BLASTX nr result

ID: Bupleurum21_contig00019074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019074
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18544.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_002267287.1| PREDICTED: tyrosine-protein phosphatase non-...   413   e-113
ref|XP_002887394.1| hypothetical protein ARALYDRAFT_339406 [Arab...   395   e-108
ref|XP_002327226.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108
emb|CAJ77612.1| protein tyrosine phosphatase [Fagus sylvatica]        394   e-107

>emb|CBI18544.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  413 bits (1061), Expect = e-113
 Identities = 201/275 (73%), Positives = 226/275 (82%), Gaps = 1/275 (0%)
 Frame = -2

Query: 1026 DKISQTGLISREFDILQTNRMRALEANNRCSVAYSTNNIRKNRYTDVVPFDENRVVLNPY 847
            DK+     I +EF  LQ NRMR  E    C+VA  + N+ KNRYTDV+PFD+ RVVLN  
Sbjct: 48   DKLQMPEKIRQEFAFLQANRMRPSEMMRSCTVALDSVNLSKNRYTDVLPFDKTRVVLNSC 107

Query: 846  KDQQ-SDRGYINASFIATSPSETVSRFIATQGPMPNTYKDFWEMVLQYRCPAIVMLTRLV 670
            KD + S RGYINASFI TS +E++SRFIATQGP+P+TY+DFWEMV+QY CP IVMLTRLV
Sbjct: 108  KDYRPSARGYINASFIETSSTESISRFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLV 167

Query: 669  DNYKTEKCGDYFQAEDGSREFGNICVTTKWIKTTRTSLVLRNLEVKYKESEEPPLSVLHI 490
            DNYKT KCGDYFQAEDG REFGNI + TKWIKTT TSLVLR+LEV YKESEEP LSVLHI
Sbjct: 168  DNYKTVKCGDYFQAEDGPREFGNIFIVTKWIKTTETSLVLRHLEVNYKESEEPSLSVLHI 227

Query: 489  LYPDWPDHGVPEDTLAVREIWRRLCSVPPTAGPIVVHCSAGIGRTGTYCTVHNTIQRILA 310
             YP+WPDHGVP DT AVRE+ +R+C V P+ GPIVVHCSAGIGRTGTYCT+HNTIQRIL 
Sbjct: 228  QYPEWPDHGVPRDTCAVREMLKRMCHVLPSLGPIVVHCSAGIGRTGTYCTIHNTIQRILI 287

Query: 309  GDMSALDLVKTISEFRSQRIGMVQTKEQFFYCYVA 205
            GDMSALDLV TI+ FRSQRIGMVQT EQF +CY A
Sbjct: 288  GDMSALDLVNTITTFRSQRIGMVQTMEQFLFCYNA 322


>ref|XP_002267287.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 20-like
            [Vitis vinifera]
          Length = 339

 Score =  413 bits (1061), Expect = e-113
 Identities = 201/275 (73%), Positives = 226/275 (82%), Gaps = 1/275 (0%)
 Frame = -2

Query: 1026 DKISQTGLISREFDILQTNRMRALEANNRCSVAYSTNNIRKNRYTDVVPFDENRVVLNPY 847
            DK+     I +EF  LQ NRMR  E    C+VA  + N+ KNRYTDV+PFD+ RVVLN  
Sbjct: 48   DKLQMPEKIRQEFAFLQANRMRPSEMMRSCTVALDSVNLSKNRYTDVLPFDKTRVVLNSC 107

Query: 846  KDQQ-SDRGYINASFIATSPSETVSRFIATQGPMPNTYKDFWEMVLQYRCPAIVMLTRLV 670
            KD + S RGYINASFI TS +E++SRFIATQGP+P+TY+DFWEMV+QY CP IVMLTRLV
Sbjct: 108  KDYRPSARGYINASFIETSSTESISRFIATQGPLPHTYEDFWEMVIQYHCPVIVMLTRLV 167

Query: 669  DNYKTEKCGDYFQAEDGSREFGNICVTTKWIKTTRTSLVLRNLEVKYKESEEPPLSVLHI 490
            DNYKT KCGDYFQAEDG REFGNI + TKWIKTT TSLVLR+LEV YKESEEP LSVLHI
Sbjct: 168  DNYKTVKCGDYFQAEDGPREFGNIFIVTKWIKTTETSLVLRHLEVNYKESEEPSLSVLHI 227

