BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019297
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...   130   3e-28
ref|XP_002320192.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   126   4e-27

>ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  130 bits (327), Expect = 2e-28
 Identities = 67/136 (49%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
 Frame = -3

Query: 396 SSDLCLDDHL----NELKSLHSVKVRHAQIIKMSKEWNSQIKMQSLVTSYLAFGDPQSAV 229
           +S L LD H     N + SL SVK+ HAQ+IK+ ++WN     ++L++SYL FGD  SA 
Sbjct: 27  TSKLYLDSHSSDDSNVITSLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAA 86

Query: 228 MLFLVDSPENCLYWNSFLLEFKINGRSPFEILEVFSDLHQKGVSFDSGSLTVILKLCANL 49
           M+F V  P N L WNSF+ EFK +  S   +LEVF +LH KGV FDS   +V LK C  +
Sbjct: 87  MVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRV 146

Query: 48  REIWLGLEVHACLIKK 1
            +IWLG+E+H CLIK+
Sbjct: 147 MDIWLGMEIHGCLIKR 162


>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  130 bits (326), Expect = 3e-28
 Identities = 59/125 (47%), Positives = 86/125 (68%)
 Frame = -3

Query: 375 DHLNELKSLHSVKVRHAQIIKMSKEWNSQIKMQSLVTSYLAFGDPQSAVMLFLVDSPENC 196
           D  +++K+L S+   HAQ+IK    WNS    ++L+TSYL  GD +S+ M+F V    N 
Sbjct: 70  DSSSDVKTLDSINAMHAQLIKTCSMWNSDSNARTLITSYLELGDFRSSAMVFFVGFARNY 129

Query: 195 LYWNSFLLEFKINGRSPFEILEVFSDLHQKGVSFDSGSLTVILKLCANLREIWLGLEVHA 16
           + W+SF+ EF+  G  P ++L VF +LH KGV+FDSG +TV+LK+C  + ++WLGLEVHA
Sbjct: 130 VMWSSFMEEFENCGGDPIQVLNVFKELHSKGVTFDSGMVTVVLKICIRVMDLWLGLEVHA 189

Query: 15  CLIKK 1
            LIK+
Sbjct: 190 SLIKR 194


>ref|XP_002320192.1| predicted protein [Populus trichocarpa] gi|222860965|gb|EEE98507.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  129 bits (324), Expect = 5e-28
 Identities = 66/150 (44%), Positives = 95/150 (63%)
 Frame = -3

Query: 450 SVTNIAENSPQTSFTAHVSSDLCLDDHLNELKSLHSVKVRHAQIIKMSKEWNSQIKMQSL 271
           + T+  E +P+ +   ++ S   L+    +  +L SVK  HAQ+IK   +WNS    + L
Sbjct: 35  TTTSSLETTPRPTHVPNLGS---LNGFTADSNTLDSVKAMHAQMIKKGNKWNSDSMAKHL 91

Query: 270 VTSYLAFGDPQSAVMLFLVDSPENCLYWNSFLLEFKINGRSPFEILEVFSDLHQKGVSFD 91
           +TSYL  GD +SA ++F V    N + WN+FL EFK  G  P E+LEVF +LH +GV FD
Sbjct: 92  ITSYLELGDCKSAAVVFFVGFARNYVMWNNFLEEFKSFGGDPSEVLEVFKELHCEGVVFD 151

Query: 90  SGSLTVILKLCANLREIWLGLEVHACLIKK 1
           S  ++V+LK+CA +  +WLGLEVHA LIK+
Sbjct: 152 SRVISVVLKICAGVMNLWLGLEVHASLIKR 181


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  127 bits (318), Expect = 2e-27
 Identities = 64/123 (52%), Positives = 84/123 (68%)
 Frame = -3

Query: 369 LNELKSLHSVKVRHAQIIKMSKEWNSQIKMQSLVTSYLAFGDPQSAVMLFLVDSPENCLY 190
           L  +++L+SV+  HAQ+IKM K+ N      S++ +YL FGD +SA  +F V    N L 
Sbjct: 38  LGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLL 97

Query: 189 WNSFLLEFKINGRSPFEILEVFSDLHQKGVSFDSGSLTVILKLCANLREIWLGLEVHACL 10
           WNSFL EF   G    EILEVF +LH KGV FDS +LTV+LK+C  L E+WLG+EVHACL
Sbjct: 98  WNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACL 157

Query: 9   IKK 1
           +K+
Sbjct: 158 LKR 160


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  126 bits (316), Expect = 4e-27
 Identities = 63/121 (52%), Positives = 83/121 (68%)
 Frame = -3

Query: 363 ELKSLHSVKVRHAQIIKMSKEWNSQIKMQSLVTSYLAFGDPQSAVMLFLVDSPENCLYWN 184
           E+++L+SV+  HAQIIKM K+ N      S++ +YL FGD +SA  +F V    N L WN
Sbjct: 40  EIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFARNYLLWN 99

Query: 183 SFLLEFKINGRSPFEILEVFSDLHQKGVSFDSGSLTVILKLCANLREIWLGLEVHACLIK 4
           SF+ EF   G    EIL VF +LH KGV FDS +LTV+LK+C  L E+WLG+EVHACL+K
Sbjct: 100 SFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVK 159

Query: 3   K 1
           +
Sbjct: 160 R 160