BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019146
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU25705.1| gag-pol precursor [Castanea mollissima]                 91   3e-21
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    89   9e-20
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                      87   1e-19
emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]    88   3e-19
emb|CAN71502.1| hypothetical protein VITISV_021013 [Vitis vinifera]    87   3e-19

>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
          Length = 1106

 Score = 90.5 bits (223), Expect(2) = 3e-21
 Identities = 40/106 (37%), Positives = 69/106 (65%)
 Frame = -2

Query: 319  LRGIEKRLEESKKNWPEELPNVLWSYRTSPRTSMGETLFRLAYGIEAMLPIEVGSPSHRV 140
            L G++K L+++K  W EELP+VLW+YRT+PR S GET F + YG+EA++P+E+G P+ + 
Sbjct: 932  LAGLKKHLDDAKGRWVEELPHVLWAYRTTPRRSTGETPFSMTYGMEAVIPLELGFPTLKF 991

Query: 139  IHFEEVANEERIRTNLKLLDEVRDQAVHNIE*YKEKTRAYFGQKAK 2
              +  V N + +  +L  ++E R+ A   +  Y++K +  + +  K
Sbjct: 992  DQYNNVTNHDMLHDSLNTIEERREVASVKMGSYQQKLKQAYDKGVK 1037



 Score = 36.2 bits (82), Expect(2) = 3e-21
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -3

Query: 393 GIKHKKSSVAYPQGNGQVEVTNRILCEELKR 301
           GI++  S+ AYPQGN Q E TN+++   LK+
Sbjct: 907 GIRNGYSTPAYPQGNSQAEATNKVILAGLKK 937


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 89.4 bits (220), Expect(2) = 9e-20
 Identities = 45/108 (41%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
 Frame = -2

Query: 319  LRGIEKRLEESKKNWPEELPNVLWSYRTSPRTSMGETLFRLAYGIEAMLPIEVGSPSHR- 143
            L G++KRL+E K  W +EL  VLWSYRT+PR S   T F L YG+EA+ P E G P+ R 
Sbjct: 1611 LDGLKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRR 1670

Query: 142  -VIHFEEVANEERIRTNLKLLDEVRDQAVHNIE*YKEKTRAYFGQKAK 2
             ++  +   N++ +  NL  L+E RDQA+  I+ Y++    ++ +K K
Sbjct: 1671 SMLINDPTLNDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVK 1718



 Score = 32.3 bits (72), Expect(2) = 9e-20
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 390  IKHKKSSVAYPQGNGQVEVTNRILCEELKR 301
            I+  KS+  YPQ NGQ E TN+ + + LK+
Sbjct: 1587 IRLSKSTPRYPQCNGQAEATNKTILDGLKK 1616


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score = 87.0 bits (214), Expect(2) = 1e-19
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = -2

Query: 319  LRGIEKRLEESKKNWPEELPNVLWSYRTSPRTSMGETLFRLAYGIEAMLPIEVGSPSHRV 140
            L G++K++E+ K  W +ELP VLWS RT+ + + G + F L YG EA+LPIE   P+ R 
Sbjct: 1133 LNGLKKKVEDLKGRWADELPGVLWSLRTTEKEATGYSPFHLVYGSEAVLPIEAVVPTFRT 1192

Query: 139  IHFEEVANEERIRTNLKLLDEVRDQAVHNIE*YKEKTRAYFGQK 8
              F  V NEE ++ +L L++E RD A  N+  Y+ + R  +  +
Sbjct: 1193 ATFNPVENEEGLKASLDLVEESRDTARLNLAVYQNRMRRAYNHR 1236



 Score = 33.9 bits (76), Expect(2) = 1e-19
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 393  GIKHKKSSVAYPQGNGQVEVTNRILCEELKR 301
            GIK   SSV +PQ NGQ E  N+ +   LK+
Sbjct: 1108 GIKFAYSSVCHPQSNGQAEAANKTILNGLKK 1138


>emb|CAN78580.1| hypothetical protein VITISV_013552 [Vitis vinifera]
          Length = 978

 Score = 87.8 bits (216), Expect(2) = 3e-19
 Identities = 41/103 (39%), Positives = 65/103 (63%)
 Frame = -2

Query: 310  IEKRLEESKKNWPEELPNVLWSYRTSPRTSMGETLFRLAYGIEAMLPIEVGSPSHRVIHF 131
            ++KRLE++K  W EELP VLW+YRT+P    G T F LAYG++A++P E+G P+ R    
Sbjct: 807  LKKRLEQAKGKWVEELPGVLWAYRTTPERPTGNTPFALAYGMDAVIPTEIGLPTIRTDAA 866

Query: 130  EEVANEERIRTNLKLLDEVRDQAVHNIE*YKEKTRAYFGQKAK 2
            ++      +  NL   DEVR+ AV  +  Y+++  A++ +K +
Sbjct: 867  KQSDANMELGRNLDWTDEVRESAVIRMADYQQRASAHYNRKVR 909



 Score = 32.0 bits (71), Expect(2) = 3e-19
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 390 IKHKKSSVAYPQGNGQVEVTNRILCEELKRGWKNPK 283
           I++  S+  YPQ NGQ E TN+ L   LK+  +  K
Sbjct: 780 IRNSYSTPRYPQSNGQAEATNKTLIIALKKRLEQAK 815


>emb|CAN71502.1| hypothetical protein VITISV_021013 [Vitis vinifera]
          Length = 936

 Score = 87.4 bits (215), Expect(2) = 3e-19
 Identities = 41/106 (38%), Positives = 65/106 (61%)
 Frame = -2

Query: 319  LRGIEKRLEESKKNWPEELPNVLWSYRTSPRTSMGETLFRLAYGIEAMLPIEVGSPSHRV 140
            +  ++KRLE+ K  W EELP VLW+YRT+P    G TLF LAYG++A++P E+G P+ R 
Sbjct: 762  ITALKKRLEQGKGKWVEELPGVLWAYRTTPGRPTGNTLFALAYGMDAVIPTEIGLPTIRT 821

Query: 139  IHFEEVANEERIRTNLKLLDEVRDQAVHNIE*YKEKTRAYFGQKAK 2
               ++      +  NL   +EVR+ A   +  Y+++  A++ +K K
Sbjct: 822  DTAKQNDANTELGRNLDWANEVRESAAIRMANYQQRASAHYNRKVK 867



 Score = 32.3 bits (72), Expect(2) = 3e-19
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 390 IKHKKSSVAYPQGNGQVEVTNRILCEELKR 301
           I++  S+  YPQ NGQ E TN+ L   LK+
Sbjct: 738 IRNSYSTPRYPQSNGQAEATNKTLITALKK 767