BLASTX nr result

ID: Bupleurum21_contig00019564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019564
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274106.1| PREDICTED: transmembrane protein 222-like [V...   147   7e-34
ref|XP_004146489.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumi...   147   9e-34
ref|XP_002534132.1| conserved hypothetical protein [Ricinus comm...   141   6e-32
gb|ADI88503.1| RTE1/GR-like protein [Rosa hybrid cultivar]            140   8e-32
ref|NP_001233909.1| green ripe-like 2 [Solanum lycopersicum] gi|...   139   3e-31

>ref|XP_002274106.1| PREDICTED: transmembrane protein 222-like [Vitis vinifera]
          Length = 231

 Score =  147 bits (372), Expect = 7e-34
 Identities = 63/89 (70%), Positives = 75/89 (84%)
 Frame = +2

Query: 119 DPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDFA 298
           DPE  +M+E S    +QIDP R+RFP CIVWTP+PV+SW IPF+GH+G+CREDGVILDFA
Sbjct: 6   DPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGVILDFA 65

Query: 299 GPNFVCVDNFTFGAVARYIRIDEGKCCVS 385
           GPNFVCVDNF FGAV RYI+I + KCC+S
Sbjct: 66  GPNFVCVDNFAFGAVTRYIQISKEKCCIS 94


>ref|XP_004146489.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumis sativus]
           gi|449500005|ref|XP_004160976.1| PREDICTED: protein
           RTE1-HOMOLOG-like [Cucumis sativus]
          Length = 230

 Score =  147 bits (371), Expect = 9e-34
 Identities = 63/91 (69%), Positives = 80/91 (87%)
 Frame = +2

Query: 116 EDPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDF 295
           +DPE+ LM+E +    ++IDPER+RFP CIVWTP+PV+SW +PFIGH+G+ REDGVILDF
Sbjct: 9   KDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDF 68

Query: 296 AGPNFVCVDNFTFGAVARYIRIDEGKCCVSS 388
           AGPNFVCVDNFTFGAVARY++I+  KCC+S+
Sbjct: 69  AGPNFVCVDNFTFGAVARYLQINRDKCCISA 99


>ref|XP_002534132.1| conserved hypothetical protein [Ricinus communis]
           gi|223525804|gb|EEF28249.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 225

 Score =  141 bits (355), Expect = 6e-32
 Identities = 61/90 (67%), Positives = 76/90 (84%)
 Frame = +2

Query: 110 EHEDPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVIL 289
           E+ DPE  +M E +    +QIDP+R+RFP CIVWTP+PV+SW IPFIGH+G+CREDGVIL
Sbjct: 3   ENVDPERQMMFEENFQQSMQIDPKRARFPCCIVWTPLPVISWLIPFIGHIGICREDGVIL 62

Query: 290 DFAGPNFVCVDNFTFGAVARYIRIDEGKCC 379
           DFAGPNFVCVDNF FGAV+R+I+I++ K C
Sbjct: 63  DFAGPNFVCVDNFAFGAVSRFIQINKEKDC 92


>gb|ADI88503.1| RTE1/GR-like protein [Rosa hybrid cultivar]
          Length = 227

 Score =  140 bits (354), Expect = 8e-32
 Identities = 60/87 (68%), Positives = 74/87 (85%)
 Frame = +2

Query: 119 DPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDFA 298
           D EH +M++ S+ P LQIDP+R+RFP CIVWTP+PV+SW IPF+GH+G+CREDGVILDFA
Sbjct: 6   DSEHHMMIDGSALPTLQIDPKRARFPCCIVWTPLPVISWLIPFVGHIGICREDGVILDFA 65

Query: 299 GPNFVCVDNFTFGAVARYIRIDEGKCC 379
           GPNFV VD+F FGA  RYI+I + KCC
Sbjct: 66  GPNFVSVDDFAFGAPTRYIQISKEKCC 92


>ref|NP_001233909.1| green ripe-like 2 [Solanum lycopersicum] gi|87244451|gb|ABD34617.1|
           green ripe-like 2 [Solanum lycopersicum]
          Length = 231

 Score =  139 bits (349), Expect = 3e-31
 Identities = 60/90 (66%), Positives = 72/90 (80%)
 Frame = +2

Query: 119 DPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDFA 298
           D +H LM+E + P P+ IDP+R RFP CIVW+P+PVLSWFIPFIGH+G+CREDGVILDFA
Sbjct: 6   DADHALMIEENYPNPMLIDPKRDRFPCCIVWSPLPVLSWFIPFIGHIGICREDGVILDFA 65

Query: 299 GPNFVCVDNFTFGAVARYIRIDEGKCCVSS 388
           GPNFV VDNFTFGA   Y ++   +CC  S
Sbjct: 66  GPNFVSVDNFTFGAPTCYFQLSREQCCCLS 95


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