Query: 489  LYPDWPDHGVPEDTLAVREIWRRLCSVPPTAGPIVVHCSAGIGRTGTYCTVHNTIQRILA 310
             YP+WPDHGVP DT AVRE+ +R+C V P+ GPIVVHCSAGIGRTGTYCT+HNTIQRIL 
Sbjct: 228  QYPEWPDHGVPRDTCAVREMLKRMCHVLPSLGPIVVHCSAGIGRTGTYCTIHNTIQRILI 287

Query: 309  GDMSALDLVKTISEFRSQRIGMVQTKEQFFYCYVA 205
            GDMSALDLV TI+ FRSQRIGMVQT EQF +CY A
Sbjct: 288  GDMSALDLVNTITTFRSQRIGMVQTMEQFLFCYNA 322


>ref|XP_002887394.1| hypothetical protein ARALYDRAFT_339406 [Arabidopsis lyrata subsp.
            lyrata] gi|297333235|gb|EFH63653.1| hypothetical protein
            ARALYDRAFT_339406 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  395 bits (1016), Expect = e-108
 Identities = 191/272 (70%), Positives = 225/272 (82%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1023 KISQTGLISREFDILQTNRMRALEANNRCSVAYSTNNIRKNRYTDVVPFDENRVVLNPYK 844
            KI     I+ EF  LQ NRM   E     +VA ++ NI KNRY+DVVPFD+NR+VLNP K
Sbjct: 51   KIQDPDSIAHEFAGLQANRMWPSEMLLNSTVAMNSVNIEKNRYSDVVPFDKNRIVLNPCK 110

Query: 843  DQQSD-RGYINASFIATSPSETVSRFIATQGPMPNTYKDFWEMVLQYRCPAIVMLTRLVD 667
            D +S  +GY+NAS I TS SE++S+FIATQGP+P+T +DFWEMV+Q  CP IVMLTRLVD
Sbjct: 111  DYRSSAKGYVNASLIKTSDSESISQFIATQGPLPHTMEDFWEMVIQQHCPIIVMLTRLVD 170

Query: 666  NYKTEKCGDYFQAEDGSREFGNICVTTKWIKTTRTSLVLRNLEVKYKESEEPPLSVLHIL 487
            N +T KCGDYFQAEDGSREFGNI VTTKWIK+T TSL+LRNLEV YKE+E+ P+SVLHI 
Sbjct: 171  NNRTVKCGDYFQAEDGSREFGNISVTTKWIKSTETSLMLRNLEVNYKETEDRPMSVLHIQ 230

Query: 486  YPDWPDHGVPEDTLAVREIWRRLCSVPPTAGPIVVHCSAGIGRTGTYCTVHNTIQRILAG 307
            YP+WPDHGVP DT+AVREI +RL  VPP+ GPI+VHCSAGIGRTGTYC +HNTIQRILAG
Sbjct: 231  YPEWPDHGVPRDTVAVREILKRLYQVPPSLGPIIVHCSAGIGRTGTYCAIHNTIQRILAG 290

Query: 306  DMSALDLVKTISEFRSQRIGMVQTKEQFFYCY 211
            DMSALDL KT++ FRSQRIGMVQT +Q+F+CY
Sbjct: 291  DMSALDLAKTVAIFRSQRIGMVQTMDQYFFCY 322


>ref|XP_002327226.1| predicted protein [Populus trichocarpa] gi|222835596|gb|EEE74031.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  395 bits (1015), Expect = e-108
 Identities = 184/267 (68%), Positives = 223/267 (83%), Gaps = 1/267 (0%)
 Frame = -2

Query: 1002 ISREFDILQTNRMRALEANNRCSVAYSTNNIRKNRYTDVVPFDENRVVLNPYKDQQ-SDR 826
            I++EF  LQ +R+   +    C VA    N+ KNRY DVVPFD+NRVVLNP KD + S R
Sbjct: 59   IAQEFAHLQASRITPSQMARSCKVALDGVNVNKNRYLDVVPFDQNRVVLNPCKDYRPSAR 118

