BLASTX nr result
ID: Bupleurum21_contig00019524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00019524
(752 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20722.3| unnamed protein product [Vitis vinifera] 98 3e-36
ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like ... 98 3e-36
ref|NP_567916.2| F-box/LRR-repeat protein 15 [Arabidopsis thalia... 97 4e-35
emb|CAB36795.1| putative protein [Arabidopsis thaliana] gi|72702... 97 4e-35
ref|XP_002309467.1| f-box family protein [Populus trichocarpa] g... 99 4e-35
>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
Length = 957
Score = 98.2 bits (243), Expect(3) = 3e-36
Identities = 55/90 (61%), Positives = 61/90 (67%)
Frame = +2
Query: 176 PSLSLLQIANCKKFCFPFMKDVVLKADYLSATTTSCPLIELLILMS*PSIGADGLSSLCW 355
P L+ L + C K LK D LSAT SCP IE LILMS PS+G +GLSSL
Sbjct: 651 PMLTSLDASFCSK----------LKDDCLSATAASCPFIESLILMSCPSVGYEGLSSLRL 700
Query: 356 LPHLLSLDLSYTFLMNLQPIFYSCLQLKVI 445
LPHL LDLSYTFLMNLQP+F SCLQLKV+
Sbjct: 701 LPHLTLLDLSYTFLMNLQPVFESCLQLKVL 730
Score = 60.1 bits (144), Expect(3) = 3e-36
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +1
Query: 562 VLKLQACKYLDDSFSEPLYSKWC--ALCELDFSYGTLCQSAIKDLFVVQIYL 711
VLKLQACKYL DS E LY + ALCELD SYG LCQSAI++L +L
Sbjct: 729 VLKLQACKYLTDSSLEALYKEGALPALCELDLSYGALCQSAIEELLACCTHL 780
Score = 40.8 bits (94), Expect(3) = 3e-36
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 693 CCTNLPHVSLNGYINMHDLN 752
CCT+L HVSLNG +NMHDLN
Sbjct: 776 CCTHLTHVSLNGCLNMHDLN 795
>ref|XP_002279983.2| PREDICTED: F-box/LRR-repeat protein 15-like [Vitis vinifera]
Length = 922
Score = 98.2 bits (243), Expect(3) = 3e-36
Identities = 55/90 (61%), Positives = 61/90 (67%)
Frame = +2
Query: 176 PSLSLLQIANCKKFCFPFMKDVVLKADYLSATTTSCPLIELLILMS*PSIGADGLSSLCW 355
P L+ L + C K LK D LSAT SCP IE LILMS PS+G +GLSSL
Sbjct: 685 PMLTSLDASFCSK----------LKDDCLSATAASCPFIESLILMSCPSVGYEGLSSLRL 734
Query: 356 LPHLLSLDLSYTFLMNLQPIFYSCLQLKVI 445
LPHL LDLSYTFLMNLQP+F SCLQLKV+
Sbjct: 735 LPHLTLLDLSYTFLMNLQPVFESCLQLKVL 764
Score = 60.1 bits (144), Expect(3) = 3e-36
Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +1
Query: 562 VLKLQACKYLDDSFSEPLYSKWC--ALCELDFSYGTLCQSAIKDLFVVQIYL 711
VLKLQACKYL DS E LY + ALCELD SYG LCQSAI++L +L
Sbjct: 763 VLKLQACKYLTDSSLEALYKEGALPALCELDLSYGALCQSAIEELLACCTHL 814
Score = 40.8 bits (94), Expect(3) = 3e-36
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +3
Query: 693 CCTNLPHVSLNGYINMHDLN 752
CCT+L HVSLNG +NMHDLN
Sbjct: 810 CCTHLTHVSLNGCLNMHDLN 829
>ref|NP_567916.2| F-box/LRR-repeat protein 15 [Arabidopsis thaliana]
gi|124007179|sp|Q9SMY8.2|FBL15_ARATH RecName:
Full=F-box/LRR-repeat protein 15
gi|332660791|gb|AEE86191.1| F-box/LRR-repeat protein 15
[Arabidopsis thaliana]
Length = 990
Score = 97.4 bits (241), Expect(3) = 4e-35
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 245 LKADYLSATTTSCPLIELLILMS*PSIGADGLSSLCWLPHLLSLDLSYTFLMNLQPIFYS 424
