BLASTX nr result
ID: Bupleurum21_contig00019564
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00019564 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274106.1| PREDICTED: transmembrane protein 222-like [V... 147 7e-34 ref|XP_004146489.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumi... 147 9e-34 ref|XP_002534132.1| conserved hypothetical protein [Ricinus comm... 141 6e-32 gb|ADI88503.1| RTE1/GR-like protein [Rosa hybrid cultivar] 140 8e-32 ref|NP_001233909.1| green ripe-like 2 [Solanum lycopersicum] gi|... 139 3e-31 >ref|XP_002274106.1| PREDICTED: transmembrane protein 222-like [Vitis vinifera] Length = 231 Score = 147 bits (372), Expect = 7e-34 Identities = 63/89 (70%), Positives = 75/89 (84%) Frame = +2 Query: 119 DPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDFA 298 DPE +M+E S +QIDP R+RFP CIVWTP+PV+SW IPF+GH+G+CREDGVILDFA Sbjct: 6 DPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGVILDFA 65 Query: 299 GPNFVCVDNFTFGAVARYIRIDEGKCCVS 385 GPNFVCVDNF FGAV RYI+I + KCC+S Sbjct: 66 GPNFVCVDNFAFGAVTRYIQISKEKCCIS 94 >ref|XP_004146489.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumis sativus] gi|449500005|ref|XP_004160976.1| PREDICTED: protein RTE1-HOMOLOG-like [Cucumis sativus] Length = 230 Score = 147 bits (371), Expect = 9e-34 Identities = 63/91 (69%), Positives = 80/91 (87%) Frame = +2 Query: 116 EDPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDF 295 +DPE+ LM+E + ++IDPER+RFP CIVWTP+PV+SW +PFIGH+G+ REDGVILDF Sbjct: 9 KDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDF 68 Query: 296 AGPNFVCVDNFTFGAVARYIRIDEGKCCVSS 388 AGPNFVCVDNFTFGAVARY++I+ KCC+S+ Sbjct: 69 AGPNFVCVDNFTFGAVARYLQINRDKCCISA 99 >ref|XP_002534132.1| conserved hypothetical protein [Ricinus communis] gi|223525804|gb|EEF28249.1| conserved hypothetical protein [Ricinus communis] Length = 225 Score = 141 bits (355), Expect = 6e-32 Identities = 61/90 (67%), Positives = 76/90 (84%) Frame = +2 Query: 110 EHEDPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVIL 289 E+ DPE +M E + +QIDP+R+RFP CIVWTP+PV+SW IPFIGH+G+CREDGVIL Sbjct: 3 ENVDPERQMMFEENFQQSMQIDPKRARFPCCIVWTPLPVISWLIPFIGHIGICREDGVIL 62 Query: 290 DFAGPNFVCVDNFTFGAVARYIRIDEGKCC 379 DFAGPNFVCVDNF FGAV+R+I+I++ K C Sbjct: 63 DFAGPNFVCVDNFAFGAVSRFIQINKEKDC 92 >gb|ADI88503.1| RTE1/GR-like protein [Rosa hybrid cultivar] Length = 227 Score = 140 bits (354), Expect = 8e-32 Identities = 60/87 (68%), Positives = 74/87 (85%) Frame = +2 Query: 119 DPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDFA 298 D EH +M++ S+ P LQIDP+R+RFP CIVWTP+PV+SW IPF+GH+G+CREDGVILDFA Sbjct: 6 DSEHHMMIDGSALPTLQIDPKRARFPCCIVWTPLPVISWLIPFVGHIGICREDGVILDFA 65 Query: 299 GPNFVCVDNFTFGAVARYIRIDEGKCC 379 GPNFV VD+F FGA RYI+I + KCC Sbjct: 66 GPNFVSVDDFAFGAPTRYIQISKEKCC 92 >ref|NP_001233909.1| green ripe-like 2 [Solanum lycopersicum] gi|87244451|gb|ABD34617.1| green ripe-like 2 [Solanum lycopersicum] Length = 231 Score = 139 bits (349), Expect = 3e-31 Identities = 60/90 (66%), Positives = 72/90 (80%) Frame = +2 Query: 119 DPEHGLMMEYSSPPPLQIDPERSRFPYCIVWTPIPVLSWFIPFIGHMGLCREDGVILDFA 298 D +H LM+E + P P+ IDP+R RFP CIVW+P+PVLSWFIPFIGH+G+CREDGVILDFA Sbjct: 6 DADHALMIEENYPNPMLIDPKRDRFPCCIVWSPLPVLSWFIPFIGHIGICREDGVILDFA 65 Query: 299 GPNFVCVDNFTFGAVARYIRIDEGKCCVSS 388 GPNFV VDNFTFGA Y ++ +CC S Sbjct: 66 GPNFVSVDNFTFGAPTCYFQLSREQCCCLS 95