Query: 825  GYINASFIATSPSETVSRFIATQGPMPNTYKDFWEMVLQYRCPAIVMLTRLVDNYKTEKC 646
            GYINAS I TS S+ +S+FIATQGP+P+T++DFWEM++Q+ CP IVMLTRLVDNYKT KC
Sbjct: 119  GYINASLITTSSSDNISQFIATQGPLPHTFEDFWEMIIQHHCPVIVMLTRLVDNYKTVKC 178

Query: 645  GDYFQAEDGSREFGNICVTTKWIKTTRTSLVLRNLEVKYKESEEPPLSVLHILYPDWPDH 466
            GDYFQAEDG R+FGNI + TKWIKTT TSL+LRNL+V YKE+EE P++VLHI YP+WPDH
Sbjct: 179  GDYFQAEDGPRDFGNISIVTKWIKTTDTSLLLRNLKVGYKEAEEQPMNVLHIQYPEWPDH 238

Query: 465  GVPEDTLAVREIWRRLCSVPPTAGPIVVHCSAGIGRTGTYCTVHNTIQRILAGDMSALDL 286
            GVPEDT+ VREI++R+ +VPP+ GPIVVHCSAGIGRTGTYCT+HNT+QRIL GDMSALD+
Sbjct: 239  GVPEDTIVVREIFKRVYNVPPSLGPIVVHCSAGIGRTGTYCTIHNTVQRILVGDMSALDI 298

Query: 285  VKTISEFRSQRIGMVQTKEQFFYCYVA 205
              T++ FRSQRIGMVQT EQ+F+CY A
Sbjct: 299  ANTVTTFRSQRIGMVQTMEQYFFCYEA 325


>emb|CAJ77612.1| protein tyrosine phosphatase [Fagus sylvatica]
          Length = 330

 Score =  394 bits (1011), Expect = e-107
 Identities = 195/293 (66%), Positives = 229/293 (78%), Gaps = 1/293 (0%)
 Frame = -2

Query: 1026 DKISQTGLISREFDILQTNRMRALEANNRCSVAYSTNNIRKNRYTDVVPFDENRVVLNPY 847
            DK+    ++++EF  LQ NR+   E    C+VA+   N+ KNRYTDVVPFD+NRVVLN  
Sbjct: 39   DKLQMPHILNQEFAHLQANRITPSEMRRSCTVAFDNVNMNKNRYTDVVPFDKNRVVLNSC 98

Query: 846  KDQQ-SDRGYINASFIATSPSETVSRFIATQGPMPNTYKDFWEMVLQYRCPAIVMLTRLV 670
            KD + + +GYINASFI TS SE++S+FIATQGP+P TY+DFWEMV+Q RCP +VMLTRLV
Sbjct: 99   KDYRPAAKGYINASFITTSSSESISQFIATQGPLPQTYEDFWEMVMQNRCPVVVMLTRLV 158

Query: 669  DNYKTEKCGDYFQAEDGSREFGNICVTTKWIKTTRTSLVLRNLEVKYKESEEPPLSVLHI 490
            D  K  KCGDYFQAEDG RE GNI + TKWIKT  TSLVLR+LEVKYKESEE P+SVLHI
Sbjct: 159  D--KMVKCGDYFQAEDGPREIGNIHIVTKWIKTIDTSLVLRHLEVKYKESEEEPMSVLHI 216

Query: 489  LYPDWPDHGVPEDTLAVREIWRRLCSVPPTAGPIVVHCSAGIGRTGTYCTVHNTIQRILA 310
             YP+WPDHGVP DT+AVREI +R   VPP  GP+VVHCSAGIGRTGTYCT+HNTIQRILA
Sbjct: 217  QYPEWPDHGVPNDTVAVREILKRTYHVPPNLGPVVVHCSAGIGRTGTYCTIHNTIQRILA 276

Query: 309  GDMSALDLVKTISEFRSQRIGMVQTKEQFFYCYVAXXXXXXXXXXEYNGHRSS 151
            GDMSAL+LV TIS FRSQRIGMVQT +QF +C+ A          ++N  RSS
Sbjct: 277  GDMSALNLVNTISMFRSQRIGMVQTPDQFRFCFKAIIDELEDLISDFNTERSS 329


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