L+ D LSATT SCPLIE L+LMS PSIG+DGLSSL LP+L LDLSYTFLMNL+P+F S
Sbjct: 697 LRDDCLSATTASCPLIESLVLMSCPSIGSDGLSSLNGLPNLTVLDLSYTFLMNLEPVFKS 756
Query: 425 CLQLKVI 445
C+QLKV+
Sbjct: 757 CIQLKVL 763
Score = 59.7 bits (143), Expect(3) = 4e-35
Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +1
Query: 562 VLKLQACKYLDDSFSEPLYSKWC--ALCELDFSYGTLCQSAIKDLFVVQIYL 711
VLKLQACKYL DS EPLY + AL ELD SYGTLCQ+AI DL +L
Sbjct: 762 VLKLQACKYLTDSSLEPLYKEGALPALEELDLSYGTLCQTAIDDLLACCTHL 813
Score = 38.1 bits (87), Expect(3) = 4e-35
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 693 CCTNLPHVSLNGYINMHDLN 752
CCT+L H+SLNG +NMHDL+
Sbjct: 809 CCTHLTHLSLNGCVNMHDLD 828
>emb|CAB36795.1| putative protein [Arabidopsis thaliana] gi|7270269|emb|CAB80038.1|
putative protein [Arabidopsis thaliana]
Length = 934
Score = 97.4 bits (241), Expect(3) = 4e-35
Identities = 49/67 (73%), Positives = 57/67 (85%)
Frame = +2
Query: 245 LKADYLSATTTSCPLIELLILMS*PSIGADGLSSLCWLPHLLSLDLSYTFLMNLQPIFYS 424
L+ D LSATT SCPLIE L+LMS PSIG+DGLSSL LP+L LDLSYTFLMNL+P+F S
Sbjct: 697 LRDDCLSATTASCPLIESLVLMSCPSIGSDGLSSLNGLPNLTVLDLSYTFLMNLEPVFKS 756
Query: 425 CLQLKVI 445
C+QLKV+
Sbjct: 757 CIQLKVL 763
Score = 59.7 bits (143), Expect(3) = 4e-35
Identities = 33/52 (63%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +1
Query: 562 VLKLQACKYLDDSFSEPLYSKWC--ALCELDFSYGTLCQSAIKDLFVVQIYL 711
VLKLQACKYL DS EPLY + AL ELD SYGTLCQ+AI DL +L
Sbjct: 762 VLKLQACKYLTDSSLEPLYKEGALPALEELDLSYGTLCQTAIDDLLACCTHL 813
Score = 38.1 bits (87), Expect(3) = 4e-35
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +3
Query: 693 CCTNLPHVSLNGYINMHDLN 752
CCT+L H+SLNG +NMHDL+
Sbjct: 809 CCTHLTHLSLNGCVNMHDLD 828
>ref|XP_002309467.1| f-box family protein [Populus trichocarpa]
gi|222855443|gb|EEE92990.1| f-box family protein
[Populus trichocarpa]
Length = 895
Score = 99.4 bits (246), Expect(3) = 4e-35
Identities = 68/136 (50%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Frame = +2
Query: 41 FCSLAFSVYGV*L*KLHKFLSIYAR-MIVLDFSFLPVQVEFADSSNPSLSLLQIANCKKF 217
FC +A + + K LSI A M+ L+ V E A + P L+ L + C +
Sbjct: 610 FCPVALRSLNLGICPKLKILSIEAPCMVSLELKGCGVLSE-ASINCPLLTSLDASFCSQ- 667
Query: 218 CFPFMKDVVLKADYLSATTTSCPLIELLILMS*PSIGADGLSSLCWLPHLLSLDLSYTFL 397
LK D LSATT SCPLI LILMS PS+G+DGL SL LPHL LDLSYTFL
Sbjct: 668 ---------LKDDCLSATTASCPLIGSLILMSCPSVGSDGLLSLQRLPHLSVLDLSYTFL 718
Query: 398 MNLQPIFYSCLQLKVI 445
MNLQP+F SCLQLKV+
Sbjct: 719 MNLQPVFDSCLQLKVL 734
Score = 58.2 bits (139), Expect(3) = 4e-35
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = +1
Query: 562 VLKLQACKYLDDSFSEPLYSKWC--ALCELDFSYGTLCQSAIKDL 690
VLKLQACKYL D+ EPLY AL ELD SYGTLCQSAI++L
Sbjct: 733 VLKLQACKYLTDTSLEPLYKDGALPALQELDLSYGTLCQSAIEEL 777
Score = 37.7 bits (86), Expect(3) = 4e-35
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 693 CCTNLPHVSLNGYINMHDLN 752
CC +L H+SLNG +NMHDLN
Sbjct: 780 CCRHLTHLSLNGCVNMHDLN 799