BLASTX nr result

ID: Bupleurum21_contig00019535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019535
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303565.1| GRAS family transcription factor [Populus tr...   236   2e-60
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...   235   3e-60
ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun...   232   2e-59
ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [G...   229   2e-58
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   229   2e-58

>ref|XP_002303565.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222840997|gb|EEE78544.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 665

 Score =  236 bits (601), Expect = 2e-60
 Identities = 115/162 (70%), Positives = 137/162 (84%)
 Frame = +3

Query: 3   CVAVNCIFQLHKMLYDGSGIILRDFLGLLRSTNPSIVIMAEQEAEHNHHSLETRLCKSLK 182
           CVA+NCIFQ+HK LYDGSG  LRDFLGL+RSTNP+IV++AEQEAEHN  +LETR+C SLK
Sbjct: 477 CVAINCIFQMHKTLYDGSGGALRDFLGLIRSTNPTIVLLAEQEAEHNAPNLETRVCNSLK 536

Query: 183 YYSAIFDSLDVGLPQDSLARIKIEEMFAREIRNIIACEGRDRLERHEIFGKWSKLMEQGG 362
           YYSAIFDS+D  LP +S  RIK+EEM+AREIRN++ACEG DR ERHE F KW KLMEQGG
Sbjct: 537 YYSAIFDSIDSSLPFNSPVRIKLEEMYAREIRNVVACEGSDRHERHESFDKWKKLMEQGG 596

Query: 363 FRNMGITEREFLQSQMLLKMYTLDNYSVEKQVHDDGSSALTL 488
            R +GI ERE LQ+QMLLKMY+ D+Y V+KQ H++  +ALTL
Sbjct: 597 LRCVGIDEREMLQAQMLLKMYSCDSYKVKKQGHEE--AALTL 636


>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score =  235 bits (599), Expect = 3e-60
 Identities = 120/161 (74%), Positives = 135/161 (83%)
 Frame = +3

Query: 6   VAVNCIFQLHKMLYDGSGIILRDFLGLLRSTNPSIVIMAEQEAEHNHHSLETRLCKSLKY 185
           VAVNCIFQLHK LYDGSG  LRDFLGL+RSTNPSIV+MAEQEAEHN  SLETR+  SL+Y
Sbjct: 490 VAVNCIFQLHKTLYDGSGGALRDFLGLIRSTNPSIVLMAEQEAEHNELSLETRVSNSLRY 549

Query: 186 YSAIFDSLDVGLPQDSLARIKIEEMFAREIRNIIACEGRDRLERHEIFGKWSKLMEQGGF 365
           YSAIFDS+D  LP DS  R+K+EEMFAREIRNIIACEG DR+ERHE F KW + MEQGGF
Sbjct: 550 YSAIFDSIDYSLPLDSPVRMKVEEMFAREIRNIIACEGSDRVERHESFEKWRRRMEQGGF 609

Query: 366 RNMGITEREFLQSQMLLKMYTLDNYSVEKQVHDDGSSALTL 488
           R +GI+ERE LQSQMLLKMY+ +NYSV K+  D   +ALTL
Sbjct: 610 RCVGISEREMLQSQMLLKMYSCENYSVSKRGQD---AALTL 647


>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 662

 Score =  232 bits (592), Expect = 2e-59
 Identities = 116/161 (72%), Positives = 136/161 (84%)
 Frame = +3

Query: 6   VAVNCIFQLHKMLYDGSGIILRDFLGLLRSTNPSIVIMAEQEAEHNHHSLETRLCKSLKY 185
           VAVNC+FQ+HK LYDG+G  LRDFLGL+RST+P+IV+MAEQEAEHN  +LE R+C SLKY
Sbjct: 476 VAVNCVFQMHKTLYDGNGGALRDFLGLIRSTSPTIVLMAEQEAEHNATNLEARVCNSLKY 535

Query: 186 YSAIFDSLDVGLPQDSLARIKIEEMFAREIRNIIACEGRDRLERHEIFGKWSKLMEQGGF 365
           YSAIFDS++  LP DSL RIKIEEMFAREIRNI+ACEG DRLERHE F KW KLMEQGGF
Sbjct: 536 YSAIFDSINTSLPLDSLVRIKIEEMFAREIRNIVACEGSDRLERHESFEKWRKLMEQGGF 595

Query: 366 RNMGITEREFLQSQMLLKMYTLDNYSVEKQVHDDGSSALTL 488
           R MGI+ERE LQSQMLLKMY+ ++Y V+++      +ALTL
Sbjct: 596 RCMGISEREVLQSQMLLKMYSCEDYRVKER---QDRAALTL 633


>ref|XP_003525725.1| PREDICTED: scarecrow-like protein 28-like [Glycine max]
          Length = 664

 Score =  229 bits (583), Expect = 2e-58
 Identities = 112/163 (68%), Positives = 139/163 (85%), Gaps = 2/163 (1%)
 Frame = +3

Query: 6   VAVNCIFQLHKMLYDGSGIILRDFLGLLRSTNPSIVIMAEQEAEHNHHSLETRLCKSLKY 185
           VAVNC+ QLHK LYDGSG  LRDFLGL+RSTNPS+V++AEQEAEHN + LE R+C SLKY
Sbjct: 473 VAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSVVVVAEQEAEHNENRLEGRVCNSLKY 532

Query: 186 YSAIFDSLD-VGLPQDSLARIKIEEMFAREIRNIIACEGRDRLERHEIFGKWSKLM-EQG 359
           YSA+FDS+D  GLPQ+S  R+KIEEM+A+EIRNI+ACEGR+R+ERHE FG W ++M EQG
Sbjct: 533 YSALFDSIDESGLPQESAVRVKIEEMYAKEIRNIVACEGRERVERHESFGNWRRMMVEQG 592

Query: 360 GFRNMGITEREFLQSQMLLKMYTLDNYSVEKQVHDDGSSALTL 488
           GFR MG+TERE  QSQMLLKMY+ ++YSV+KQ   +G++ +TL
Sbjct: 593 GFRCMGVTERELSQSQMLLKMYSCESYSVKKQ-EKEGATGVTL 634


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score =  229 bits (583), Expect = 2e-58
 Identities = 113/162 (69%), Positives = 133/162 (82%)
 Frame = +3

Query: 3   CVAVNCIFQLHKMLYDGSGIILRDFLGLLRSTNPSIVIMAEQEAEHNHHSLETRLCKSLK 182
           CVA+NC+FQ+HK LYDGSG  LRDFLGL+RSTNP+IVI+AEQEAEHN  +LETR+C SLK
Sbjct: 478 CVAINCVFQMHKTLYDGSGGALRDFLGLIRSTNPAIVIVAEQEAEHNAPNLETRVCNSLK 537

Query: 183 YYSAIFDSLDVGLPQDSLARIKIEEMFAREIRNIIACEGRDRLERHEIFGKWSKLMEQGG 362
           YYSA+FDS+D  LP DS  RIKIEEM+AREIRNI+ACEG DR ERHE+   W KLMEQGG
Sbjct: 538 YYSALFDSIDSSLPFDSPVRIKIEEMYAREIRNIVACEGSDRHERHEMLDNWKKLMEQGG 597

Query: 363 FRNMGITEREFLQSQMLLKMYTLDNYSVEKQVHDDGSSALTL 488
            R + I+ERE LQSQ+LLKMY+ D+Y V+K  H    +ALTL
Sbjct: 598 LRCLVISEREMLQSQILLKMYSCDSYQVKK--HGQEGAALTL 637


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