BLASTX nr result

ID: Bupleurum21_contig00019276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019276
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   136   2e-30
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              136   2e-30
emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]   136   2e-30
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   131   6e-29

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/88 (73%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2    QAGYDYCRKNFLSAQTLRAIDSLRKQFFYLLKDTGLIDD-IDGCNTWSHDEHLF*AITYA 178
            Q+GY+YC +NFLSAQTL+AIDSLR+QFFYLLKD GL+++  + CN WSHDEHL  A+  A
Sbjct: 846  QSGYEYCWRNFLSAQTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICA 905

Query: 179  GLYPGICSVVNKEKLISLKTMEDGPVLL 262
            GL+PGICSVVNKEK ISLKTMEDG VLL
Sbjct: 906  GLFPGICSVVNKEKSISLKTMEDGQVLL 933


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/88 (73%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   QAGYDYCRKNFLSAQTLRAIDSLRKQFFYLLKDTGLIDD-IDGCNTWSHDEHLF*AITYA 178
           Q+GY+YC +NFLSAQTL+AIDSLR+QFFYLLKD GL+++  + CN WSHDEHL  A+  A
Sbjct: 725 QSGYEYCWRNFLSAQTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICA 784

Query: 179 GLYPGICSVVNKEKLISLKTMEDGPVLL 262
           GL+PGICSVVNKEK ISLKTMEDG VLL
Sbjct: 785 GLFPGICSVVNKEKSISLKTMEDGQVLL 812


>emb|CAN67889.1| hypothetical protein VITISV_013607 [Vitis vinifera]
          Length = 558

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/88 (73%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   QAGYDYCRKNFLSAQTLRAIDSLRKQFFYLLKDTGLIDD-IDGCNTWSHDEHLF*AITYA 178
           Q+GY+YC +NFLSAQTL+AIDSLR+QFFYLLKD GL+++  + CN WSHDEHL  A+  A
Sbjct: 226 QSGYEYCWRNFLSAQTLKAIDSLRRQFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICA 285

Query: 179 GLYPGICSVVNKEKLISLKTMEDGPVLL 262
           GL+PGICSVVNKEK ISLKTMEDG VLL
Sbjct: 286 GLFPGICSVVNKEKSISLKTMEDGQVLL 313


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
            predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  132 bits (331), Expect = 4e-29
 Identities = 66/96 (68%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2    QAGYDYCRKNFLSAQTLRAIDSLRKQFFYLLKDTGLID-DIDGCNTWSHDEHLF*AITYA 178
            Q+G++YC KNFLSAQTL+AIDSLRKQFFYLLKDTGL+D  I+ CN+ S DEHL  A+  A
Sbjct: 728  QSGHEYCWKNFLSAQTLKAIDSLRKQFFYLLKDTGLVDKQIENCNSRSIDEHLMRAVICA 787

Query: 179  GLYPGICSVVNKEKLISLKTMEDGPVLLQNKEFATG 286
            GL+PG+CSVVNKEK I+LKTMEDG VLL +     G
Sbjct: 788  GLFPGLCSVVNKEKSITLKTMEDGQVLLYSNSVNAG 823


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1058

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/96 (68%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2    QAGYDYCRKNFLSAQTLRAIDSLRKQFFYLLKDTGLIDD-IDGCNTWSHDEHLF*AITYA 178
            Q+GY+YC KNFLSAQT+RAID+LRKQFFYLLKDTGL+    + C+  SHDEHL  AI  A
Sbjct: 765  QSGYEYCWKNFLSAQTMRAIDALRKQFFYLLKDTGLLGQKTEDCSMLSHDEHLIRAIICA 824

Query: 179  GLYPGICSVVNKEKLISLKTMEDGPVLLQNKEFATG 286
            GL+PGICSVVNKEK I+LKTMEDG VLL +     G
Sbjct: 825  GLFPGICSVVNKEKSITLKTMEDGQVLLHSNSVNAG 860


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