPTKDGSVE 127

Query: 493 --KKLYVPRVEDKNRHMRMLNISSVDDLIPSSMNILEPDPNDAGGNERED 636
             KKLYVPRVEDKN HMRMLNISS+DDLI +SM+ILEP P D  GN RED
Sbjct: 128 NAKKLYVPRVEDKNSHMRMLNISSMDDLIANSMDILEPAPVDQHGNARED 177


>ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase [Vitis vinifera]
          Length = 273

 Score =  186 bits (473), Expect = 3e-45
 Identities = 98/170 (57%), Positives = 118/170 (69%), Gaps = 9/170 (5%)
 Frame = +1

Query: 154 SLIVRLPRRSFCCS----PPPHSAAMAAGNKSSDDCVDSDNLFKQKQVLRNKVKKDLKAM 321
           S+   L +  FC      P P S      N         + +FKQK++LR+ V+K LK M
Sbjct: 6   SIATVLAQAPFCSLFNPLPAPRSIVTMTNNTHQSSNTHLEAVFKQKKILRSSVRKALKGM 65

Query: 322 DPALRSEEDNAIQSIVLEAPWFRSCKRLCAYISCGALREVDTSKVLAYILHNATKD---- 489
           DP+ RS+EDNA+Q+I+LEAPWFRS +RLCAYISC +LREVDTSKVL+ IL N  KD    
Sbjct: 66  DPSSRSQEDNAVQNIILEAPWFRSSQRLCAYISCSSLREVDTSKVLSEILQNPAKDGHTQ 125

Query: 490 -GKKLYVPRVEDKNRHMRMLNISSVDDLIPSSMNILEPDPNDAGGNERED 636
            GKKLYVPRVEDKN +MRMLNI+ +DDLI +SMNILEP P D  GNERED
Sbjct: 126 MGKKLYVPRVEDKNSYMRMLNITHMDDLISNSMNILEPAPVDGDGNERED 175


>ref|XP_002511485.1| 5-formyltetrahydrofolate cyclo-ligase, putative [Ricinus communis]
           gi|223550600|gb|EEF52087.1| 5-formyltetrahydrofolate
           cyclo-ligase, putative [Ricinus communis]
          Length = 292

 Score =  186 bits (471), Expect = 4e-45
 Identities = 97/152 (63%), Positives = 114/152 (75%), Gaps = 5/152 (3%)
 Frame = +1

Query: 196 PPPHSAAMAAGNKSSDDCVDSDNLFKQKQVLRNKVKKDLKAMDPALRSEEDNAIQSIVLE 375
           PP      A  + +     + D +FKQK++LR+KV+K LK+MDP+LRSEEDNAIQS+VLE
Sbjct: 27  PPSLLRPTATMSIAQHQTANFDEIFKQKRILRSKVRKSLKSMDPSLRSEEDNAIQSLVLE 86

Query: 376 APWFRSCKRLCAYISCGALREVDTSKVLAYILHNATKDG-----KKLYVPRVEDKNRHMR 540
           APWF+S K  CAYISC ALREV+TS +L  IL N  KDG     KKLYVPRVEDKN HMR
Sbjct: 87  APWFKSSKTFCAYISCSALREVNTSVLLREILKNPEKDGCAQTPKKLYVPRVEDKNSHMR 146

Query: 541 MLNISSVDDLIPSSMNILEPDPNDAGGNERED 636
           MLNISS+DDLI +SMNILEP P D  GN+RED
Sbjct: 147 MLNISSMDDLIANSMNILEPAPIDGLGNKRED 178


>emb|CAN75382.1| hypothetical protein VITISV_027597 [Vitis vinifera]
          Length = 522

 Score =  185 bits (470), Expect = 6e-45
 Identities = 98/170 (57%), Positives = 118/170 (69%), Gaps = 9/170 (5%)
 Frame = +1

Query: 154 SLIVRLPRRSFCCS----PPPHSAAMAAGNKSSDDCVDSDNLFKQKQVLRNKVKKDLKAM 321
           S+   L +  FC      P P S      N         + +FKQK++LR+ V+K LK M
Sbjct: 20  SIATVLAQAPFCSLFNPLPAPCSIVTMTNNTHQSSNTHLEAVFKQKKILRSSVRKALKGM 79

Query: 322 DPALRSEEDNAIQSIVLEAPWFRSCKRLCAYISCGALREVDTSKVLAYILHNATKD---- 489
           DP+ RS+EDNA+Q+I+LEAPWFRS +RLCAYISC +LREVDTSKVL+ IL N  KD    
Sbjct: 80  DPSSRSQEDNAVQNIILEAPWFRSSQRLCAYISCSSLREVDTSKVLSEILQNPAKDGHTQ 139

Query: 490 -GKKLYVPRVEDKNRHMRMLNISSVDDLIPSSMNILEPDPNDAGGNERED 636
            GKKLYVPRVEDKN +MRMLNI+ +DDLI +SMNILEP P D  GNERED
Sbjct: 140 MGKKLYVPRVEDKNSYMRMLNITHMDDLISNSMNILEPAPVDGDGNERED 189


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