BLASTX nr result

ID: Bupleurum21_contig00019460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019460
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625415.1| WD repeat-containing protein [Medicago trunc...    62   6e-08
ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_004152006.1| PREDICTED: WD repeat-containing protein 70-l...    58   9e-07
ref|XP_002526531.1| nucleotide binding protein, putative [Ricinu...    58   9e-07
ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-l...    57   1e-06

>ref|XP_003625415.1| WD repeat-containing protein [Medicago truncatula]
           gi|355500430|gb|AES81633.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 611

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 60  DDDGEIYEGIRANFPISFGKKTKSQTPLEAIHKSTIR 170
           +D GEIY+G+RA FP+SFGK++KSQTPLE IHK+T R
Sbjct: 2   EDSGEIYDGVRAEFPLSFGKQSKSQTPLETIHKATRR 38


>ref|XP_002320613.1| predicted protein [Populus trichocarpa] gi|222861386|gb|EEE98928.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/38 (60%), Positives = 34/38 (89%)
 Frame = +3

Query: 57  DDDDGEIYEGIRANFPISFGKKTKSQTPLEAIHKSTIR 170
           ++++ EIY+G+RA FP++FGK++KSQTPLE IH +TIR
Sbjct: 2   EEEEAEIYDGVRAQFPLTFGKQSKSQTPLEQIHNTTIR 39


>ref|XP_004152006.1| PREDICTED: WD repeat-containing protein 70-like [Cucumis sativus]
           gi|449509056|ref|XP_004163480.1| PREDICTED: WD
           repeat-containing protein 70-like [Cucumis sativus]
          Length = 646

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/37 (64%), Positives = 33/37 (89%)
 Frame = +3

Query: 60  DDDGEIYEGIRANFPISFGKKTKSQTPLEAIHKSTIR 170
           +D+ EIY+GIRA FP++FGK++K+QTPLEAIH +T R
Sbjct: 2   EDEAEIYDGIRAQFPLTFGKQSKAQTPLEAIHNTTRR 38


>ref|XP_002526531.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223534092|gb|EEF35809.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 658

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/37 (64%), Positives = 33/37 (89%)
 Frame = +3

Query: 60  DDDGEIYEGIRANFPISFGKKTKSQTPLEAIHKSTIR 170
           +D+ +IY+GIRA+FP++FGK++KSQTPLE IH ST R
Sbjct: 14  EDEADIYDGIRAHFPLTFGKQSKSQTPLEVIHNSTRR 50


>ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-like [Glycine max]
          Length = 614

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/37 (62%), Positives = 33/37 (89%)
 Frame = +3

Query: 60  DDDGEIYEGIRANFPISFGKKTKSQTPLEAIHKSTIR 170
           +++G+IY+G+RA FP+SFGK++K QTPLEAIH +T R
Sbjct: 2   EEEGDIYDGVRAQFPLSFGKQSKPQTPLEAIHNATRR 38


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